Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34120 Brassica napus
A07p03760 Brassica napus
A09p11260 Brassica napus
Aa31LG2G14870 Aethionema arabicum
Actinidia17992 Actinidia chinensis
Actinidia26328 Actinidia chinensis
Ah.01g009950 Amaranthus hybridus
Ah.03g140200 Amaranthus hybridus
AL3G50130 Arabidopsis lyrata
Aqoxy1G01703 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea
AT2G17265 Arabidopsis thaliana
AT4G35295 Arabidopsis thaliana
ATR0177G062 Amborella trichopoda
ATR0810G109 Amborella trichopoda
Atru.chr5.3560 Acer truncatum
Atru.chr5.3561 Acer truncatum
AUR62010176 Chenopodium quinoa
AUR62013177 Chenopodium quinoa
BcaB03g16474 Brassica carinata
BcaB03g16477 Brassica carinata
BcaB03g16478 Brassica carinata
BcaB07g31737 Brassica carinata
BcaB08g34717 Brassica carinata
BcaB08g34718 Brassica carinata
BcaB08g35109 Brassica carinata
BcaC01g02941 Brassica carinata
BcaC04g22982 Brassica carinata
BcaC06g34170 Brassica carinata
BcaC06g36249 Brassica carinata
BolC3t18081H Brassica oleracea
BolC7t41016H Brassica oleracea
BolC7t43738H Brassica oleracea
BolC9t54222H Brassica oleracea
BraA06t26345Z Brassica rapa
BraA07t28164Z Brassica rapa
BraA09t36767Z Brassica rapa
C03p58080 Brassica napus
C07p06030 Brassica napus
C07p31950 Brassica napus
C09p13290 Brassica napus
CAN.G5871.1 Capsicum annuum
CANSAT25G0301 Cannabis sativa
CARHR243620 Cardamine hirsuta
CARHR293610 Cardamine hirsuta
Carub.0003s3121 Capsella rubella
Carub.0007s0500 Capsella rubella
Ca_10777_v3 Cicer arietinum L.
Cc11_g00240 Coffea canephora
CDE05G1267 Ceratophyllum demersum
CDE05G2018 Ceratophyllum demersum
Cfa005374 Carpinus fangiana
Ciclev10028700m.g Citrus clementina
CiPaw.05G093400 Carya illinoinensis
CiPaw.06G115200 Carya illinoinensis
ClCG02G003360 Citrullus lanatus
Cpa.g.sc60.14 Carica papaya
Cre02.g082100 Chlamydomonas reinhardtii
Cre02.g082150 Chlamydomonas reinhardtii
Cre02.g082200 Chlamydomonas reinhardtii
Cre02.g082250 Chlamydomonas reinhardtii
CsaV3_7G001970 Cucumis sativus L.
CSS0007201 Camellia sinensis var. sinensis
CSS0030147 Camellia sinensis var. sinensis
DCAR_006270 Daucus carota
Dinv14175 Davidia involucrata
Dinv20762 Davidia involucrata
Duzib052G0175 Durio zibethinus
ECA233G1094 Erigeron canadensis
EL10Ac9g21537 Beta vulgaris
FAN04G2646 Fragaria x ananassa
FAN05G3570 Fragaria x ananassa
FAN05G5401 Fragaria x ananassa
FAN07G1153 Fragaria x ananassa
FAN15G0284 Fragaria x ananassa
FAN15G0610 Fragaria x ananassa
FAN23G0549 Fragaria x ananassa
FAN23G1162 Fragaria x ananassa
FAN24G0296 Fragaria x ananassa
FAN25G3338 Fragaria x ananassa
FAN27G2171 Fragaria x ananassa
FvH4_2g16830 Fragaria vesca
Glyma.14G001000 Glycine max
Gohir.A03G170800 Gossypium hirsutum
Gohir.D02G193900 Gossypium hirsutum
Gorai.005G216700 Gossypium raimondii
GSVIVG01023624001 Vitis vinifera
HanXRQChr16g0515121 Helianthus annuus
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla
HPP92_007738 Vanilla planifolia
Lalb_Chr07g0189301 Lupinus albus
Lalb_Chr12g0208621 Lupinus albus
Lj9P408T30 Lonicera japonica
LjContig00081g0001175 Lotus japonicus
Lsat_1_v5_gn_2_1161 Lactuca sativa
Lsat_1_v5_gn_4_71321 Lactuca sativa
Lsat_1_v5_gn_8_121420 Lactuca sativa
Manes.01G017200 Manihot esculenta
Mapoly0173s0009 Marchantia polymorpha
MBI10_g41732_MAGBIO Magnolia biondii
MBI15_g18193_MAGBIO Magnolia biondii
MBI18_g17319_MAGBIO Magnolia biondii
MCO14G367 Micromonas commoda
MD10G1142000 Malus domestica
Medtr5g099180 Medicago truncatula
MELO3C015708.2 Cucumis melo
Migut.N00847 Erythranthe guttata
MSTRG.25000 Avicennia marina
Nitab4.5_0000129g0030 Nicotiana tabacum
Nitab4.5_0000783g0100 Nicotiana tabacum
Nitab4.5_0008730g0040 Nicotiana tabacum
Nn2g15251 Nelumbo nucifera
Nn7g36283 Nelumbo nucifera
Oeu005953.1 Olea europaea
Os02g0831800 Oryza sativa ssp. japonica
Peaxi162Scf00329g00312 Petunia axillaris
Peaxi162Scf00362g00110 Petunia axillaris
PGR042G2635 Punica granatum
PGSC0003DMG400025309 Solanum tuberosum
Phvul.008G292300 Phaseolus vulgaris
Potri.004G207000 Populus trichocarpa
Potri.009G168400 Populus trichocarpa
Pp3c5_14900 Physcomitrium patens
PRCOL_00006973 Prasinoderma coloniale
Prupe.8G180500 Prunus persica
Psat2g000680 Pisum sativum
Psat2g000800 Pisum sativum
PSO063G5124 Papaver somniferum
PSO541G6356 Papaver somniferum
PSO675G1855 Papaver somniferum
PSO782G1111 Papaver somniferum
QL03p013131 Quercus lobata
QL05p043527 Quercus lobata
QL08p042586 Quercus lobata
RcHm_v2.0_Chr6g0280961 Rosa chinensis
RhsimUnG0022900 Rhododendron simsii
Sabra04G0139300 Salix brachista
Sabra09G0130700 Salix brachista
SalBow7G0905 Salvia bowleyana
Sc08g0002160 Simmondsia chinensis
Sed0021373 Sechium edule
Sed0027682 Sechium edule
SEGI_19463 Sequoiadendron giganteum
SEGI_37911 Sequoiadendron giganteum
SEGI_38009 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39001 Striga asiatica
SGA_v2.0_scaffold36G14389 Striga asiatica
SHI25239 Sapria himalayana
SMO231G0001 Selaginella moellendorffii
SMO351G0181 Selaginella moellendorffii
Solyc04g008760.3 Solanum lycopersicum
Sopen01g054320 Solanum pennellii
Sopen04g003940 Solanum pennellii
Sp3g30610 Schrenkiella parvula
TAR625G0010 Trochodendron aralioides
TAR625G1260 Trochodendron aralioides
THA.LOC104807405 Tarenaya hassleriana
Thecc.02G146400 Theobroma cacao
Thhalv10022738m.g Eutrema salsugineum
TPR.G18636 Trifolium pratense
TPR.G5084 Trifolium pratense
TWI75G1214 Tripterygium wilfordii
unitig_0.g2083 Utricularia gibba
VMungo0331G0717 Vigna mungo
VMungo0647G1050 Vigna mungo
VMungo1215G0968 Vigna mungo

User provided reference genes

Program Settings