Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia05297 Actinidia chinensis
Actinidia07050 Actinidia chinensis
Actinidia11245 Actinidia chinensis
Actinidia13126 Actinidia chinensis
Actinidia26442 Actinidia chinensis
Actinidia33402 Actinidia chinensis
Aqoxy2G02033 Aquilegia oxysepala
Aqoxy4G02996 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea
ATR0559G289 Amborella trichopoda
Atru.chr8.1956 Acer truncatum
AUR62037393 Chenopodium quinoa
AUR62041741 Chenopodium quinoa
CAN.G97.20 Capsicum annuum
CANSAT35G0311 Cannabis sativa
Ca_08787_v3 Cicer arietinum L.
Ca_09615_v3 Cicer arietinum L.
Cc06_g02970 Coffea canephora
CDE02G3836 Ceratophyllum demersum
CDE09G0187 Ceratophyllum demersum
Cfa017429 Carpinus fangiana
Ciclev10012502m.g Citrus clementina
CiPaw.09G188800 Carya illinoinensis
CiPaw.10G143300 Carya illinoinensis
ClCG10G020930 Citrullus lanatus
COL.COLO4_14855 Corchorus olitorius
Cpa.g.sc11.170 Carica papaya
Cpa.g.sc11.57 Carica papaya
Cpa.g.sc195.22 Carica papaya
CsaV3_3G035080 Cucumis sativus L.
CSS0004803 Camellia sinensis var. sinensis
CSS0042901 Camellia sinensis var. sinensis
CSS0043919 Camellia sinensis var. sinensis
DCAR_007387 Daucus carota
DCAR_009254 Daucus carota
Dinv35636 Davidia involucrata
Dinv37205 Davidia involucrata
Duzib093G1984 Durio zibethinus
Duzib106G1929 Durio zibethinus
Duzib128G2059 Durio zibethinus
ECA233G2126 Erigeron canadensis
ECA248G2846 Erigeron canadensis
EL10Ac9g20956 Beta vulgaris
Eucgr.A01242 Eucalyptus grandis
Eucgr.K03159 Eucalyptus grandis
FAN02G2861 Fragaria x ananassa
FAN05G4716 Fragaria x ananassa
FAN09G1551 Fragaria x ananassa
FvH4_6g14310 Fragaria vesca
Glyma.03G172400 Glycine max
Glyma.10G044400 Glycine max
Glyma.13G132002 Glycine max
Glyma.19G173300 Glycine max
Gohir.A04G080300 Gossypium hirsutum
Gohir.A09G158300 Gossypium hirsutum
Gohir.A11G326100 Gossypium hirsutum
Gohir.D04G119400 Gossypium hirsutum
Gohir.D09G153700 Gossypium hirsutum
Gohir.D11G345000 Gossypium hirsutum
Gorai.006G175200 Gossypium raimondii
Gorai.007G375400 Gossypium raimondii
Gorai.012G101500 Gossypium raimondii
GSVIVG01025530001 Vitis vinifera
HanXRQChr07g0196151 Helianthus annuus
HanXRQChr11g0349321 Helianthus annuus
HanXRQChr14g0453751 Helianthus annuus
HanXRQChr14g0459281 Helianthus annuus
Haze_20742 Corylus avellana
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla
HPP92_000797 Vanilla planifolia
HPP92_009483 Vanilla planifolia
Hund00876 Selenicereus undatus
Hund07780 Selenicereus undatus
Lalb_Chr02g0153081 Lupinus albus
Lalb_Chr06g0171041 Lupinus albus
Lalb_Chr20g0113171 Lupinus albus
Lalb_Chr21g0314341 Lupinus albus
Lalb_Chr25g0289551 Lupinus albus
Lj1g0028211 Lotus japonicus
Lj2A99T58 Lonicera japonica
Lj3C971T5 Lonicera japonica
Lj5g0023302 Lotus japonicus
Lsat_1_v5_gn_1_55680 Lactuca sativa
Lsat_1_v5_gn_1_55700 Lactuca sativa
Lsat_1_v5_gn_2_110540 Lactuca sativa
Lsat_1_v5_gn_6_32400 Lactuca sativa
Manes.08G076700 Manihot esculenta
Manes.09G086700 Manihot esculenta
MBI05_g10357_MAGBIO Magnolia biondii
MD04G1121200 Malus domestica
MD12G1138400 Malus domestica
Medtr1g068825 Medicago truncatula
Medtr7g099950 Medicago truncatula
MELO3C009278.2 Cucumis melo
Migut.J00362 Erythranthe guttata
Migut.M01027 Erythranthe guttata
MSTRG.19101 Avicennia marina
MSTRG.26756 Avicennia marina
MSTRG.5685 Avicennia marina
MSTRG.7417 Avicennia marina
Nitab4.5_0000349g0070 Nicotiana tabacum
Nitab4.5_0000527g0130 Nicotiana tabacum
Nitab4.5_0002077g0110 Nicotiana tabacum
Nitab4.5_0009149g0020 Nicotiana tabacum
Nn2g10438 Nelumbo nucifera
Nn2g12918 Nelumbo nucifera
Oeu026485.2 Olea europaea
Oeu036176.1 Olea europaea
Oeu049209.1 Olea europaea
Os05g0113500 Oryza sativa ssp. japonica
Peaxi162Scf00039g01222 Petunia axillaris
Peaxi162Scf00407g00067 Petunia axillaris
PGR004G0289 Punica granatum
PGR004G1990 Punica granatum
PGR004G2702 Punica granatum
PGSC0003DMG400008929 Solanum tuberosum
PGSC0003DMG401019213 Solanum tuberosum
PGSC0003DMG402019213 Solanum tuberosum
Phvul.001G170100 Phaseolus vulgaris
Phvul.007G158100 Phaseolus vulgaris
Potri.006G082100 Populus trichocarpa
Prupe.6G250300 Prunus persica
Psat3g048840 Pisum sativum
Psat6g067720 Pisum sativum
PSO206G0053 Papaver somniferum
PSO339G0439 Papaver somniferum
PSO339G1969 Papaver somniferum
PSO648G0001 Papaver somniferum
QL05p010542 Quercus lobata
QL07p047329 Quercus lobata
RcHm_v2.0_Chr3g0467301 Rosa chinensis
Rhsim05G0188200 Rhododendron simsii
Rhsim13G0085900 Rhododendron simsii
Sabra06G0062000 Salix brachista
SalBow3G3817 Salvia bowleyana
SalBow4G2008 Salvia bowleyana
SalBow8G2190 Salvia bowleyana
Sc01g0003990 Simmondsia chinensis
Sc20g0004600 Simmondsia chinensis
Sed0018769 Sechium edule
SEGI_05191 Sequoiadendron giganteum
SEGI_11879 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33821 Striga asiatica
SGA_v2.0_scaffold1G00061 Striga asiatica
SGA_v2.0_scaffold75G24932 Striga asiatica
Solyc09g010410.3 Solanum lycopersicum
Solyc10g086360.2 Solanum lycopersicum
Sopen09g005150 Solanum pennellii
Sopen10g035740 Solanum pennellii
TAR371G1160 Trochodendron aralioides
TAR633G1790 Trochodendron aralioides
TAR636G0761 Trochodendron aralioides
Thecc.05G044400 Theobroma cacao
TPR.G21456 Trifolium pratense
TPR.G25989 Trifolium pratense
TWI53G0070 Tripterygium wilfordii
TWI74G0821 Tripterygium wilfordii
TWI77G0356 Tripterygium wilfordii
unitig_578.g15702 Utricularia gibba
vmacro03102 Vaccinium macrocarpon
vmacro08670 Vaccinium macrocarpon
vmacro20128 Vaccinium macrocarpon
VMungo0720G2610 Vigna mungo
VMungo1383G1995 Vigna mungo

User provided reference genes

Program Settings