Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22640 Brassica napus
Aa31LG4G12950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4361 Anthoceros agrestis
Actinidia21828 Actinidia chinensis
Actinidia24435 Actinidia chinensis
Ah.08g217310 Amaranthus hybridus
AL5G21340 Arabidopsis lyrata
Aqoxy7G00940 Aquilegia oxysepala
Aqoxy7G04168 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.82J223 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B45F8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BBC6WZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W70I1I Arachis hypogaea
AT3G43240 Arabidopsis thaliana
ATR0099G075 Amborella trichopoda
Atru.chr7.1779 Acer truncatum
Atru.chr7.1780 Acer truncatum
AUR62001416 Chenopodium quinoa
AUR62025624 Chenopodium quinoa
BcaB01g01229 Brassica carinata
BcaC01g02109 Brassica carinata
BolC3t19092H Brassica oleracea
BraA06t25350Z Brassica rapa
CAN.G1721.2 Capsicum annuum
CANSAT56G2968 Cannabis sativa
CARHR153440 Cardamine hirsuta
Carub.0005s0906 Capsella rubella
Ca_02284_v3 Cicer arietinum L.
Ca_23428_v3 Cicer arietinum L.
CBR_g66811 Chara braunii
Cc04_g00810 Coffea canephora
CDE04G3533 Ceratophyllum demersum
CDE06G0638 Ceratophyllum demersum
CDE06G2764 Ceratophyllum demersum
Cfa002934 Carpinus fangiana
Cfa003467 Carpinus fangiana
Ciclev10007563m.g Citrus clementina
CiPaw.01G212300 Carya illinoinensis
CiPaw.02G131700 Carya illinoinensis
ClCG07G014320 Citrullus lanatus
ClCG09G001310 Citrullus lanatus
COL.COLO4_21198 Corchorus olitorius
Cpa.g.sc82.51 Carica papaya
Cre10.g429880 Chlamydomonas reinhardtii
CsaV3_3G030980 Cucumis sativus L.
CsaV3_7G034010 Cucumis sativus L.
CSS0000587 Camellia sinensis var. sinensis
CSS0038823 Camellia sinensis var. sinensis
DCAR_016092 Daucus carota
Dinv20389 Davidia involucrata
Duzib150G0120 Durio zibethinus
Duzib168G0770 Durio zibethinus
Duzib187G1712 Durio zibethinus
ECA232G2871 Erigeron canadensis
EL10Ac7g16483 Beta vulgaris
Eucgr.C00764 Eucalyptus grandis
Eucgr.I02158 Eucalyptus grandis
FAN02G2730 Fragaria x ananassa
FAN05G1825 Fragaria x ananassa
FAN09G1853 Fragaria x ananassa
FAN14G4832 Fragaria x ananassa
FvH4_6g35710 Fragaria vesca
Glyma.07G045100 Glycine max
Glyma.09G074300 Glycine max
Glyma.16G013100 Glycine max
Glyma.U031325 Glycine max
Gohir.A05G036600 Gossypium hirsutum
Gohir.A06G084100 Gossypium hirsutum
Gohir.A07G017500 Gossypium hirsutum
Gohir.D05G038100 Gossypium hirsutum
Gohir.D06G082300 Gossypium hirsutum
Gohir.D07G017300 Gossypium hirsutum
Gorai.001G018000 Gossypium raimondii
Gorai.009G038600 Gossypium raimondii
Gorai.010G095800 Gossypium raimondii
GSVIVG01015005001 Vitis vinifera
GSVIVG01016680001 Vitis vinifera
HanXRQChr09g0277221 Helianthus annuus
Haze_16129 Corylus avellana
Haze_26074 Corylus avellana
Hma1.2p1_0229F.1_g097030 Hydrangea macrophylla
HPP92_019289 Vanilla planifolia
Hund05707 Selenicereus undatus
Lalb_Chr04g0253891 Lupinus albus
Lalb_Chr08g0232811 Lupinus albus
Lalb_Chr17g0343311 Lupinus albus
Lalb_Chr23g0276141 Lupinus albus
Lj3g0000905 Lotus japonicus
Lj5A30T66 Lonicera japonica
Lj6g0016067 Lotus japonicus
Lsat_1_v5_gn_4_92081 Lactuca sativa
Manes.03G045300 Manihot esculenta
Manes.16G089900 Manihot esculenta
Mapoly0094s0004 Marchantia polymorpha
MBI13_g01684_MAGBIO Magnolia biondii
MCO07G528 Micromonas commoda
MD09G1173700 Malus domestica
MD17G1153300 Malus domestica
Medtr2g044550 Medicago truncatula
Medtr8g022980 Medicago truncatula
Medtr8g038730 Medicago truncatula
MELO3C022696.2 Cucumis melo
MELO3C024313.2 Cucumis melo
Migut.I01126 Erythranthe guttata
Nitab4.5_0000357g0090 Nicotiana tabacum
Nitab4.5_0004589g0030 Nicotiana tabacum
Nn5g27342 Nelumbo nucifera
Nn6g35715 Nelumbo nucifera
Oeu028234.1 Olea europaea
Oeu059024.1 Olea europaea
Os08g0361000 Oryza sativa ssp. japonica
Os08g0451400 Oryza sativa ssp. japonica
Os08g0451500 Oryza sativa ssp. japonica
Os08g0451700 Oryza sativa ssp. japonica
Os09g0434000 Oryza sativa ssp. japonica
Os09g0434100 Oryza sativa ssp. japonica
Peaxi162Scf00177g00619 Petunia axillaris
PGR044G2279 Punica granatum
PGR142G3683 Punica granatum
PGSC0003DMG400028852 Solanum tuberosum
Phvul.009G223200 Phaseolus vulgaris
Phvul.010G123900 Phaseolus vulgaris
Potri.006G135500 Populus trichocarpa
Potri.018G064500 Populus trichocarpa
Pp3c15_1350 Physcomitrium patens
Pp3c6_26590 Physcomitrium patens
Prupe.3G031800 Prunus persica
Psat1g137920 Pisum sativum
Psat4g165840 Pisum sativum
PSO135G0149 Papaver somniferum
PSO724G0293 Papaver somniferum
QL05p001473 Quercus lobata
QL05p001749 Quercus lobata
QL11p003182 Quercus lobata
RcHm_v2.0_Chr2g0147711 Rosa chinensis
Rhsim08G0243800 Rhododendron simsii
Sabra06G0106200 Salix brachista
Sabra18G0057200 Salix brachista
Sc15g0000780 Simmondsia chinensis
Sed0001277 Sechium edule
Sed0013084 Sechium edule
Sed0013718 Sechium edule
SEGI_01121 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23915 Striga asiatica
SMO133G0025 Selaginella moellendorffii
Solyc12g049570.3 Solanum lycopersicum
Sopen12g024040 Solanum pennellii
Sp5g18450 Schrenkiella parvula
TAR383G0322 Trochodendron aralioides
TAR383G0549 Trochodendron aralioides
TAR624G1175 Trochodendron aralioides
TAR626G0374 Trochodendron aralioides
THA.LOC104799604 Tarenaya hassleriana
Thecc.09G069400 Theobroma cacao
Thhalv10002415m.g Eutrema salsugineum
TPR.G18148 Trifolium pratense
TPR.G26875 Trifolium pratense
TWI34G1001 Tripterygium wilfordii
TWI63G0110 Tripterygium wilfordii
unitig_26.g8917 Utricularia gibba
unitig_749.g14036 Utricularia gibba
unitig_749.g14037 Utricularia gibba
vmacro15080 Vaccinium macrocarpon
VMungo0331G1133 Vigna mungo
VMungo1309G2772 Vigna mungo
Zm00001eb040700 Zea mays
Zm00001eb099960 Zea mays
Zm00001eb313820 Zea mays

User provided reference genes

Program Settings