Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41030 Brassica napus
A06p34250 Brassica napus
A09p07020 Brassica napus
Aa31LG11G2750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4013 Anthoceros agrestis
Actinidia04067 Actinidia chinensis
Actinidia04331 Actinidia chinensis
Ah.01g012690 Amaranthus hybridus
AL1G29290 Arabidopsis lyrata
AL2G24680 Arabidopsis lyrata
AL6G34550 Arabidopsis lyrata
AL8G16830 Arabidopsis lyrata
AL8G24780 Arabidopsis lyrata
Aqoxy3G04291 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8BKN44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8X8S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VLL77W Arachis hypogaea
AT5G23290 Arabidopsis thaliana
ATR0618G284 Amborella trichopoda
Atru.chr11.1114 Acer truncatum
AUR62017728 Chenopodium quinoa
AUR62032946 Chenopodium quinoa
AUR62032953 Chenopodium quinoa
BcaB04g19880 Brassica carinata
BcaC04g23487 Brassica carinata
BolC7t44950H Brassica oleracea
BolC9t53699H Brassica oleracea
BraA06t26357Z Brassica rapa
BraA09t36350Z Brassica rapa
C07p44270 Brassica napus
C09p07830 Brassica napus
CAN.G282.46 Capsicum annuum
CANSAT78G1084 Cannabis sativa
CARHR190250 Cardamine hirsuta
Carub.0006s2106 Capsella rubella
Ca_11255_v3 Cicer arietinum L.
Cc00_g07040 Coffea canephora
CDE02G2963 Ceratophyllum demersum
CDE04G0710 Ceratophyllum demersum
Cfa008767 Carpinus fangiana
Ciclev10032992m.g Citrus clementina
CiPaw.06G062100 Carya illinoinensis
ClCG01G008100 Citrullus lanatus
COL.COLO4_33086 Corchorus olitorius
Cpa.g.sc60.76 Carica papaya
Cre12.g523150 Chlamydomonas reinhardtii
CsaV3_5G020730 Cucumis sativus L.
CSS0001435 Camellia sinensis var. sinensis
DCAR_023468 Daucus carota
Dinv17642 Davidia involucrata
Duzib052G1226 Durio zibethinus
Duzib132G0203 Durio zibethinus
Duzib132G0545 Durio zibethinus
Duzib132G0858 Durio zibethinus
ECA232G2799 Erigeron canadensis
EL10Ac9g22978 Beta vulgaris
Eucgr.J00883 Eucalyptus grandis
FAN03G0273 Fragaria x ananassa
FAN03G3278 Fragaria x ananassa
FAN03G3288 Fragaria x ananassa
FAN07G0046 Fragaria x ananassa
FAN07G1220 Fragaria x ananassa
FAN10G1077 Fragaria x ananassa
FAN10G4155 Fragaria x ananassa
FAN12G1261 Fragaria x ananassa
FAN15G1018 Fragaria x ananassa
FAN17G0592 Fragaria x ananassa
FAN17G2528 Fragaria x ananassa
FAN23G3078 Fragaria x ananassa
FvH4_4g37090 Fragaria vesca
Glyma.10G286000 Glycine max
Glyma.20G103300 Glycine max
Gohir.A01G012400 Gossypium hirsutum
Gohir.A01G178033 Gossypium hirsutum
Gohir.D01G013600 Gossypium hirsutum
Gohir.D01G168833 Gossypium hirsutum
Gorai.002G015400 Gossypium raimondii
Gorai.002G209700 Gossypium raimondii
GSVIVG01026144001 Vitis vinifera
HanXRQChr04g0111871 Helianthus annuus
Haze_11779 Corylus avellana
Hma1.2p1_0513F.1_g169420 Hydrangea macrophylla
HPP92_005060 Vanilla planifolia
Hund24383 Selenicereus undatus
Lalb_Chr06g0163921 Lupinus albus
Lj3A847T45 Lonicera japonica
Lj5g0004809 Lotus japonicus
Lj9A327T34 Lonicera japonica
Lsat_1_v5_gn_4_64581 Lactuca sativa
Manes.11G108400 Manihot esculenta
Mapoly0041s0007 Marchantia polymorpha
MBI06_g27498_MAGBIO Magnolia biondii
MBI19_g31737_MAGBIO Magnolia biondii
MBI19_g48155_MAGBIO Magnolia biondii
MCO07G569 Micromonas commoda
MD13G1003600 Malus domestica
MD16G1003800 Malus domestica
Medtr1g114500 Medicago truncatula
MELO3C000273.2 Cucumis melo
MELO3C033736.2 Cucumis melo
Migut.E00685 Erythranthe guttata
MSTRG.13679 Avicennia marina
Nitab4.5_0000069g0160 Nicotiana tabacum
Nitab4.5_0013217g0020 Nicotiana tabacum
Nn3g18605 Nelumbo nucifera
Oeu013194.1 Olea europaea
Oeu013195.1 Olea europaea
Oeu041209.1 Olea europaea
Os10g0488100 Oryza sativa ssp. japonica
Peaxi162Scf00021g02223 Petunia axillaris
PGR044G1895 Punica granatum
PGSC0003DMG400016397 Solanum tuberosum
Phvul.007G014900 Phaseolus vulgaris
Potri.005G090100 Populus trichocarpa
Potri.007G074042 Populus trichocarpa
Pp3c17_13260 Physcomitrium patens
Pp3c1_32320 Physcomitrium patens
PRCOL_00006790 Prasinoderma coloniale
Prupe.1G348800 Prunus persica
Psat6g233960 Pisum sativum
PSO017G5121 Papaver somniferum
PSO170G6579 Papaver somniferum
RcHm_v2.0_Chr1g0343381 Rosa chinensis
RcHm_v2.0_Chr2g0169341 Rosa chinensis
RcHm_v2.0_Chr3g0478071 Rosa chinensis
RcHm_v2.0_Chr4g0389221 Rosa chinensis
RcHm_v2.0_Chr4g0391031 Rosa chinensis
RcHm_v2.0_Chr4g0391701 Rosa chinensis
RcHm_v2.0_Chr4g0446851 Rosa chinensis
RcHm_v2.0_Chr5g0039981 Rosa chinensis
RcHm_v2.0_Chr5g0067401 Rosa chinensis
RcHm_v2.0_Chr5g0070771 Rosa chinensis
RcHm_v2.0_Chr6g0253901 Rosa chinensis
RcHm_v2.0_Chr6g0266371 Rosa chinensis
RcHm_v2.0_Chr6g0274601 Rosa chinensis
Rhsim09G0069500 Rhododendron simsii
Sabra05G0074200 Salix brachista
Sabra07G0062100 Salix brachista
SalBow2G0865 Salvia bowleyana
SalBow3G1738 Salvia bowleyana
SalBow6G0263 Salvia bowleyana
SalBow6G4331 Salvia bowleyana
Sc26g0002050 Simmondsia chinensis
Sed0003164 Sechium edule
Sed0018067 Sechium edule
SEGI_18337 Sequoiadendron giganteum
SEGI_37490 Sequoiadendron giganteum
SGA_v2.0_scaffold256G45657 Striga asiatica
SGA_v2.0_scaffold358G49836 Striga asiatica
SHI21211 Sapria himalayana
SMO114G0084 Selaginella moellendorffii
Solyc01g008270.3 Solanum lycopersicum
Sopen01g003790 Solanum pennellii
Sp2g23860 Schrenkiella parvula
TAR371G0536 Trochodendron aralioides
TAR629G0713 Trochodendron aralioides
TAR629G3528 Trochodendron aralioides
THA.LOC104800677 Tarenaya hassleriana
THA.LOC104818379 Tarenaya hassleriana
Thecc.02G156600 Theobroma cacao
Thhalv10005074m.g Eutrema salsugineum
TPR.G4058 Trifolium pratense
TWI74G0522 Tripterygium wilfordii
TWI77G0364 Tripterygium wilfordii
unitig_699.g19553 Utricularia gibba
vmacro15987 Vaccinium macrocarpon
VMungo0720G0328 Vigna mungo
Zm00001eb045320 Zea mays

User provided reference genes

Program Settings