Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10860 Brassica napus
A08p31810 Brassica napus
A09p36790 Brassica napus
Aa31LG1G290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1674 Anthoceros agrestis
Actinidia12400 Actinidia chinensis
Actinidia26742 Actinidia chinensis
Actinidia36617 Actinidia chinensis
Actinidia36618 Actinidia chinensis
Ah.05g168430 Amaranthus hybridus
AL1G26830 Arabidopsis lyrata
AL7G45370 Arabidopsis lyrata
Aqoxy2G01924 Aquilegia oxysepala
Aqoxy3G02388 Aquilegia oxysepala
Aqoxy5G02471 Aquilegia oxysepala
Aqoxy5G02658 Aquilegia oxysepala
Aqoxy5G02966 Aquilegia oxysepala
Aqoxy6G01744 Aquilegia oxysepala
Aqoxy6G01748 Aquilegia oxysepala
Aqoxy7G02277 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GF1W8W Arachis hypogaea
AT1G14810 Arabidopsis thaliana
ATR0763G027 Amborella trichopoda
Atru.chr11.900 Acer truncatum
AUR62015160 Chenopodium quinoa
AUR62017612 Chenopodium quinoa
BcaB02g06550 Brassica carinata
BcaB03g13081 Brassica carinata
BcaC04g20775 Brassica carinata
BcaC05g25401 Brassica carinata
BcaC07g38762 Brassica carinata
BolC5t30019H Brassica oleracea
BolC8t49319H Brassica oleracea
BolC8t52095H Brassica oleracea
BraA06t24264Z Brassica rapa
BraA08t35103Z Brassica rapa
BraA09t39195Z Brassica rapa
BraSC56t46400Z Brassica rapa
C05p12750 Brassica napus
C05p12760 Brassica napus
C05p12790 Brassica napus
C08p16920 Brassica napus
C08p45410 Brassica napus
C09p39400 Brassica napus
CAN.G282.120 Capsicum annuum
CANSAT78G0088 Cannabis sativa
CARHR015340 Cardamine hirsuta
Carub.0001s1460 Capsella rubella
Ca_17252_v3 Cicer arietinum L.
CBR_g30041 Chara braunii
CBR_g69675 Chara braunii
Cc11_g06980 Coffea canephora
CDE07G1395 Ceratophyllum demersum
CDE12G0826 Ceratophyllum demersum
Cfa015032 Carpinus fangiana
Cfa024397 Carpinus fangiana
Ciclev10015633m.g Citrus clementina
CiPaw.06G053400 Carya illinoinensis
ClCG07G005480 Citrullus lanatus
COL.COLO4_27642 Corchorus olitorius
Cpa.g.sc2.184 Carica papaya
Cre09.g389689 Chlamydomonas reinhardtii
CsaV3_5G014420 Cucumis sativus L.
CsaV3_5G014440 Cucumis sativus L.
DCAR_002675 Daucus carota
DCAR_022139 Daucus carota
Dinv18907 Davidia involucrata
Dinv26357 Davidia involucrata
Duzib248G1338 Durio zibethinus
Duzib251G0717 Durio zibethinus
ECA233G3753 Erigeron canadensis
EL10Ac9g22864 Beta vulgaris
Eucgr.B03437 Eucalyptus grandis
FAN07G0058 Fragaria x ananassa
FAN07G1238 Fragaria x ananassa
FAN12G0660 Fragaria x ananassa
FAN17G0395 Fragaria x ananassa
FAN22G0209 Fragaria x ananassa
FvH4_4g33450 Fragaria vesca
Glyma.05G240700 Glycine max
Glyma.08G047800 Glycine max
Gohir.A12G154900 Gossypium hirsutum
Gohir.A13G026900 Gossypium hirsutum
Gohir.D12G158100 Gossypium hirsutum
Gohir.D13G025700 Gossypium hirsutum
Gorai.008G170900 Gossypium raimondii
Gorai.013G028900 Gossypium raimondii
GSVIVG01011646001 Vitis vinifera
HanXRQChr06g0171081 Helianthus annuus
HanXRQChr08g0220351 Helianthus annuus
HanXRQChr12g0364941 Helianthus annuus
HanXRQChr17g0555841 Helianthus annuus
Haze_10865 Corylus avellana
HPP92_001024 Vanilla planifolia
Hund08335 Selenicereus undatus
Lalb_Chr05g0222081 Lupinus albus
Lalb_Chr09g0330781 Lupinus albus
Lalb_Chr16g0387441 Lupinus albus
Lj4g0025833 Lotus japonicus
Lj6A736T83 Lonicera japonica
LjContig00081g0015221 Lotus japonicus
Lsat_1_v5_gn_8_35340 Lactuca sativa
Manes.15G135500 Manihot esculenta
Mapoly0086s0044 Marchantia polymorpha
MBI05_g37451_MAGBIO Magnolia biondii
MCO01G646 Micromonas commoda
MCO09G222 Micromonas commoda
MD13G1019500 Malus domestica
MD13G1041100 Malus domestica
MD16G1017700 Malus domestica
Medtr8g105860 Medicago truncatula
MELO3C010427.2 Cucumis melo
Migut.E00492 Erythranthe guttata
MSTRG.13631 Avicennia marina
MSTRG.2121 Avicennia marina
Nitab4.5_0000198g0090 Nicotiana tabacum
Nitab4.5_0000640g0100 Nicotiana tabacum
Nn3g18412 Nelumbo nucifera
Nn4g24652 Nelumbo nucifera
Oeu044002.1 Olea europaea
Os03g0760700 Oryza sativa ssp. japonica
Peaxi162Scf00275g00215 Petunia axillaris
PGR102G3065 Punica granatum
PGSC0003DMG400022796 Solanum tuberosum
Phvul.002G323900 Phaseolus vulgaris
Potri.008G135700 Populus trichocarpa
Potri.010G105000 Populus trichocarpa
Potri.010G105300 Populus trichocarpa
Pp3c5_10760 Physcomitrium patens
PRCOL_00000291 Prasinoderma coloniale
Prupe.1G334400 Prunus persica
Psat4g004640 Pisum sativum
PSO302G0185 Papaver somniferum
PSO541G1847 Papaver somniferum
QL03p036195 Quercus lobata
QL03p036261 Quercus lobata
RcHm_v2.0_Chr2g0166251 Rosa chinensis
RcHm_v2.0_Chr4g0442761 Rosa chinensis
Rhsim09G0088900 Rhododendron simsii
Sabra08G0103700 Salix brachista
SalBow2G3345 Salvia bowleyana
Sc17g0004200 Simmondsia chinensis
Sed0000427 Sechium edule
Sed0023691 Sechium edule
SEGI_30189 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35733 Striga asiatica
SGA_v2.0_scaffold23G10178 Striga asiatica
SMO119G0035 Selaginella moellendorffii
Solyc01g005250.4 Solanum lycopersicum
Sopen01g001280 Solanum pennellii
Sp1g13250 Schrenkiella parvula
TAR371G0933 Trochodendron aralioides
TAR622G1230 Trochodendron aralioides
TAR629G0578 Trochodendron aralioides
TAR629G0842 Trochodendron aralioides
TAR629G1713 Trochodendron aralioides
TAR629G3246 Trochodendron aralioides
TAR633G1096 Trochodendron aralioides
THA.LOC104805088 Tarenaya hassleriana
THA.LOC104824123 Tarenaya hassleriana
Thecc.02G309700 Theobroma cacao
Thhalv10007952m.g Eutrema salsugineum
TPR.G19271 Trifolium pratense
TWI74G0333 Tripterygium wilfordii
unitig_27.g25162 Utricularia gibba
unitig_29.g31883 Utricularia gibba
VMungo0251G0500 Vigna mungo
Zm00001eb214360 Zea mays

User provided reference genes

Program Settings