Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34680 Brassica napus
A05p19690 Brassica napus
A05p29130 Brassica napus
Aa31LG8G6770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis
Actinidia13679 Actinidia chinensis
AL3G33640 Arabidopsis lyrata
Aqoxy3G04325 Aquilegia oxysepala
AT3G19990 Arabidopsis thaliana
ATR0124G027 Amborella trichopoda
Atru.chr11.55 Acer truncatum
Atru.chr11.58 Acer truncatum
Atru.chr11.60 Acer truncatum
Atru.chr11.61 Acer truncatum
AUR62017749 Chenopodium quinoa
AUR62032903 Chenopodium quinoa
BcaB04g20673 Brassica carinata
BcaB05g24942 Brassica carinata
BcaB06g26068 Brassica carinata
BcaB06g26576 Brassica carinata
BcaB06g26577 Brassica carinata
BcaB06g27488 Brassica carinata
BcaB06g27490 Brassica carinata
BcaB06g27492 Brassica carinata
BcaB06g27494 Brassica carinata
BcaB06g27495 Brassica carinata
BcaB08g37040 Brassica carinata
BcaB08g37041 Brassica carinata
BcaC05g28375 Brassica carinata
BcaC07g38231 Brassica carinata
BcaC07g39871 Brassica carinata
BcaC09g48955 Brassica carinata
BolC1t04373H Brassica oleracea
BolC5t33177H Brassica oleracea
BraA01t03555Z Brassica rapa
BraA05t21796Z Brassica rapa
C01p44100 Brassica napus
C05p44530 Brassica napus
C06p51380 Brassica napus
CAN.G143.62 Capsicum annuum
CANSAT78G1232 Cannabis sativa
CARHR095520 Cardamine hirsuta
Carub.0003s1989 Capsella rubella
Ca_12360_v3 Cicer arietinum L.
Ca_12363_v3 Cicer arietinum L.
Cc11_g04600 Coffea canephora
Cc11_g04630 Coffea canephora
CDE04G2894 Ceratophyllum demersum
Cfa018675 Carpinus fangiana
Ciclev10015311m.g Citrus clementina
CiPaw.15G000900 Carya illinoinensis
ClCG01G007960 Citrullus lanatus
ClCG01G007980 Citrullus lanatus
COL.COLO4_33125 Corchorus olitorius
COL.COLO4_33135 Corchorus olitorius
Cpa.g.c45316 Carica papaya
Cpa.g.sc257.7 Carica papaya
Cre16.g671500 Chlamydomonas reinhardtii
CsaV3_5G021930 Cucumis sativus L.
CSS0042488 Camellia sinensis var. sinensis
DCAR_026874 Daucus carota
Dinv37943 Davidia involucrata
Duzib132G1212 Durio zibethinus
Duzib248G1608 Durio zibethinus
ECA233G1072 Erigeron canadensis
ECA234G3608 Erigeron canadensis
ECA246G0515 Erigeron canadensis
ECA246G1911 Erigeron canadensis
EL10Ac9g23011 Beta vulgaris
Eucgr.G02594 Eucalyptus grandis
Eucgr.G02595 Eucalyptus grandis
Eucgr.G02596 Eucalyptus grandis
Eucgr.G02598 Eucalyptus grandis
Eucgr.G02607 Eucalyptus grandis
Eucgr.L03404 Eucalyptus grandis
FAN12G3670 Fragaria x ananassa
FAN17G0196 Fragaria x ananassa
FvH4_4g37300 Fragaria vesca
Glyma.09G285700 Glycine max
Gohir.A13G062700 Gossypium hirsutum
Gohir.D13G059100 Gossypium hirsutum
Gohir.D13G059200 Gossypium hirsutum
Gorai.013G066900 Gossypium raimondii
Gorai.013G067000 Gossypium raimondii
GSVIVG01034364001 Vitis vinifera
GSVIVG01034366001 Vitis vinifera
GSVIVG01034368001 Vitis vinifera
HanXRQChr09g0251301 Helianthus annuus
HanXRQChr15g0472171 Helianthus annuus
HanXRQChr17g0559591 Helianthus annuus
Haze_17403 Corylus avellana
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla
HPP92_005409 Vanilla planifolia
HPP92_022176 Vanilla planifolia
Hund24393 Selenicereus undatus
Lalb_Chr17g0337651 Lupinus albus
Lj2g0024262 Lotus japonicus
Lj3A845T90 Lonicera japonica
Lj3C845T9 Lonicera japonica
Lsat_1_v5_gn_3_35621 Lactuca sativa
Lsat_1_v5_gn_4_27720 Lactuca sativa
Lsat_1_v5_gn_8_139521 Lactuca sativa
Manes.04G161600 Manihot esculenta
Mapoly0080s0012 Marchantia polymorpha
MBI06_g12559_MAGBIO Magnolia biondii
MCO08G255 Micromonas commoda
MD13G1001600 Malus domestica
MD16G1004500 Malus domestica
Medtr0365s0010 Medicago truncatula
Medtr0400s0020 Medicago truncatula
MELO3C005084.2 Cucumis melo
Migut.L00789 Erythranthe guttata
Migut.O00611 Erythranthe guttata
MSTRG.8095 Avicennia marina
Nitab4.5_0001018g0120 Nicotiana tabacum
Nitab4.5_0001803g0070 Nicotiana tabacum
Oeu027932.1 Olea europaea
Os02g0828200 Oryza sativa ssp. japonica
Os02g0828500 Oryza sativa ssp. japonica
Os03g0251425 Oryza sativa ssp. japonica
Peaxi162Scf00603g00031 Petunia axillaris
PGR142G4147 Punica granatum
PGSC0003DMG400000979 Solanum tuberosum
Phvul.003G000800 Phaseolus vulgaris
Potri.007G001200 Populus trichocarpa
Pp3c14_4390 Physcomitrium patens
Pp3c17_21640 Physcomitrium patens
Prupe.1G350900 Prunus persica
Prupe.1G351100 Prunus persica
Psat6g100840 Pisum sativum
PSO063G7450 Papaver somniferum
PSO782G5227 Papaver somniferum
QL01p000433 Quercus lobata
QL01p000454 Quercus lobata
QL01p000540 Quercus lobata
RcHm_v2.0_Chr4g0447121 Rosa chinensis
Rhsim02G0210900 Rhododendron simsii
Sabra07G0000900 Salix brachista
SalBow2G2162 Salvia bowleyana
Sc08g0004140 Simmondsia chinensis
Sc08g0004150 Simmondsia chinensis
Sc08g0004160 Simmondsia chinensis
Sc08g0004170 Simmondsia chinensis
Sc08g0004180 Simmondsia chinensis
Sed0024681 Sechium edule
SEGI_00877 Sequoiadendron giganteum
SEGI_01054 Sequoiadendron giganteum
SEGI_02027 Sequoiadendron giganteum
SEGI_08354 Sequoiadendron giganteum
SEGI_15796 Sequoiadendron giganteum
SEGI_16211 Sequoiadendron giganteum
SEGI_22616 Sequoiadendron giganteum
SEGI_32381 Sequoiadendron giganteum
SHI10741 Sapria himalayana
SMO117G0084 Selaginella moellendorffii
Solyc11g006360.1 Solanum lycopersicum
Sopen11g002260 Solanum pennellii
Sp3g18010 Schrenkiella parvula
TAR623G0552 Trochodendron aralioides
THA.LOC104826512 Tarenaya hassleriana
Thecc.02G152900 Theobroma cacao
Thecc.02G153000 Theobroma cacao
Thhalv10020793m.g Eutrema salsugineum
TPR.G34239 Trifolium pratense
TWI74G0727 Tripterygium wilfordii
unitig_749.g13343 Utricularia gibba
VMungo0900G0001 Vigna mungo
Zm00001eb259360 Zea mays

User provided reference genes

Program Settings