Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21880 Brassica napus
A09p46880 Brassica napus
Aa31LG10G8930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2315 Anthoceros agrestis
Actinidia07054 Actinidia chinensis
Actinidia29168 Actinidia chinensis
AL3G43180 Arabidopsis lyrata
AL3G43230 Arabidopsis lyrata
AL5G34970 Arabidopsis lyrata
AL5G35160 Arabidopsis lyrata
Aqoxy4G03223 Aquilegia oxysepala
Aqoxy7G01126 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59HWIF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.77ZQ01 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MGHR3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MS11WY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PUF7HK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SP0BHI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U24FMU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XII4UX Arachis hypogaea
AT1G48530 Arabidopsis thaliana
AT3G53970 Arabidopsis thaliana
ATR1134G026 Amborella trichopoda
Atru.chr8.2089 Acer truncatum
AUR62015980 Chenopodium quinoa
AUR62021188 Chenopodium quinoa
BcaB01g00227 Brassica carinata
BcaB02g07758 Brassica carinata
BcaB02g08498 Brassica carinata
BcaC01g05774 Brassica carinata
BcaC02g09118 Brassica carinata
BcaC05g26039 Brassica carinata
BcaC07g39746 Brassica carinata
BcaC08g44655 Brassica carinata
BolC5t30714H Brassica oleracea
BolC6t37364H Brassica oleracea
BolC6t39520H Brassica oleracea
BolC8t50520H Brassica oleracea
BraA07t29869Z Brassica rapa
BraA09t40156Z Brassica rapa
C04p55540 Brassica napus
C05p20210 Brassica napus
C06p21750 Brassica napus
C08p29190 Brassica napus
CAN.G697.2 Capsicum annuum
CAN.G697.3 Capsicum annuum
CANSAT35G0035 Cannabis sativa
CARHR163870 Cardamine hirsuta
CARHR164030 Cardamine hirsuta
Carub.0003s2694 Capsella rubella
Carub.0005s2056 Capsella rubella
Ca_07566_v3 Cicer arietinum L.
CBR_g46706 Chara braunii
Cc06_g02090 Coffea canephora
CDE02G2360 Ceratophyllum demersum
Cfa009861 Carpinus fangiana
Cfa010180 Carpinus fangiana
Ciclev10012365m.g Citrus clementina
Ciclev10021036m.g Citrus clementina
CiPaw.09G201200 Carya illinoinensis
ClCG04G007620 Citrullus lanatus
COL.COLO4_14697 Corchorus olitorius
Cre07.g331000 Chlamydomonas reinhardtii
CsaV3_4G025590 Cucumis sativus L.
CSS0007767 Camellia sinensis var. sinensis
DCAR_024051 Daucus carota
DCAR_028811 Daucus carota
Dinv35542 Davidia involucrata
Duzib093G0395 Durio zibethinus
Duzib106G0220 Durio zibethinus
ECA236G3305 Erigeron canadensis
EL10Ac3g05638 Beta vulgaris
Eucgr.K03043 Eucalyptus grandis
FAN02G2124 Fragaria x ananassa
FAN05G0076 Fragaria x ananassa
FAN07G0792 Fragaria x ananassa
FAN07G2658 Fragaria x ananassa
FAN09G1025 Fragaria x ananassa
FAN12G2442 Fragaria x ananassa
FAN12G3486 Fragaria x ananassa
FAN14G3630 Fragaria x ananassa
FvH4_4g10740 Fragaria vesca
FvH4_6g12740 Fragaria vesca
Glyma.09G059100 Glycine max
Glyma.15G165200 Glycine max
Gohir.A01G221000 Gossypium hirsutum
Gohir.D01G209900 Gossypium hirsutum
Gorai.002G255500 Gossypium raimondii
GSVIVG01034068001 Vitis vinifera
HanXRQChr04g0124481 Helianthus annuus
Haze_20882 Corylus avellana
Haze_20891 Corylus avellana
Hma1.2p1_0097F.1_g048000 Hydrangea macrophylla
Hma1.2p1_0671F.1_g200560 Hydrangea macrophylla
HPP92_005893 Vanilla planifolia
Hund00715 Selenicereus undatus
Lalb_Chr03g0042691 Lupinus albus
Lalb_Chr18g0052541 Lupinus albus
Lalb_Chr19g0125041 Lupinus albus
Lj1g0008590 Lotus japonicus
Lj2C86T9 Lonicera japonica
Lj3C960G5 Lonicera japonica
Lj4g0027540 Lotus japonicus
Lsat_1_v5_gn_8_84101 Lactuca sativa
Manes.09G098300 Manihot esculenta
Mapoly0013s0005 Marchantia polymorpha
MCO11G019 Micromonas commoda
MD04G1138800 Malus domestica
MD12G1154600 Malus domestica
MD12G1200000 Malus domestica
MD17G1162600 Malus domestica
Medtr7g065120 Medicago truncatula
MELO3C003185.2 Cucumis melo
Migut.J00264 Erythranthe guttata
MSTRG.10244 Avicennia marina
Nitab4.5_0008116g0030 Nicotiana tabacum
Nn2g11289 Nelumbo nucifera
Nn2g13527 Nelumbo nucifera
Oeu001834.1 Olea europaea
Oeu021128.1 Olea europaea
Os07g0548900 Oryza sativa ssp. japonica
Peaxi162Scf00975g00132 Petunia axillaris
PGR004G1844 Punica granatum
PGSC0003DMG400024265 Solanum tuberosum
Phvul.006G149300 Phaseolus vulgaris
Potri.016G103800 Populus trichocarpa
Pp3c12_26190 Physcomitrium patens
Prupe.6G264400 Prunus persica
Prupe.6G304800 Prunus persica
Psat3g133560 Pisum sativum
PSO104G0005 Papaver somniferum
PSO104G0021 Papaver somniferum
PSO104G0091 Papaver somniferum
PSO339G0401 Papaver somniferum
PSO384G5122 Papaver somniferum
PSO421G0231 Papaver somniferum
QL07p028338 Quercus lobata
RcHm_v2.0_Chr3g0464661 Rosa chinensis
RcHm_v2.0_Chr4g0406841 Rosa chinensis
RcHm_v2.0_Chr4g0416021 Rosa chinensis
RcHm_v2.0_Chr4g0419261 Rosa chinensis
RcHm_v2.0_Chr5g0047111 Rosa chinensis
Rhsim05G0199700 Rhododendron simsii
Sabra16G0103700 Salix brachista
SalBow7G2619 Salvia bowleyana
Sc22g0004390 Simmondsia chinensis
Sed0021611 Sechium edule
SEGI_10222 Sequoiadendron giganteum
SEGI_17127 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11703 Striga asiatica
SGA_v2.0_scaffold673G53429 Striga asiatica
SGA_v2.0_scaffold96G28918 Striga asiatica
SMO115G0073 Selaginella moellendorffii
Solyc09g011450.4 Solanum lycopersicum
Sopen09g006170 Solanum pennellii
Sp5g08430 Schrenkiella parvula
TAR633G1640 Trochodendron aralioides
TAR633G2132 Trochodendron aralioides
THA.LOC104806541 Tarenaya hassleriana
Thecc.05G029300 Theobroma cacao
Thhalv10010577m.g Eutrema salsugineum
TPR.G34923 Trifolium pratense
TWI53G1663 Tripterygium wilfordii
TWI74G0733 Tripterygium wilfordii
unitig_62.g23469 Utricularia gibba
vmacro20195 Vaccinium macrocarpon
VMungo0540G1009 Vigna mungo
Zm00001eb323600 Zea mays

User provided reference genes

Program Settings