Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p43600 Brassica napus
Aa31LG5G14340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1834 Anthoceros agrestis
Actinidia03947 Actinidia chinensis
Actinidia37791 Actinidia chinensis
Ah.12g059700 Amaranthus hybridus
AL3G13620 Arabidopsis lyrata
Aqoxy1G00553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4I2AVL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX8T8B Arachis hypogaea
AT3G03790 Arabidopsis thaliana
ATR0697G085 Amborella trichopoda
Atru.chr2.1407 Acer truncatum
AUR62036278 Chenopodium quinoa
AUR62039726 Chenopodium quinoa
BcaC05g29906 Brassica carinata
BcaC05g30250 Brassica carinata
BcaC05g30283 Brassica carinata
BolC5t34981H Brassica oleracea
BraA05t23099Z Brassica rapa
C05p63190 Brassica napus
CAN.G170.116 Capsicum annuum
CANSAT78G2348 Cannabis sativa
CARHR077860 Cardamine hirsuta
Carub.0003s0296 Capsella rubella
Ca_08286_v3 Cicer arietinum L.
CBR_g37355 Chara braunii
Cc06_g07240 Coffea canephora
CDE10G0988 Ceratophyllum demersum
Cfa017675 Carpinus fangiana
Ciclev10018636m.g Citrus clementina
CiPaw.10G126100 Carya illinoinensis
ClCG02G007850 Citrullus lanatus
COL.COLO4_32974 Corchorus olitorius
Cpa.g.sc161.2 Carica papaya
Cre02.g089274 Chlamydomonas reinhardtii
CsaV3_2G035890 Cucumis sativus L.
CSS0005542 Camellia sinensis var. sinensis
CSS0022490 Camellia sinensis var. sinensis
DCAR_020662 Daucus carota
Dinv11924 Davidia involucrata
Dinv25097 Davidia involucrata
Duzib128G0769 Durio zibethinus
Duzib177G1146 Durio zibethinus
ECA238G0084 Erigeron canadensis
EL10Ac5g11767 Beta vulgaris
Eucgr.A02119 Eucalyptus grandis
FAN23G2269 Fragaria x ananassa
FAN26G1663 Fragaria x ananassa
FvH4_1g28360 Fragaria vesca
Glyma.16G038900 Glycine max
Glyma.19G113700 Glycine max
Gohir.A04G063985 Gossypium hirsutum
Gohir.A04G120200 Gossypium hirsutum
Gohir.A11G197325 Gossypium hirsutum
Gohir.A11G233000 Gossypium hirsutum
Gohir.A13G165100 Gossypium hirsutum
Gohir.A13G182600 Gossypium hirsutum
Gohir.D02G099701 Gossypium hirsutum
Gohir.D02G100000 Gossypium hirsutum
Gohir.D02G100001 Gossypium hirsutum
Gohir.D03G046700 Gossypium hirsutum
Gohir.D03G090000 Gossypium hirsutum
Gohir.D07G139500 Gossypium hirsutum
Gohir.D08G141700 Gossypium hirsutum
Gohir.D09G044750 Gossypium hirsutum
Gohir.D09G057401 Gossypium hirsutum
Gohir.D10G031000 Gossypium hirsutum
Gohir.D10G193750 Gossypium hirsutum
Gohir.D10G200650 Gossypium hirsutum
Gohir.D11G104600 Gossypium hirsutum
Gohir.D11G244200 Gossypium hirsutum
Gohir.D13G104300 Gossypium hirsutum
Gohir.D13G168000 Gossypium hirsutum
Gohir.D13G171500 Gossypium hirsutum
Gohir.D13G173925 Gossypium hirsutum
Gorai.005G091800 Gossypium raimondii
Gorai.005G145400 Gossypium raimondii
Gorai.006G065700 Gossypium raimondii
Gorai.007G111900 Gossypium raimondii
Gorai.007G259700 Gossypium raimondii
Gorai.008G213700 Gossypium raimondii
Gorai.010G050700 Gossypium raimondii
Gorai.011G131900 Gossypium raimondii
Gorai.012G030100 Gossypium raimondii
Gorai.013G083400 Gossypium raimondii
Gorai.013G194200 Gossypium raimondii
Gorai.N008400 Gossypium raimondii
GSVIVG01022462001 Vitis vinifera
HanXRQChr14g0453121 Helianthus annuus
Haze_20474 Corylus avellana
HPP92_028052 Vanilla planifolia
Hund10817 Selenicereus undatus
Lalb_Chr14g0364611 Lupinus albus
Lj1g0011347 Lotus japonicus
Lj2A418T70 Lonicera japonica
Lsat_1_v5_gn_2_103941 Lactuca sativa
Manes.09G139100 Manihot esculenta
Mapoly0007s0178 Marchantia polymorpha
Mapoly0082s0025 Marchantia polymorpha
MBI11_g07706_MAGBIO Magnolia biondii
MCO08G113 Micromonas commoda
MD12G1006900 Malus domestica
MD14G1004600 Malus domestica
Medtr7g086050 Medicago truncatula
MELO3C024751.2 Cucumis melo
Migut.J00760 Erythranthe guttata
MSTRG.5924 Avicennia marina
Nitab4.5_0001355g0010 Nicotiana tabacum
Nitab4.5_0010528g0010 Nicotiana tabacum
Nitab4.5_0022463g0010 Nicotiana tabacum
Nn1g08427 Nelumbo nucifera
Nn2g14481 Nelumbo nucifera
Oeu029553.1 Olea europaea
Oeu029554.1 Olea europaea
Os07g0165200 Oryza sativa ssp. japonica
Peaxi162Scf00061g00247 Petunia axillaris
PGR042G0202 Punica granatum
PGSC0003DMG400005593 Solanum tuberosum
Phvul.001G113200 Phaseolus vulgaris
Potri.013G055300 Populus trichocarpa
Pp3c8_24330 Physcomitrium patens
Prupe.7G007400 Prunus persica
Psat0s5023g0080 Pisum sativum
Psat1g054520 Pisum sativum
Psat3g053200 Pisum sativum
Psat3g053440 Pisum sativum
Psat3g087720 Pisum sativum
Psat3g087760 Pisum sativum
Psat5g115680 Pisum sativum
PSO339G3394 Papaver somniferum
PSO384G1703 Papaver somniferum
QL07p018789 Quercus lobata
QL09p009017 Quercus lobata
QL09p009056 Quercus lobata
RcHm_v2.0_Chr3g0496671 Rosa chinensis
Rhsim03G0054800 Rhododendron simsii
Sabra13G0049600 Salix brachista
SalBow3G0054 Salvia bowleyana
Sc01g0005150 Simmondsia chinensis
Sed0003216 Sechium edule
SEGI_36942 Sequoiadendron giganteum
SEGI_41481 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31648 Striga asiatica
SHI13905 Sapria himalayana
SMO367G1027 Selaginella moellendorffii
Solyc01g056570.3 Solanum lycopersicum
Sopen01g020500 Solanum pennellii
Sp3g02770 Schrenkiella parvula
TAR633G0301 Trochodendron aralioides
TAR633G1831 Trochodendron aralioides
THA.LOC104820785 Tarenaya hassleriana
Thecc.05G246800 Theobroma cacao
Thhalv10019953m.g Eutrema salsugineum
TPR.G1836 Trifolium pratense
TPR.G1885 Trifolium pratense
TPR.G31024 Trifolium pratense
TPR.G39963 Trifolium pratense
TWI32G0579 Tripterygium wilfordii
TWI60G0668 Tripterygium wilfordii
unitig_27.g24735 Utricularia gibba
vmacro07548 Vaccinium macrocarpon
VMungo1383G3152 Vigna mungo
Zm00001eb153510 Zea mays
Zm00001eb188870 Zea mays
Zm00001eb190210 Zea mays
Zm00001eb196450 Zea mays
Zm00001eb300770 Zea mays

User provided reference genes

Program Settings