Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13210 Brassica napus
A07p13220 Brassica napus
A07p13260 Brassica napus
A08p27710 Brassica napus
A09p40450 Brassica napus
A10p05580 Brassica napus
Aa31LG7G8130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1084 Anthoceros agrestis
Actinidia31179 Actinidia chinensis
Ah.01g005530 Amaranthus hybridus
AL1G17150 Arabidopsis lyrata
AL1G38470 Arabidopsis lyrata
AL1G38480 Arabidopsis lyrata
AL1G38490 Arabidopsis lyrata
AL1G38500 Arabidopsis lyrata
AL8G21080 Arabidopsis lyrata
AL8G21090 Arabidopsis lyrata
Aqoxy3G03270 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08CHDU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VAP5EU Arachis hypogaea
AT1G07040 Arabidopsis thaliana
AT1G27020 Arabidopsis thaliana
AT1G27030 Arabidopsis thaliana
ATR1120G161 Amborella trichopoda
Atru.chr11.1849 Acer truncatum
AUR62026251 Chenopodium quinoa
AUR62026441 Chenopodium quinoa
AUR62026443 Chenopodium quinoa
BcaB03g11982 Brassica carinata
BcaB03g14099 Brassica carinata
BcaB03g14100 Brassica carinata
BcaB06g28798 Brassica carinata
BcaC05g24668 Brassica carinata
BcaC05g26350 Brassica carinata
BcaC06g35098 Brassica carinata
BcaC06g35100 Brassica carinata
BcaC06g35101 Brassica carinata
BcaC07g39255 Brassica carinata
BolC4t27868H Brassica oleracea
BolC5t29284H Brassica oleracea
BolC5t31091H Brassica oleracea
BolC7t42493H Brassica oleracea
BolC7t42494H Brassica oleracea
BolC7t42500H Brassica oleracea
BolC7t42503H Brassica oleracea
BolC8t49896H Brassica oleracea
BraA07t29093Z Brassica rapa
BraA07t29094Z Brassica rapa
BraA07t29096Z Brassica rapa
BraA08t34706Z Brassica rapa
BraA09t39542Z Brassica rapa
BraA10t42819Z Brassica rapa
C03p47090 Brassica napus
C05p05130 Brassica napus
C05p23720 Brassica napus
C07p19800 Brassica napus
C07p19810 Brassica napus
C07p19830 Brassica napus
C07p19840 Brassica napus
C07p19850 Brassica napus
C08p22580 Brassica napus
CAN.G279.12 Capsicum annuum
CAN.G683.6 Capsicum annuum
CANSAT64G2557 Cannabis sativa
CARHR006730 Cardamine hirsuta
CARHR024890 Cardamine hirsuta
CARHR024900 Cardamine hirsuta
Carub.0001s0633 Capsella rubella
Carub.0001s2394 Capsella rubella
Carub.0001s2395 Capsella rubella
Ca_04743_v3 Cicer arietinum L.
Cc11_g13440 Coffea canephora
CDE06G2220 Ceratophyllum demersum
Cfa009032 Carpinus fangiana
Ciclev10031724m.g Citrus clementina
CiPaw.05G139700 Carya illinoinensis
ClCG08G009010 Citrullus lanatus
COL.COLO4_07925 Corchorus olitorius
Cpa.g.sc5.274 Carica papaya
Cre07.g342800 Chlamydomonas reinhardtii
CsaV3_6G036150 Cucumis sativus L.
CSS0011407 Camellia sinensis var. sinensis
DCAR_027386 Daucus carota
Dinv24956 Davidia involucrata
Dinv34202 Davidia involucrata
Duzib248G0205 Durio zibethinus
ECA236G4940 Erigeron canadensis
EL10Ac6g13149 Beta vulgaris
Eucgr.G02550 Eucalyptus grandis
FAN07G0325 Fragaria x ananassa
FAN12G1121 Fragaria x ananassa
FAN17G0090 Fragaria x ananassa
FAN22G1204 Fragaria x ananassa
FvH4_4g31940 Fragaria vesca
Glyma.01G042500 Glycine max
Glyma.02G021600 Glycine max
Gohir.A13G052700 Gossypium hirsutum
Gohir.D13G068200 Gossypium hirsutum
Gorai.013G077700 Gossypium raimondii
GSVIVG01020072001 Vitis vinifera
HanXRQChr08g0209171 Helianthus annuus
Haze_12061 Corylus avellana
Hma1.2p1_1545F.1_g289920 Hydrangea macrophylla
HPP92_000630 Vanilla planifolia
Hund25269 Selenicereus undatus
Lalb_Chr17g0340391 Lupinus albus
Lj2g0000105 Lotus japonicus
Lj6A794G97 Lonicera japonica
Lj6A794T99 Lonicera japonica
Lsat_1_v5_gn_8_54121 Lactuca sativa
Manes.05G096800 Manihot esculenta
Mapoly0004s0239 Marchantia polymorpha
MCO10G201 Micromonas commoda
MCO13G005 Micromonas commoda
MD16G1078500 Malus domestica
Medtr5g038460 Medicago truncatula
MELO3C026498.2 Cucumis melo
Migut.L01342 Erythranthe guttata
MSTRG.7824 Avicennia marina
Nitab4.5_0009146g0020 Nicotiana tabacum
Nitab4.5_0009649g0010 Nicotiana tabacum
Nn3g17132 Nelumbo nucifera
Os10g0463800 Oryza sativa ssp. japonica
Peaxi162Scf00209g00319 Petunia axillaris
PGR119G2468 Punica granatum
PGSC0003DMG400017643 Solanum tuberosum
Phvul.002G066300 Phaseolus vulgaris
Potri.008G194800 Populus trichocarpa
Pp3c14_9960 Physcomitrium patens
PRCOL_00000833 Prasinoderma coloniale
Prupe.1G268000 Prunus persica
Psat0s3244g0040 Pisum sativum
Psat0s917g0040 Pisum sativum
PSO017G6443 Papaver somniferum
PSO478G0406 Papaver somniferum
QL03p065637 Quercus lobata
RcHm_v2.0_Chr4g0440591 Rosa chinensis
Rhsim12G0057400 Rhododendron simsii
Sabra08G0148000 Salix brachista
SalBow2G1790 Salvia bowleyana
SalBow2G2061 Salvia bowleyana
Sc14g0008380 Simmondsia chinensis
Sed0012992 Sechium edule
SEGI_07096 Sequoiadendron giganteum
SGA_v2.0_scaffold302G47864 Striga asiatica
SMO118G0107 Selaginella moellendorffii
Solyc05g007060.4 Solanum lycopersicum
Sopen05g003030 Solanum pennellii
Sp1g05760 Schrenkiella parvula
Sp1g21770 Schrenkiella parvula
Sp1g21780 Schrenkiella parvula
Sp1g21785 Schrenkiella parvula
TAR374G0431 Trochodendron aralioides
THA.LOC104822097 Tarenaya hassleriana
THA.LOC104822930 Tarenaya hassleriana
Thecc.02G354900 Theobroma cacao
Thhalv10000255m.g Eutrema salsugineum
Thhalv10007811m.g Eutrema salsugineum
Thhalv10007958m.g Eutrema salsugineum
Thhalv10008275m.g Eutrema salsugineum
Thhalv10008276m.g Eutrema salsugineum
Thhalv10023603m.g Eutrema salsugineum
TPR.G13761 Trifolium pratense
TWI18G0549 Tripterygium wilfordii
unitig_749.g13251 Utricularia gibba
vmacro01228 Vaccinium macrocarpon
VMungo1215G2729 Vigna mungo
Zm00001eb046510 Zea mays

User provided reference genes

Program Settings