Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p36820 Brassica napus
Aa31LG8G30 Aethionema arabicum
Actinidia00850 Actinidia chinensis
Actinidia03628 Actinidia chinensis
Actinidia03629 Actinidia chinensis
Ah.04g162360 Amaranthus hybridus
Ah.06g192560 Amaranthus hybridus
Ah.16g106500 Amaranthus hybridus
AL3G24350 Arabidopsis lyrata
Aqoxy1G01339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NLM3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZP601Q Arachis hypogaea
AT3G12680 Arabidopsis thaliana
ATR0073G009 Amborella trichopoda
Atru.chr1.3 Acer truncatum
Atru.chr3.1725 Acer truncatum
Atru.chr4.2280 Acer truncatum
AUR62000986 Chenopodium quinoa
AUR62026900 Chenopodium quinoa
AUR62040881 Chenopodium quinoa
AUR62040882 Chenopodium quinoa
AUR62040883 Chenopodium quinoa
BcaB04g18715 Brassica carinata
BcaB06g25524 Brassica carinata
BcaC05g29248 Brassica carinata
BolC1t05188H Brassica oleracea
BolC5t34192H Brassica oleracea
BraA05t22483Z Brassica rapa
C01p52500 Brassica napus
C05p55270 Brassica napus
C09p09250 Brassica napus
CAN.G87.5 Capsicum annuum
CAN.G87.6 Capsicum annuum
CANSAT56G2786 Cannabis sativa
CARHR087190 Cardamine hirsuta
Carub.0003s1203 Capsella rubella
Ca_26791_v3 Cicer arietinum L.
CBR_g24052 Chara braunii
Cc00_g09050 Coffea canephora
CDE04G2037 Ceratophyllum demersum
CDE10G0204 Ceratophyllum demersum
CDE10G0346 Ceratophyllum demersum
CDE10G1027 Ceratophyllum demersum
Cfa017780 Carpinus fangiana
Ciclev10004790m.g Citrus clementina
Ciclev10016232m.g Citrus clementina
CiPaw.15G110200 Carya illinoinensis
ClCG09G022910 Citrullus lanatus
COL.COLO4_32272 Corchorus olitorius
Cpa.g.sc118.23 Carica papaya
Cpa.g.sc118.25 Carica papaya
CsaV3_7G023160 Cucumis sativus L.
CSS0016871 Camellia sinensis var. sinensis
CSS0030980 Camellia sinensis var. sinensis
DCAR_019902 Daucus carota
Dinv19567 Davidia involucrata
Dinv42448 Davidia involucrata
Duzib187G0086 Durio zibethinus
EL10Ac2g03339 Beta vulgaris
Eucgr.F04489 Eucalyptus grandis
FAN11G0244 Fragaria x ananassa
FAN16G2270 Fragaria x ananassa
FAN21G1437 Fragaria x ananassa
FvH4_3g13621 Fragaria vesca
FvH4_3g13640 Fragaria vesca
Glyma.08G232700 Glycine max
Glyma.15G217400 Glycine max
Gohir.A13G127000 Gossypium hirsutum
Gohir.D13G130600 Gossypium hirsutum
Gorai.013G146700 Gossypium raimondii
GSVIVG01036686001 Vitis vinifera
HanXRQChr07g0190701 Helianthus annuus
HanXRQChr11g0335901 Helianthus annuus
HanXRQChr17g0549491 Helianthus annuus
Haze_18447 Corylus avellana
Haze_18449 Corylus avellana
Hma1.2p1_0151F.1_g066875 Hydrangea macrophylla
Hma1.2p1_0151F.1_g066900 Hydrangea macrophylla
Hma1.2p1_0151F.1_g066910 Hydrangea macrophylla
Hma1.2p1_1245F.1_g270090 Hydrangea macrophylla
HPP92_024149 Vanilla planifolia
HPP92_024197 Vanilla planifolia
Lalb_Chr03g0031981 Lupinus albus
Lj3g0001249 Lotus japonicus
Lj8A191G24 Lonicera japonica
Lj8C191T2 Lonicera japonica
Lsat_1_v5_gn_0_17341 Lactuca sativa
Lsat_1_v5_gn_5_35081 Lactuca sativa
Lsat_1_v5_gn_7_111061 Lactuca sativa
Lsat_1_v5_gn_7_61541 Lactuca sativa
Manes.03G076000 Manihot esculenta
Manes.16G055032 Manihot esculenta
Mapoly0111s0035 Marchantia polymorpha
MBI07_g10940_MAGBIO Magnolia biondii
MBI10_g30432_MAGBIO Magnolia biondii
MD06G1158700 Malus domestica
MD06G1158900 Malus domestica
MD06G1159100 Malus domestica
MD10G1219700 Malus domestica
Medtr8g446930 Medicago truncatula
MELO3C012579.2 Cucumis melo
Migut.M01488 Erythranthe guttata
MSTRG.14576 Avicennia marina
Nitab4.5_0000007g0420 Nicotiana tabacum
Nitab4.5_0001995g0020 Nicotiana tabacum
Nn1g09842 Nelumbo nucifera
Nn7g38088 Nelumbo nucifera
Nn7g38427 Nelumbo nucifera
Os01g0616400 Oryza sativa ssp. japonica
Os06g0519400 Oryza sativa ssp. japonica
Peaxi162Scf00006g00236 Petunia axillaris
PGR031G0396 Punica granatum
Phvul.011G180700 Phaseolus vulgaris
Potri.008G080300 Populus trichocarpa
Potri.010G176300 Populus trichocarpa
Pp3c1_12940 Physcomitrium patens
Pp3c2_24140 Physcomitrium patens
Prupe.4G124000 Prunus persica
Prupe.5G158400 Prunus persica
Prupe.5G158700 Prunus persica
Prupe.5G158800 Prunus persica
Prupe.7G013500 Prunus persica
Prupe.8G067100 Prunus persica
Psat4g186640 Pisum sativum
PSO541G3994 Papaver somniferum
QL04p096598 Quercus lobata
RcHm_v2.0_Chr5g0022551 Rosa chinensis
RcHm_v2.0_Chr5g0022581 Rosa chinensis
RcHm_v2.0_Chr5g0022611 Rosa chinensis
RcHm_v2.0_Chr5g0022711 Rosa chinensis
RcHm_v2.0_Chr5g0022731 Rosa chinensis
RcHm_v2.0_Chr5g0022751 Rosa chinensis
RcHm_v2.0_Chr5g0022761 Rosa chinensis
RcHm_v2.0_Chr5g0022771 Rosa chinensis
RcHm_v2.0_Chr5g0022841 Rosa chinensis
RcHm_v2.0_Chr5g0022861 Rosa chinensis
RcHm_v2.0_Chr5g0022911 Rosa chinensis
Rhsim04G0003800 Rhododendron simsii
Rhsim08G0183200 Rhododendron simsii
Sabra08G0059800 Salix brachista
Sabra16G0219300 Salix brachista
Sed0019040 Sechium edule
SEGI_15894 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40165 Striga asiatica
SGA_v2.0_scaffold7G03646 Striga asiatica
Solyc12g017410.2 Solanum lycopersicum
Sopen12g008190 Solanum pennellii
Sp3g10830 Schrenkiella parvula
TAR624G1163 Trochodendron aralioides
TAR626G0199 Trochodendron aralioides
TAR626G0775 Trochodendron aralioides
THA.LOC104816139 Tarenaya hassleriana
THA.LOC104826401 Tarenaya hassleriana
THA.LOC109116000 Tarenaya hassleriana
Thecc.07G193200 Theobroma cacao
Thhalv10020494m.g Eutrema salsugineum
TPR.G30139 Trifolium pratense
TWI38G0603 Tripterygium wilfordii
TWI38G1531 Tripterygium wilfordii
unitig_42.g32296 Utricularia gibba
unitig_52.g17330 Utricularia gibba
unitig_62.g23236 Utricularia gibba
vmacro07563 Vaccinium macrocarpon
vmacro09759 Vaccinium macrocarpon
VMungo1127G0643 Vigna mungo
Zm00001eb053460 Zea mays
Zm00001eb162130 Zea mays
Zm00001eb358260 Zea mays

User provided reference genes

Program Settings