Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39820 Brassica napus
A10p33670 Brassica napus
Actinidia25149 Actinidia chinensis
AL3G20070 Arabidopsis lyrata
AL6G10960 Arabidopsis lyrata
Aqoxy4G02651 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BL7XQ3 Arachis hypogaea
AT3G09032 Arabidopsis thaliana
AT5G01225 Arabidopsis thaliana
ATR0618G375 Amborella trichopoda
Atru.chr8.2208 Acer truncatum
BcaC05g29637 Brassica carinata
BcaC06g31968 Brassica carinata
BcaC09g48004 Brassica carinata
BcaC09g48049 Brassica carinata
BcaNung06802 Brassica carinata
BcaNung07269 Brassica carinata
BolC1t05478H Brassica oleracea
BolC5t34538H Brassica oleracea
BolC9t60190H Brassica oleracea
BraA01t04320Z Brassica rapa
BraA05t22766Z Brassica rapa
BraA10t45398Z Brassica rapa
C05p58860 Brassica napus
C09p74580 Brassica napus
CAN.G780.3 Capsicum annuum
CANSAT35G0502 Cannabis sativa
CANSAT54G0898 Cannabis sativa
CARHR083380 Cardamine hirsuta
CARHR211560 Cardamine hirsuta
Carub.0003s0817 Capsella rubella
Carub.0006s0066 Capsella rubella
Ca_00329_v3 Cicer arietinum L.
Cc01_g13980 Coffea canephora
Cfa017246 Carpinus fangiana
Ciclev10013109m.g Citrus clementina
Ciclev10029412m.g Citrus clementina
CiPaw.09G207200 Carya illinoinensis
CiPaw.13G080500 Carya illinoinensis
CiPaw.14G060900 Carya illinoinensis
ClCG04G007170 Citrullus lanatus
ClCG10G021920 Citrullus lanatus
COL.COLO4_14571 Corchorus olitorius
Cpa.g.sc163.4 Carica papaya
CsaV3_3G034080 Cucumis sativus L.
CsaV3_4G026060 Cucumis sativus L.
DCAR_007388 Daucus carota
DCAR_015449 Daucus carota
DCAR_018722 Daucus carota
DCAR_024028 Daucus carota
DCAR_028820 Daucus carota
Dinv26880 Davidia involucrata
Dinv37074 Davidia involucrata
Duzib093G0978 Durio zibethinus
Duzib106G0630 Durio zibethinus
Duzib128G0556 Durio zibethinus
Duzib150G0257 Durio zibethinus
Eucgr.K02995 Eucalyptus grandis
FAN02G0664 Fragaria x ananassa
FAN05G3657 Fragaria x ananassa
FAN09G0897 Fragaria x ananassa
FAN14G3430 Fragaria x ananassa
FAN14G4547 Fragaria x ananassa
FvH4_6g11920 Fragaria vesca
Glyma.01G113100 Glycine max
Glyma.03G078400 Glycine max
Glyma.07G146500 Glycine max
Glyma.13G239800 Glycine max
Glyma.15G073400 Glycine max
Glyma.18G197700 Glycine max
Gohir.A01G225900 Gossypium hirsutum
Gohir.A03G049600 Gossypium hirsutum
Gohir.A04G088850 Gossypium hirsutum
Gohir.A05G089700 Gossypium hirsutum
Gohir.A07G102900 Gossypium hirsutum
Gohir.A09G163800 Gossypium hirsutum
Gohir.D01G215600 Gossypium hirsutum
Gohir.D03G117700 Gossypium hirsutum
Gohir.D04G129214 Gossypium hirsutum
Gohir.D05G090600 Gossypium hirsutum
Gohir.D07G106900 Gossypium hirsutum
Gohir.D09G159300 Gossypium hirsutum
Gorai.001G115000 Gossypium raimondii
Gorai.002G261800 Gossypium raimondii
Gorai.003G124100 Gossypium raimondii
Gorai.006G181000 Gossypium raimondii
Gorai.009G093100 Gossypium raimondii
Gorai.012G112300 Gossypium raimondii
Haze_24266 Corylus avellana
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla
Lalb_Chr03g0043081 Lupinus albus
Lalb_Chr13g0291241 Lupinus albus
Lalb_Chr15g0089821 Lupinus albus
Lj6g0009965 Lotus japonicus
Lsat_1_v5_gn_5_172261 Lactuca sativa
Lsat_1_v5_gn_9_20140 Lactuca sativa
Lsat_1_v5_gn_9_35941 Lactuca sativa
Manes.02G121400 Manihot esculenta
Manes.09G103100 Manihot esculenta
MBI05_g30571_MAGBIO Magnolia biondii
MBI06_g42853_MAGBIO Magnolia biondii
MD12G1161500 Malus domestica
Medtr2g013470 Medicago truncatula
Medtr7g067365 Medicago truncatula
MELO3C003231.2 Cucumis melo
MELO3C009185.2 Cucumis melo
Migut.L01999 Erythranthe guttata
Migut.N00891 Erythranthe guttata
MSTRG.10228 Avicennia marina
Nitab4.5_0000102g0150 Nicotiana tabacum
Nn1g02891 Nelumbo nucifera
Nn2g11404 Nelumbo nucifera
Nn2g13635 Nelumbo nucifera
Oeu024626.1 Olea europaea
Oeu030524.1 Olea europaea
Oeu045519.1 Olea europaea
Oeu055173.1 Olea europaea
Peaxi162Scf00056g00201 Petunia axillaris
PGR004G1616 Punica granatum
PGR119G2229 Punica granatum
PGSC0003DMG400004152 Solanum tuberosum
Phvul.006G186000 Phaseolus vulgaris
Phvul.008G106800 Phaseolus vulgaris
Phvul.010G005000 Phaseolus vulgaris
Potri.001G249500 Populus trichocarpa
Potri.006G097700 Populus trichocarpa
Potri.009G043501 Populus trichocarpa
Potri.016G112700 Populus trichocarpa
Prupe.6G271900 Prunus persica
Psat3g130680 Pisum sativum
PSO339G4028 Papaver somniferum
PSO384G2407 Papaver somniferum
QL01p037420 Quercus lobata
QL07p036016 Quercus lobata
RcHm_v2.0_Chr3g0463681 Rosa chinensis
Rhsim04G0131700 Rhododendron simsii
Rhsim13G0071800 Rhododendron simsii
Sabra06G0075200 Salix brachista
Sabra09G0030900 Salix brachista
Sabra16G0108400 Salix brachista
SalBow2G0796 Salvia bowleyana
SalBow4G0303 Salvia bowleyana
SalBow4G1886 Salvia bowleyana
Sed0015935 Sechium edule
Sed0017480 Sechium edule
Sed0021305 Sechium edule
SGA_v2.0_scaffold120G32947 Striga asiatica
SGA_v2.0_scaffold240G44104 Striga asiatica
Solyc06g006090.1 Solanum lycopersicum
Sopen06g002040 Solanum pennellii
Sopen09g007170 Solanum pennellii
Sp3g07460 Schrenkiella parvula
Sp6g40580 Schrenkiella parvula
TAR369G1066 Trochodendron aralioides
TAR623G0525 Trochodendron aralioides
THA.LOC104816214 Tarenaya hassleriana
THA.LOC104823286 Tarenaya hassleriana
THA.LOC104827043 Tarenaya hassleriana
Thecc.05G020400 Theobroma cacao
Thhalv10014915m.g Eutrema salsugineum
Thhalv10022307m.g Eutrema salsugineum
TPR.G1552 Trifolium pratense
TPR.G29052 Trifolium pratense
TWI77G0758 Tripterygium wilfordii
TWI79G1354 Tripterygium wilfordii
VMungo0331G0885 Vigna mungo
VMungo1383G3137 Vigna mungo

User provided reference genes

Program Settings