Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37490 Brassica napus
A06p39150 Brassica napus
A09p04540 Brassica napus
Aa31sc186G10 Aethionema arabicum
Actinidia23795 Actinidia chinensis
Actinidia30018 Actinidia chinensis
Actinidia34543 Actinidia chinensis
Ah.11g051030 Amaranthus hybridus
AL8G21330 Arabidopsis lyrata
Aqoxy2G03959 Aquilegia oxysepala
AT5G48480 Arabidopsis thaliana
ATR0686G035 Amborella trichopoda
Atru.chr6.3547 Acer truncatum
AUR62008122 Chenopodium quinoa
AUR62028700 Chenopodium quinoa
BcaB07g30020 Brassica carinata
BcaB07g30025 Brassica carinata
BcaC03g17654 Brassica carinata
BcaC04g23773 Brassica carinata
BcaC06g30793 Brassica carinata
BcaC06g31007 Brassica carinata
BolC2t11714H Brassica oleracea
BolC7t44438H Brassica oleracea
BolC9t53412H Brassica oleracea
BraA02t08736Z Brassica rapa
BraA06t26830Z Brassica rapa
BraA09t36089Z Brassica rapa
C02p56560 Brassica napus
C07p39180 Brassica napus
C09p04850 Brassica napus
CAN.G181.39 Capsicum annuum
CANSAT01G0104 Cannabis sativa
CARHR183600 Cardamine hirsuta
Carub.0008s0806 Capsella rubella
Ca_07469_v3 Cicer arietinum L.
Ca_30573_v3 Cicer arietinum L.
Cc01_g16140 Coffea canephora
CDE05G0628 Ceratophyllum demersum
CDE05G1161 Ceratophyllum demersum
Cfa010569 Carpinus fangiana
Cfa011865 Carpinus fangiana
Ciclev10016998m.g Citrus clementina
Ciclev10023033m.g Citrus clementina
Ciclev10023098m.g Citrus clementina
CiPaw.13G055300 Carya illinoinensis
ClCG05G015470 Citrullus lanatus
COL.COLO4_26572 Corchorus olitorius
Cpa.g.sc8.73 Carica papaya
CsaV3_3G046080 Cucumis sativus L.
CSS0019192 Camellia sinensis var. sinensis
DCAR_004767 Daucus carota
DCAR_012646 Daucus carota
DCAR_018624 Daucus carota
Dinv10439 Davidia involucrata
Dinv28812 Davidia involucrata
Duzib133G0243 Durio zibethinus
Duzib138G0271 Durio zibethinus
Duzib138G1045 Durio zibethinus
Duzib147G0221 Durio zibethinus
Duzib168G0485 Durio zibethinus
Duzib170G0075 Durio zibethinus
Duzib205G0826 Durio zibethinus
Duzib211G0475 Durio zibethinus
ECA236G1737 Erigeron canadensis
ECA247G2547 Erigeron canadensis
EL10Ac5g10626 Beta vulgaris
Eucgr.H00726 Eucalyptus grandis
FAN15G3314 Fragaria x ananassa
FAN24G0678 Fragaria x ananassa
FAN27G2858 Fragaria x ananassa
FAN27G3147 Fragaria x ananassa
FvH4_2g17810 Fragaria vesca
Glyma.08G344200 Glycine max
Glyma.14G148600 Glycine max
Glyma.18G152900 Glycine max
Gohir.A07G090200 Gossypium hirsutum
Gohir.A11G142500 Gossypium hirsutum
Gohir.D07G094900 Gossypium hirsutum
Gohir.D11G148800 Gossypium hirsutum
Gorai.001G102200 Gossypium raimondii
Gorai.007G159600 Gossypium raimondii
HanXRQChr08g0231431 Helianthus annuus
HanXRQChr09g0257641 Helianthus annuus
HanXRQChr16g0507911 Helianthus annuus
Haze_03501 Corylus avellana
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla
HPP92_024259 Vanilla planifolia
Hund02794 Selenicereus undatus
Hund09468 Selenicereus undatus
Lalb_Chr01g0021991 Lupinus albus
Lalb_Chr03g0041091 Lupinus albus
Lj1g0015941 Lotus japonicus
Lj2A1117T18 Lonicera japonica
Lj2P1154T27 Lonicera japonica
Lj3g0001126 Lotus japonicus
Lj3g0009756 Lotus japonicus
Lsat_1_v5_gn_8_98041 Lactuca sativa
Manes.12G054100 Manihot esculenta
Mapoly0001s0501 Marchantia polymorpha
MD05G1159600 Malus domestica
MD10G1152100 Malus domestica
Medtr7g052690 Medicago truncatula
Medtr8g011510 Medicago truncatula
MELO3C003732.2 Cucumis melo
Migut.D00732 Erythranthe guttata
Migut.D00735 Erythranthe guttata
Migut.N00664 Erythranthe guttata
MSTRG.18494 Avicennia marina
MSTRG.21303 Avicennia marina
Nitab4.5_0000038g0150 Nicotiana tabacum
Nitab4.5_0002167g0150 Nicotiana tabacum
Nitab4.5_0002311g0050 Nicotiana tabacum
Nitab4.5_0009151g0020 Nicotiana tabacum
Nn1g08255 Nelumbo nucifera
Nn7g37465 Nelumbo nucifera
Oeu003656.1 Olea europaea
Peaxi162Scf00372g00004 Petunia axillaris
Peaxi162Scf00462g00004 Petunia axillaris
Peaxi162Scf00585g01023 Petunia axillaris
Peaxi162Scf00796g00001 Petunia axillaris
Peaxi162Scf01017g00003 Petunia axillaris
PGR083G1064 Punica granatum
PGSC0003DMG400020653 Solanum tuberosum
PGSC0003DMG400027348 Solanum tuberosum
Phvul.008G136900 Phaseolus vulgaris
Potri.002G251200 Populus trichocarpa
Pp3c13_5750 Physcomitrium patens
Prupe.8G190400 Prunus persica
Psat0s337g0040 Pisum sativum
Psat3g151000 Pisum sativum
PSO017G4362 Papaver somniferum
PSO675G4654 Papaver somniferum
QL09p046251 Quercus lobata
RcHm_v2.0_Chr6g0282841 Rosa chinensis
Rhsim01G0248500 Rhododendron simsii
Rhsim13G0052600 Rhododendron simsii
Sabra02G0191000 Salix brachista
Sc17g0001670 Simmondsia chinensis
Sc19g0005500 Simmondsia chinensis
Sed0006210 Sechium edule
SEGI_00481 Sequoiadendron giganteum
SEGI_14551 Sequoiadendron giganteum
SEGI_24806 Sequoiadendron giganteum
SEGI_39221 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12070 Striga asiatica
SGA_v2.0_scaffold624G53238 Striga asiatica
SGA_v2.0_scaffold8G04494 Striga asiatica
SHI10249 Sapria himalayana
SMO146G0354 Selaginella moellendorffii
Solyc06g007610.2 Solanum lycopersicum
Sopen06g002500 Solanum pennellii
Sopen11g003480 Solanum pennellii
Sp2g18850 Schrenkiella parvula
TAR362G0792 Trochodendron aralioides
TAR365G1191 Trochodendron aralioides
TAR633G1997 Trochodendron aralioides
THA.LOC104802646 Tarenaya hassleriana
THA.LOC104818997 Tarenaya hassleriana
THA.LOC104822467 Tarenaya hassleriana
Thecc.01G211100 Theobroma cacao
Thhalv10005050m.g Eutrema salsugineum
TPR.G26804 Trifolium pratense
TWI18G1341 Tripterygium wilfordii
TWI36G1598 Tripterygium wilfordii
unitig_0.g1219 Utricularia gibba
vmacro02815 Vaccinium macrocarpon
vmacro14692 Vaccinium macrocarpon
VMungo1383G2422 Vigna mungo

User provided reference genes

Program Settings