Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11150 Brassica napus
A08p31720 Brassica napus
Aa31LG1G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3165 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.585 Anthoceros agrestis
Actinidia14939 Actinidia chinensis
Actinidia15237 Actinidia chinensis
Actinidia16703 Actinidia chinensis
Actinidia24608 Actinidia chinensis
Actinidia27648 Actinidia chinensis
Actinidia31987 Actinidia chinensis
Actinidia33606 Actinidia chinensis
Actinidia33607 Actinidia chinensis
Actinidia33626 Actinidia chinensis
Actinidia36693 Actinidia chinensis
AL1G27210 Arabidopsis lyrata
Aqoxy3G00166 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B59VJ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BMT3C6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPKA5V Arachis hypogaea
AT1G15140 Arabidopsis thaliana
ATR0691G234 Amborella trichopoda
Atru.chr11.354 Acer truncatum
AUR62002761 Chenopodium quinoa
AUR62014123 Chenopodium quinoa
BcaB02g06582 Brassica carinata
BcaB03g13074 Brassica carinata
BcaB07g30283 Brassica carinata
BcaC03g17546 Brassica carinata
BcaC05g25445 Brassica carinata
BcaC07g38770 Brassica carinata
BolC2t11573H Brassica oleracea
BolC5t30064H Brassica oleracea
BolC5t33841H Brassica oleracea
BolC8t49328H Brassica oleracea
BolC8t52061H Brassica oleracea
BraA06t24295Z Brassica rapa
BraA08t35094Z Brassica rapa
C02p55250 Brassica napus
C05p13270 Brassica napus
C08p17030 Brassica napus
C08p45130 Brassica napus
CAN.G1489.9 Capsicum annuum
CANSAT01G2004 Cannabis sativa
CARHR015680 Cardamine hirsuta
Carub.0001s1491 Capsella rubella
Ca_23697_v3 Cicer arietinum L.
CBR_g23714 Chara braunii
CBR_g8311 Chara braunii
Cc11_g09170 Coffea canephora
CDE04G0818 Ceratophyllum demersum
CDE06G1149 Ceratophyllum demersum
Cfa015796 Carpinus fangiana
Ciclev10016124m.g Citrus clementina
CiPaw.05G246100 Carya illinoinensis
CiPaw.06G014700 Carya illinoinensis
ClCG05G022300 Citrullus lanatus
COL.COLO4_15325 Corchorus olitorius
Cpa.g.sc65.98 Carica papaya
Cre01.g000350 Chlamydomonas reinhardtii
Cre01.g005950 Chlamydomonas reinhardtii
CsaV3_5G034820 Cucumis sativus L.
CSS0000916 Camellia sinensis var. sinensis
CSS0048780 Camellia sinensis var. sinensis
DCAR_023619 Daucus carota
DCAR_030188 Daucus carota
Dinv16170 Davidia involucrata
Duzib251G0621 Durio zibethinus
ECA233G2791 Erigeron canadensis
EL10Ac6g14267 Beta vulgaris
Eucgr.B02879 Eucalyptus grandis
FAN07G0674 Fragaria x ananassa
FAN12G1757 Fragaria x ananassa
FAN12G4108 Fragaria x ananassa
FAN17G1658 Fragaria x ananassa
FAN22G1507 Fragaria x ananassa
FvH4_4g26280 Fragaria vesca
Glyma.10G267000 Glycine max
Glyma.20G123700 Glycine max
Gohir.A05G317200 Gossypium hirsutum
Gohir.D05G319000 Gossypium hirsutum
Gorai.009G341900 Gossypium raimondii
GSVIVG01011796001 Vitis vinifera
HanXRQChr15g0466211 Helianthus annuus
Haze_00697 Corylus avellana
Hma1.2p1_0114F.1_g055430 Hydrangea macrophylla
HPP92_021849 Vanilla planifolia
Hund25007 Selenicereus undatus
Lalb_Chr06g0165701 Lupinus albus
Lalb_Chr17g0338761 Lupinus albus
Lj3A876G45 Lonicera japonica
Lj5g0023519 Lotus japonicus
Lj6A750T89 Lonicera japonica
Lsat_1_v5_gn_8_41661 Lactuca sativa
Manes.14G110200 Manihot esculenta
Mapoly0004s0030 Marchantia polymorpha
Mapoly0118s0023 Marchantia polymorpha
MBI10_g46302_MAGBIO Magnolia biondii
MBI16_g21171_MAGBIO Magnolia biondii
MCO13G089 Micromonas commoda
MD13G1031300 Malus domestica
MD16G1033500 Malus domestica
Medtr1g108710 Medicago truncatula
MELO3C012293.2 Cucumis melo
Migut.E00397 Erythranthe guttata
Migut.L00651 Erythranthe guttata
Migut.L00828 Erythranthe guttata
MSTRG.13568 Avicennia marina
MSTRG.2195 Avicennia marina
Nitab4.5_0000293g0040 Nicotiana tabacum
Nitab4.5_0000350g0220 Nicotiana tabacum
Nn4g24046 Nelumbo nucifera
Oeu004319.1 Olea europaea
Os01g0120600 Oryza sativa ssp. japonica
Os02g0328300 Oryza sativa ssp. japonica
Peaxi162Scf00205g00925 Petunia axillaris
PGR102G1684 Punica granatum
PGR119G1032 Punica granatum
PGSC0003DMG400030559 Solanum tuberosum
Phvul.007G035000 Phaseolus vulgaris
Potri.008G126700 Populus trichocarpa
Potri.010G116500 Populus trichocarpa
Pp3c16_22650 Physcomitrium patens
Pp3c20_8810 Physcomitrium patens
Pp3c25_12270 Physcomitrium patens
PRCOL_00001993 Prasinoderma coloniale
PRCOL_00003073 Prasinoderma coloniale
Prupe.1G320800 Prunus persica
Psat6g222520 Pisum sativum
PSO017G7108 Papaver somniferum
PSO478G0614 Papaver somniferum
QL01p002798 Quercus lobata
RcHm_v2.0_Chr2g0123901 Rosa chinensis
RcHm_v2.0_Chr4g0433881 Rosa chinensis
RcHm_v2.0_Chr6g0253871 Rosa chinensis
RcHm_v2.0_Chr6g0284911 Rosa chinensis
RcHm_v2.0_Chr7g0204021 Rosa chinensis
Rhsim09G0069000 Rhododendron simsii
Sabra10G0086200 Salix brachista
Sabra10G0087900 Salix brachista
SalBow8G1964 Salvia bowleyana
Sc14g0007220 Simmondsia chinensis
Sed0017516 Sechium edule
Sed0020304 Sechium edule
SEGI_29541 Sequoiadendron giganteum
SEGI_37569 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06920 Striga asiatica
SGA_v2.0_scaffold50G18535 Striga asiatica
SHI16315 Sapria himalayana
SMO174G0012 Selaginella moellendorffii
SMO356G0347 Selaginella moellendorffii
Solyc05g008450.3 Solanum lycopersicum
Sopen05g004280 Solanum pennellii
Sp1g13480 Schrenkiella parvula
TAR629G2922 Trochodendron aralioides
THA.LOC104805048 Tarenaya hassleriana
Thecc.02G217400 Theobroma cacao
Thhalv10008333m.g Eutrema salsugineum
TPR.G10991 Trifolium pratense
TPR.G4918 Trifolium pratense
TWI31G0297 Tripterygium wilfordii
TWI79G1401 Tripterygium wilfordii
unitig_699.g19481 Utricularia gibba
vmacro01428 Vaccinium macrocarpon
vmacro01429 Vaccinium macrocarpon
VMungo0720G1296 Vigna mungo
Zm00001eb121490 Zea mays
Zm00001eb241500 Zea mays

User provided reference genes

Program Settings