Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p47040 Brassica napus
Aa31LG11G1950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.258 Anthoceros agrestis
Actinidia13581 Actinidia chinensis
Actinidia24997 Actinidia chinensis
Actinidia31776 Actinidia chinensis
Ah.07g207720 Amaranthus hybridus
AL8G38140 Arabidopsis lyrata
Aqoxy1G01638 Aquilegia oxysepala
Aqoxy5G04150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AYL6ZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7NEP8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J8KP6L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea
AT5G61450 Arabidopsis thaliana
ATR0317G048 Amborella trichopoda
Atru.chr1.756 Acer truncatum
AUR62002211 Chenopodium quinoa
AUR62015488 Chenopodium quinoa
BcaC06g33149 Brassica carinata
BcaC06g33234 Brassica carinata
BcaNung02453 Brassica carinata
BolC1t03363H Brassica oleracea
BolC7t44614H Brassica oleracea
BolC7t45034H Brassica oleracea
BraA03t13827Z Brassica rapa
C07p40880 Brassica napus
C07p45120 Brassica napus
CAN.G330.4 Capsicum annuum
CAN.G48.41 Capsicum annuum
CARHR275210 Cardamine hirsuta
Carub.0008s2213 Capsella rubella
Ca_25531_v3 Cicer arietinum L.
CBR_g12525 Chara braunii
Cc02_g04370 Coffea canephora
Ciclev10004769m.g Citrus clementina
CiPaw.04G059200 Carya illinoinensis
ClCG09G013080 Citrullus lanatus
COL.COLO4_14105 Corchorus olitorius
Cpa.g.c29748.2 Carica papaya
Cpa.g.sc111.54 Carica papaya
Cpa.g.sc4200.1 Carica papaya
Cre03.g201000 Chlamydomonas reinhardtii
CsaV3_3G050070 Cucumis sativus L.
CSS0018772 Camellia sinensis var. sinensis
CSS0026342 Camellia sinensis var. sinensis
DCAR_014620 Daucus carota
Dinv06568 Davidia involucrata
Dinv16843 Davidia involucrata
Duzib084G1335 Durio zibethinus
Duzib205G0275 Durio zibethinus
ECA233G5771 Erigeron canadensis
EL10Ac3g05852 Beta vulgaris
Eucgr.H04780 Eucalyptus grandis
FAN01G2714 Fragaria x ananassa
FAN03G0204 Fragaria x ananassa
FAN03G3162 Fragaria x ananassa
FAN06G0557 Fragaria x ananassa
FAN06G1565 Fragaria x ananassa
FAN10G1071 Fragaria x ananassa
FAN10G4258 Fragaria x ananassa
FvH4_2g12100 Fragaria vesca
FvH4_3g27272 Fragaria vesca
FvH4_5g28373 Fragaria vesca
FvH4_7g05310 Fragaria vesca
FvH4_7g27310 Fragaria vesca
FvH4_c2g00051 Fragaria vesca
Glyma.09G229600 Glycine max
Glyma.12G006700 Glycine max
Gohir.A03G059300 Gossypium hirsutum
Gohir.A12G198000 Gossypium hirsutum
Gohir.D03G106600 Gossypium hirsutum
Gohir.D04G050932 Gossypium hirsutum
Gohir.D12G200600 Gossypium hirsutum
Gorai.003G113100 Gossypium raimondii
Gorai.008G215700 Gossypium raimondii
Gorai.009G415200 Gossypium raimondii
Gorai.012G056500 Gossypium raimondii
GSVIVG01014047001 Vitis vinifera
HanXRQChr05g0142531 Helianthus annuus
Haze_13877 Corylus avellana
Haze_13878 Corylus avellana
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla
HPP92_020352 Vanilla planifolia
Hund11832 Selenicereus undatus
Lalb_Chr01g0000341 Lupinus albus
Lj1A979T78 Lonicera japonica
Lj3g0001566 Lotus japonicus
Lj8A43G57 Lonicera japonica
Lsat_1_v5_gn_1_117520 Lactuca sativa
Lsat_1_v5_gn_1_117540 Lactuca sativa
Lsat_1_v5_gn_1_117561 Lactuca sativa
Lsat_1_v5_gn_5_94641 Lactuca sativa
Lsat_1_v5_gn_8_8740 Lactuca sativa
Lsat_1_v5_gn_9_51980 Lactuca sativa
Manes.06G133800 Manihot esculenta
Mapoly0072s0015 Marchantia polymorpha
MD01G1182200 Malus domestica
MD07G1252500 Malus domestica
MD07G1252600 Malus domestica
Medtr1g056720 Medicago truncatula
Medtr4g036835 Medicago truncatula
MELO3C003311.2 Cucumis melo
Migut.F00484 Erythranthe guttata
Migut.L01142 Erythranthe guttata
Nitab4.5_0000262g0110 Nicotiana tabacum
Nitab4.5_0000448g0090 Nicotiana tabacum
Nitab4.5_0002816g0120 Nicotiana tabacum
Nitab4.5_0003490g0020 Nicotiana tabacum
Nitab4.5_0003490g0040 Nicotiana tabacum
Nn1g00980 Nelumbo nucifera
Nn6g33942 Nelumbo nucifera
Oeu028187.2 Olea europaea
Os03g0102400 Oryza sativa ssp. japonica
Os07g0466200 Oryza sativa ssp. japonica
Peaxi162Scf00241g00030 Petunia axillaris
Peaxi162Scf00304g01326 Petunia axillaris
Peaxi162Scf00304g01343 Petunia axillaris
PGR042G3222 Punica granatum
PGSC0003DMG400021593 Solanum tuberosum
Phvul.011G007500 Phaseolus vulgaris
Potri.001G125700 Populus trichocarpa
Potri.003G108000 Populus trichocarpa
Pp3c14_12080 Physcomitrium patens
Pp3c17_11550 Physcomitrium patens
Pp3c2_13380 Physcomitrium patens
PRCOL_00000881 Prasinoderma coloniale
Prupe.2G276000 Prunus persica
Prupe.2G276100 Prunus persica
Psat7g159560 Pisum sativum
PSO210G3536 Papaver somniferum
PSO238G0034 Papaver somniferum
QL09p005405 Quercus lobata
RcHm_v2.0_Chr1g0331961 Rosa chinensis
RcHm_v2.0_Chr1g0374151 Rosa chinensis
Rhsim09G0190900 Rhododendron simsii
Sabra01G0096800 Salix brachista
Sabra03G0074900 Salix brachista
SalBow8G0184 Salvia bowleyana
SalBow8G4519 Salvia bowleyana
Sc19g0002070 Simmondsia chinensis
Sed0010040 Sechium edule
Sed0020354 Sechium edule
SEGI_04441 Sequoiadendron giganteum
SEGI_09779 Sequoiadendron giganteum
SEGI_30601 Sequoiadendron giganteum
SEGI_33806 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01218 Striga asiatica
SHI13981 Sapria himalayana
SHI13982 Sapria himalayana
SMO203G0101 Selaginella moellendorffii
SMO357G0012 Selaginella moellendorffii
Solyc03g093300.3 Solanum lycopersicum
Solyc06g034180.2 Solanum lycopersicum
Sopen03g024080 Solanum pennellii
Sopen06g015930 Solanum pennellii
Sp2g24650 Schrenkiella parvula
TAR636G1879 Trochodendron aralioides
Thecc.03G153900 Theobroma cacao
Thhalv10004229m.g Eutrema salsugineum
TWI39G0359 Tripterygium wilfordii
unitig_46.g18765 Utricularia gibba
vmacro09913 Vaccinium macrocarpon
VMungo1127G0923 Vigna mungo
Zm00001eb404400 Zea mays

User provided reference genes

Program Settings