Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p31380 Brassica napus
Aa31LG8G5120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis
AL3G31500 Arabidopsis lyrata
Aqoxy3G00204 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4RSR2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.583R3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea
AT3G18270 Arabidopsis thaliana
ATR0807G117 Amborella trichopoda
Atru.chr1.1618 Acer truncatum
Atru.chr12.656 Acer truncatum
Atru.chr12.682 Acer truncatum
Atru.chr12.683 Acer truncatum
Atru.chr9.900 Acer truncatum
BcaB06g26914 Brassica carinata
BcaB06g26915 Brassica carinata
BcaC02g10475 Brassica carinata
BcaC04g23227 Brassica carinata
BcaC06g36376 Brassica carinata
BcaC08g44328 Brassica carinata
BcaC08g45100 Brassica carinata
BolC5t32601H Brassica oleracea
BolC5t33477H Brassica oleracea
BolC6t36947H Brassica oleracea
BolC6t37880H Brassica oleracea
BolC9t53984H Brassica oleracea
BraA05t21977Z Brassica rapa
C05p38610 Brassica napus
C05p47680 Brassica napus
C06p17530 Brassica napus
C08p35620 Brassica napus
CAN.G1129.11 Capsicum annuum
CANSAT78G0772 Cannabis sativa
CANSAT80G2380 Cannabis sativa
CARHR093620 Cardamine hirsuta
Carub.0003s1804 Capsella rubella
Ca_11587_v3 Cicer arietinum L.
Cc04_g06880 Coffea canephora
CDE08G0051 Ceratophyllum demersum
Cfa024708 Carpinus fangiana
Ciclev10011789m.g Citrus clementina
CiPaw.15G135000 Carya illinoinensis
CiPaw.16G088800 Carya illinoinensis
ClCG06G014610 Citrullus lanatus
ClCG11G007750 Citrullus lanatus
COL.COLO4_09370 Corchorus olitorius
COL.COLO4_20838 Corchorus olitorius
Cpa.g.sc170.33 Carica papaya
Cpa.g.sc3.467 Carica papaya
CsaV3_1G004010 Cucumis sativus L.
CsaV3_2G033830 Cucumis sativus L.
CSS0018341 Camellia sinensis var. sinensis
CSS0035838 Camellia sinensis var. sinensis
DCAR_000092 Daucus carota
DCAR_000177 Daucus carota
DCAR_011366 Daucus carota
DCAR_011367 Daucus carota
DCAR_011370 Daucus carota
DCAR_011371 Daucus carota
DCAR_011373 Daucus carota
DCAR_011376 Daucus carota
DCAR_015154 Daucus carota
DCAR_024088 Daucus carota
Dinv00811 Davidia involucrata
Dinv12220 Davidia involucrata
Dinv28139 Davidia involucrata
Dinv34796 Davidia involucrata
Duzib084G0471 Durio zibethinus
Duzib138G0550 Durio zibethinus
Duzib205G0622 Durio zibethinus
ECA233G1745 Erigeron canadensis
Eucgr.B00825 Eucalyptus grandis
Eucgr.B00826 Eucalyptus grandis
FAN04G1535 Fragaria x ananassa
FAN08G0774 Fragaria x ananassa
FAN13G1096 Fragaria x ananassa
FAN18G3483 Fragaria x ananassa
FvH4_5g16670 Fragaria vesca
Glyma.05G139300 Glycine max
Glyma.08G094600 Glycine max
Gohir.A07G066800 Gossypium hirsutum
Gohir.A11G165600 Gossypium hirsutum
Gohir.D07G071400 Gossypium hirsutum
Gohir.D11G171700 Gossypium hirsutum
Gorai.001G075300 Gossypium raimondii
GSVIVG01008335001 Vitis vinifera
HanXRQChr17g0559411 Helianthus annuus
Haze_18725 Corylus avellana
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla
HPP92_008849 Vanilla planifolia
HPP92_008863 Vanilla planifolia
Hund02354 Selenicereus undatus
Lalb_Chr00c06g0404671 Lupinus albus
Lalb_Chr13g0293671 Lupinus albus
Lj4g0001453 Lotus japonicus
Lj9C425T3 Lonicera japonica
Lsat_1_v5_gn_8_143241 Lactuca sativa
Manes.01G014900 Manihot esculenta
Manes.02G071200 Manihot esculenta
Mapoly0058s0107 Marchantia polymorpha
MBI09_g25158_MAGBIO Magnolia biondii
MD06G1220000 Malus domestica
MD14G1229600 Malus domestica
MELO3C008155.2 Cucumis melo
MELO3C017324.2 Cucumis melo
Migut.I00409 Erythranthe guttata
MSTRG.11313 Avicennia marina
Nitab4.5_0001986g0030 Nicotiana tabacum
Nitab4.5_0004028g0040 Nicotiana tabacum
Nn2g15201 Nelumbo nucifera
Nn4g22334 Nelumbo nucifera
Nn4g22335 Nelumbo nucifera
Nn4g23948 Nelumbo nucifera
Oeu000985.1 Olea europaea
Os01g0138900 Oryza sativa ssp. japonica
Peaxi162Scf00683g00158 Petunia axillaris
PGR083G1292 Punica granatum
PGSC0003DMG400005732 Solanum tuberosum
Phvul.002G182700 Phaseolus vulgaris
Potri.012G054200 Populus trichocarpa
Potri.015G044400 Populus trichocarpa
Pp3c2_34370 Physcomitrium patens
Pp3s30_70 Physcomitrium patens
PRCOL_00000826 Prasinoderma coloniale
Prupe.5G224400 Prunus persica
Psat0s1333g0160 Pisum sativum
Psat5g132800 Pisum sativum
Psat7g083560 Pisum sativum
PSO017G2643 Papaver somniferum
PSO478G0260 Papaver somniferum
RcHm_v2.0_Chr7g0179451 Rosa chinensis
Rhsim08G0130500 Rhododendron simsii
Rhsim08G0130600 Rhododendron simsii
Sabra12G0038000 Salix brachista
Sabra15G0040700 Salix brachista
Sc04g0003400 Simmondsia chinensis
Sed0011571 Sechium edule
Sed0014968 Sechium edule
SEGI_36538 Sequoiadendron giganteum
SMO146G0146 Selaginella moellendorffii
SMO146G0383 Selaginella moellendorffii
Solyc03g119200.4 Solanum lycopersicum
Solyc08g045760.1 Solanum lycopersicum
Sp3g16390 Schrenkiella parvula
TAR371G0419 Trochodendron aralioides
TAR371G0763 Trochodendron aralioides
TAR426G0005 Trochodendron aralioides
TAR535G0010 Trochodendron aralioides
THA.LOC104820382 Tarenaya hassleriana
Thecc.03G040700 Theobroma cacao
Thecc.04G129000 Theobroma cacao
Thhalv10020846m.g Eutrema salsugineum
Thhalv10022164m.g Eutrema salsugineum
TPR.G26740 Trifolium pratense
TPR.G5108 Trifolium pratense
TWI15G0256 Tripterygium wilfordii
VMungo0251G1679 Vigna mungo
Zm00001eb084840 Zea mays
Zm00001eb124820 Zea mays
Zm00001eb312660 Zea mays
Zm00001eb335570 Zea mays

User provided reference genes

Program Settings