Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00220 Brassica napus
A09p12940 Brassica napus
Aa31LG8G17460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis
Actinidia07297 Actinidia chinensis
Actinidia09547 Actinidia chinensis
Actinidia25791 Actinidia chinensis
Actinidia37513 Actinidia chinensis
Ah.02g120380 Amaranthus hybridus
Ah.03g147410 Amaranthus hybridus
AL3G53520 Arabidopsis lyrata
AL4G32160 Arabidopsis lyrata
Aqoxy2G03649 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea
AT2G20510 Arabidopsis thaliana
AT2G36070 Arabidopsis thaliana
ATR0736G190 Amborella trichopoda
Atru.chr3.4028 Acer truncatum
Atru.chr5.1689 Acer truncatum
AUR62030125 Chenopodium quinoa
AUR62038602 Chenopodium quinoa
BcaB03g16846 Brassica carinata
BcaB07g31584 Brassica carinata
BcaB08g34912 Brassica carinata
BcaC04g22784 Brassica carinata
BcaC06g36740 Brassica carinata
BcaC07g41210 Brassica carinata
BolC7t40497H Brassica oleracea
BolC9t54440H Brassica oleracea
BraA07t27815Z Brassica rapa
BraA09t36939Z Brassica rapa
C07p00510 Brassica napus
C09p15320 Brassica napus
CAN.G134.214 Capsicum annuum
CAN.G279.25 Capsicum annuum
CANSAT01G2107 Cannabis sativa
CARHR130310 Cardamine hirsuta
Carub.0003s3496 Capsella rubella
Carub.0004s1781 Capsella rubella
Ca_26001_v3 Cicer arietinum L.
CBR_g30902 Chara braunii
Cc01_g18340 Coffea canephora
CDE03G0182 Ceratophyllum demersum
CDE04G1040 Ceratophyllum demersum
CDE04G1955 Ceratophyllum demersum
Cfa012194 Carpinus fangiana
Cfa026408 Carpinus fangiana
Ciclev10019992m.g Citrus clementina
CiPaw.11G131900 Carya illinoinensis
ClCG01G005870 Citrullus lanatus
COL.COLO4_05893 Corchorus olitorius
Cpa.g.sc81.94 Carica papaya
Cre16.g660800 Chlamydomonas reinhardtii
CsaV3_5G028820 Cucumis sativus L.
CSS0015888 Camellia sinensis var. sinensis
CSS0038412 Camellia sinensis var. sinensis
CSS0041954 Camellia sinensis var. sinensis
DCAR_005689 Daucus carota
Dinv22405 Davidia involucrata
Dinv34629 Davidia involucrata
Duzib133G1203 Durio zibethinus
Duzib138G0474 Durio zibethinus
ECA236G3853 Erigeron canadensis
EL10Ac7g17258 Beta vulgaris
Eucgr.B01552 Eucalyptus grandis
Eucgr.G01944 Eucalyptus grandis
FAN07G0785 Fragaria x ananassa
FAN12G0345 Fragaria x ananassa
FAN12G3775 Fragaria x ananassa
FAN15G2877 Fragaria x ananassa
FAN17G2653 Fragaria x ananassa
FAN20G2986 Fragaria x ananassa
FAN24G2300 Fragaria x ananassa
FAN27G3501 Fragaria x ananassa
FvH4_2g21470 Fragaria vesca
FvH4_3g18772 Fragaria vesca
FvH4_4g12040 Fragaria vesca
FvH4_4g16331 Fragaria vesca
Glyma.04G107400 Glycine max
Glyma.09G002800 Glycine max
Gohir.A08G190100 Gossypium hirsutum
Gohir.D08G208600 Gossypium hirsutum
Gorai.004G221000 Gossypium raimondii
GSVIVG01028335001 Vitis vinifera
HanXRQChr10g0294161 Helianthus annuus
HanXRQChr10g0299451 Helianthus annuus
HanXRQChr16g0512021 Helianthus annuus
Haze_08822 Corylus avellana
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla
HPP92_012187 Vanilla planifolia
Lalb_Chr06g0171061 Lupinus albus
Lalb_Chr06g0171071 Lupinus albus
Lalb_Chr15g0090311 Lupinus albus
Lj2A1151T32 Lonicera japonica
Lj6g0013651 Lotus japonicus
Lsat_1_v5_gn_7_79121 Lactuca sativa
Manes.12G032400 Manihot esculenta
Manes.13G034400 Manihot esculenta
Mapoly0070s0010 Marchantia polymorpha
MBI10_g22594_MAGBIO Magnolia biondii
MCO02G332 Micromonas commoda
MD05G1197100 Malus domestica
MD09G1008600 Malus domestica
Medtr2g083690 Medicago truncatula
Medtr4g029490 Medicago truncatula
Medtr4g075680 Medicago truncatula
MELO3C033986.2 Cucumis melo
Migut.N01348 Erythranthe guttata
Migut.O00608 Erythranthe guttata
MSTRG.16949 Avicennia marina
Nitab4.5_0000245g0150 Nicotiana tabacum
Nitab4.5_0001165g0160 Nicotiana tabacum
Nitab4.5_0001526g0060 Nicotiana tabacum
Nitab4.5_0007798g0030 Nicotiana tabacum
Nn3g19657 Nelumbo nucifera
Oeu021968.1 Olea europaea
Oeu042777.2 Olea europaea
Oeu062471.2 Olea europaea
Os07g0409700 Oryza sativa ssp. japonica
Peaxi162Scf00118g00111 Petunia axillaris
Peaxi162Scf00225g00519 Petunia axillaris
Peaxi162Scf00225g00527 Petunia axillaris
PGR031G1029 Punica granatum
PGSC0003DMG400022489 Solanum tuberosum
Phvul.005G002100 Phaseolus vulgaris
Potri.002G038300 Populus trichocarpa
Potri.005G224500 Populus trichocarpa
Pp3c12_7570 Physcomitrium patens
Pp3c4_19960 Physcomitrium patens
PRCOL_00004598 Prasinoderma coloniale
Prupe.8G223600 Prunus persica
Psat7g228960 Pisum sativum
PSO339G3828 Papaver somniferum
QL12p032241 Quercus lobata
RcHm_v2.0_Chr4g0409381 Rosa chinensis
RcHm_v2.0_Chr5g0013581 Rosa chinensis
RcHm_v2.0_Chr6g0288111 Rosa chinensis
Rhsim01G0263500 Rhododendron simsii
Rhsim01G0263600 Rhododendron simsii
Sabra02G0030700 Salix brachista
Sabra05G0173200 Salix brachista
SalBow1G3185 Salvia bowleyana
Sc05g0000700 Simmondsia chinensis
Sed0002598 Sechium edule
Sed0003224 Sechium edule
SEGI_05587 Sequoiadendron giganteum
SEGI_36648 Sequoiadendron giganteum
SEGI_40921 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13335 Striga asiatica
SGA_v2.0_scaffold58G20323 Striga asiatica
SHI09778 Sapria himalayana
SMO353G0191 Selaginella moellendorffii
Solyc01g098230.3 Solanum lycopersicum
Sopen01g041810 Solanum pennellii
Sp3g33730 Schrenkiella parvula
TAR362G0204 Trochodendron aralioides
TAR636G1466 Trochodendron aralioides
THA.LOC104805532 Tarenaya hassleriana
Thecc.01G258100 Theobroma cacao
Thhalv10001977m.g Eutrema salsugineum
TPR.G13518 Trifolium pratense
TPR.G5025 Trifolium pratense
TWI32G0756 Tripterygium wilfordii
TWI34G1830 Tripterygium wilfordii
unitig_746.g26574 Utricularia gibba
VMungo1080G0701 Vigna mungo
Zm00001eb111900 Zea mays

User provided reference genes

Program Settings