Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12630 Brassica napus
A09p25550 Brassica napus
Aa31LG6G3270 Aethionema arabicum
Aa31LG9G9260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5662 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5113 Anthoceros agrestis
Actinidia04777 Actinidia chinensis
Actinidia11832 Actinidia chinensis
Actinidia36906 Actinidia chinensis
Ah.09g237150 Amaranthus hybridus
Ah.14g088480 Amaranthus hybridus
AL6G48780 Arabidopsis lyrata
AL7G32830 Arabidopsis lyrata
Aqoxy4G02128 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1B2UBR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1SUYP Arachis hypogaea
AT4G05180 Arabidopsis thaliana
AT4G21280 Arabidopsis thaliana
ATR1088G031 Amborella trichopoda
AUR62012582 Chenopodium quinoa
AUR62014619 Chenopodium quinoa
AUR62044485 Chenopodium quinoa
BcaB01g01890 Brassica carinata
BcaC04g21382 Brassica carinata
BcaC09g51238 Brassica carinata
BcaNung03829 Brassica carinata
BolC1t01473H Brassica oleracea
BolC9t56091H Brassica oleracea
BraA01t01206Z Brassica rapa
BraA09t38130Z Brassica rapa
C01p15190 Brassica napus
C01p15220 Brassica napus
C09p32460 Brassica napus
CAN.G1045.30 Capsicum annuum
CAN.G424.102 Capsicum annuum
CANSAT56G4323 Cannabis sativa
CARHR227860 Cardamine hirsuta
CARHR252370 Cardamine hirsuta
Carub.0006s3313 Capsella rubella
Carub.0007s2015 Capsella rubella
Ca_14052_v3 Cicer arietinum L.
CBR_g33939 Chara braunii
Cc02_g11770 Coffea canephora
CDE02G0449 Ceratophyllum demersum
CDE05G2391 Ceratophyllum demersum
CDE11G0355 Ceratophyllum demersum
Cfa016409 Carpinus fangiana
Ciclev10016525m.g Citrus clementina
CiPaw.09G080300 Carya illinoinensis
ClCG03G005130 Citrullus lanatus
COL.COLO4_31686 Corchorus olitorius
Cpa.g.sc139.72 Carica papaya
Cre08.g372450 Chlamydomonas reinhardtii
CsaV3_1G011330 Cucumis sativus L.
CSS0007400 Camellia sinensis var. sinensis
CSS0021470 Camellia sinensis var. sinensis
DCAR_024925 Daucus carota
DCAR_028152 Daucus carota
Dinv17849 Davidia involucrata
Dinv18941 Davidia involucrata
Duzib192G0389 Durio zibethinus
Duzib235G0889 Durio zibethinus
ECA248G1673 Erigeron canadensis
EL10As6g23703 Beta vulgaris
Eucgr.D00854 Eucalyptus grandis
FAN21G1744 Fragaria x ananassa
FAN25G2308 Fragaria x ananassa
FvH4_3g02920 Fragaria vesca
Glyma.03G114600 Glycine max
Glyma.07G112000 Glycine max
Gohir.A05G167366 Gossypium hirsutum
Gohir.A05G167500 Gossypium hirsutum
Gohir.A06G121600 Gossypium hirsutum
Gohir.A10G016700 Gossypium hirsutum
Gohir.D05G170500 Gossypium hirsutum
Gohir.D06G125800 Gossypium hirsutum
Gohir.D10G016800 Gossypium hirsutum
Gorai.009G175700 Gossypium raimondii
Gorai.010G146500 Gossypium raimondii
Gorai.011G018700 Gossypium raimondii
GSVIVG01002809001 Vitis vinifera
HanXRQChr01g0004411 Helianthus annuus
HanXRQChr11g0339031 Helianthus annuus
Haze_06687 Corylus avellana
Hma1.2p1_1682F.1_g297320 Hydrangea macrophylla
HPP92_000863 Vanilla planifolia
HPP92_000866 Vanilla planifolia
Hund21317 Selenicereus undatus
Hund23509 Selenicereus undatus
Lalb_Chr07g0195561 Lupinus albus
Lalb_Chr13g0290461 Lupinus albus
Lj2A275T36 Lonicera japonica
Lj2A275T37 Lonicera japonica
Lj3g0019605 Lotus japonicus
Lsat_1_v5_gn_1_123241 Lactuca sativa
Lsat_1_v5_gn_7_18280 Lactuca sativa
Manes.16G017000 Manihot esculenta
Mapoly0115s0030 Marchantia polymorpha
MBI02_g29713_MAGBIO Magnolia biondii
MCO08G318 Micromonas commoda
MD05G1336200 Malus domestica
MD10G1311700 Malus domestica
Medtr8g005175 Medicago truncatula
MELO3C002510.2 Cucumis melo
Migut.M01264 Erythranthe guttata
MSTRG.13163 Avicennia marina
Nitab4.5_0002345g0070 Nicotiana tabacum
Nitab4.5_0003738g0060 Nicotiana tabacum
Nitab4.5_0006475g0030 Nicotiana tabacum
Nn1g03715 Nelumbo nucifera
Nn1g06952 Nelumbo nucifera
Oeu030990.2 Olea europaea
Os05g0313100 Oryza sativa ssp. japonica
Os07g0544800 Oryza sativa ssp. japonica
Peaxi162Scf00082g01216 Petunia axillaris
Peaxi162Scf00678g00046 Petunia axillaris
PGR004G2512 Punica granatum
PGSC0003DMG400021727 Solanum tuberosum
Phvul.010G052300 Phaseolus vulgaris
Potri.004G031500 Populus trichocarpa
Potri.011G031300 Populus trichocarpa
Pp3c13_6570 Physcomitrium patens
Pp3c3_2620 Physcomitrium patens
Pp3c5_4110 Physcomitrium patens
Pp3c6_20260 Physcomitrium patens
Pp3c6_20270 Physcomitrium patens
Prupe.4G029300 Prunus persica
Psat4g225520 Pisum sativum
PSO210G3083 Papaver somniferum
PSO210G5932 Papaver somniferum
PSO210G7066 Papaver somniferum
PSO832G1281 Papaver somniferum
QL05p077152 Quercus lobata
QL93p0073_1246 Quercus lobata
RcHm_v2.0_Chr5g0004501 Rosa chinensis
Rhsim02G0115100 Rhododendron simsii
Rhsim02G0115200 Rhododendron simsii
Sabra04G0017800 Salix brachista
Sabra11G0018800 Salix brachista
Sabra11G0024700 Salix brachista
SalBow8G1884 Salvia bowleyana
Sc24g0000090 Simmondsia chinensis
Sc24g0000590 Simmondsia chinensis
Sed0006596 Sechium edule
SEGI_28796 Sequoiadendron giganteum
SGA_v2.0_scaffold114G32015 Striga asiatica
SGA_v2.0_scaffold49G18269 Striga asiatica
SGA_v2.0_scaffold7G03893 Striga asiatica
SMO171G0022 Selaginella moellendorffii
Solyc02g079950.3 Solanum lycopersicum
Sopen02g024700 Solanum pennellii
Sp6g03810 Schrenkiella parvula
Sp7g19360 Schrenkiella parvula
TAR624G0645 Trochodendron aralioides
THA.LOC104812569 Tarenaya hassleriana
THA.LOC104813357 Tarenaya hassleriana
Thecc.06G208500 Theobroma cacao
Thhalv10026172m.g Eutrema salsugineum
Thhalv10028939m.g Eutrema salsugineum
TPR.G33125 Trifolium pratense
TWI38G0662 Tripterygium wilfordii
TWI63G1530 Tripterygium wilfordii
unitig_21.g20230 Utricularia gibba
unitig_744.g24528 Utricularia gibba
vmacro15841 Vaccinium macrocarpon
VMungo0331G0173 Vigna mungo
Zm00001eb106430 Zea mays
Zm00001eb323460 Zea mays

User provided reference genes

Program Settings