Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20070 Brassica napus
Aa31LG3G10650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis
Actinidia19733 Actinidia chinensis
Actinidia34670 Actinidia chinensis
Ah.02g116780 Amaranthus hybridus
Ah.07g199480 Amaranthus hybridus
Ah.07g199550 Amaranthus hybridus
Ah.12g056770 Amaranthus hybridus
AL8G30180 Arabidopsis lyrata
Aqoxy4G00334 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea
AT5G54750 Arabidopsis thaliana
ATR0109G002 Amborella trichopoda
ATR0609G026 Amborella trichopoda
AUR62007507 Chenopodium quinoa
AUR62030012 Chenopodium quinoa
AUR62039960 Chenopodium quinoa
BcaB07g30600 Brassica carinata
BcaB07g31034 Brassica carinata
BcaC04g21960 Brassica carinata
BolC9t55449H Brassica oleracea
BraA09t37620Z Brassica rapa
C09p25460 Brassica napus
CAN.G1110.10 Capsicum annuum
CAN.G134.12 Capsicum annuum
CANSAT80G0944 Cannabis sativa
CARHR268090 Cardamine hirsuta
Carub.0008s1502 Capsella rubella
Ca_18852_v3 Cicer arietinum L.
CBR_g9060 Chara braunii
Cc05_g13280 Coffea canephora
CDE02G0163 Ceratophyllum demersum
CDE05G2537 Ceratophyllum demersum
Cfa020409 Carpinus fangiana
Cfa020410 Carpinus fangiana
Ciclev10009626m.g Citrus clementina
CiPaw.11G184500 Carya illinoinensis
CiPaw.12G126500 Carya illinoinensis
ClCG05G014740 Citrullus lanatus
COL.COLO4_05062 Corchorus olitorius
COL.COLO4_37955 Corchorus olitorius
COL.COLO4_37956 Corchorus olitorius
Cpa.g.sc2.173 Carica papaya
Cpa.g.sc97.62 Carica papaya
Cre03.g145607 Chlamydomonas reinhardtii
CsaV3_3G023130 Cucumis sativus L.
CSS0028201 Camellia sinensis var. sinensis
CSS0034391 Camellia sinensis var. sinensis
Dinv22301 Davidia involucrata
Dinv40713 Davidia involucrata
Duzib093G1201 Durio zibethinus
Duzib106G0849 Durio zibethinus
ECA236G4841 Erigeron canadensis
EL10Ac5g13057 Beta vulgaris
Eucgr.F00978 Eucalyptus grandis
Eucgr.F00980 Eucalyptus grandis
Eucgr.F03430 Eucalyptus grandis
FAN11G1314 Fragaria x ananassa
FAN16G1028 Fragaria x ananassa
FAN21G0017 Fragaria x ananassa
FAN25G1832 Fragaria x ananassa
FvH4_3g21920 Fragaria vesca
Glyma.06G269400 Glycine max
Glyma.12G135200 Glycine max
Gohir.A09G118400 Gossypium hirsutum
Gohir.D09G115300 Gossypium hirsutum
Gorai.006G132900 Gossypium raimondii
GSVIVG01002004001 Vitis vinifera
HanXRQChr02g0054141 Helianthus annuus
HanXRQChr11g0332951 Helianthus annuus
Haze_09618 Corylus avellana
Haze_09622 Corylus avellana
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla
Hund11592 Selenicereus undatus
Hund24114 Selenicereus undatus
Lalb_Chr03g0030141 Lupinus albus
Lalb_Chr19g0134771 Lupinus albus
Lj1A865T18 Lonicera japonica
Lj3g0027602 Lotus japonicus
Lsat_1_v5_gn_5_5821 Lactuca sativa
Lsat_1_v5_gn_7_108481 Lactuca sativa
Manes.03G123300 Manihot esculenta
Manes.15G076000 Manihot esculenta
Mapoly0006s0106 Marchantia polymorpha
MBI02_g10101_MAGBIO Magnolia biondii
MCO14G457 Micromonas commoda
MD03G1210500 Malus domestica
MD11G1225200 Malus domestica
Medtr4g027400 Medicago truncatula
Medtr4g081170 Medicago truncatula
Medtr8g027700 Medicago truncatula
MELO3C018102.2 Cucumis melo
Migut.H01854 Erythranthe guttata
Migut.M01809 Erythranthe guttata
MSTRG.12958 Avicennia marina
MSTRG.6892 Avicennia marina
Nitab4.5_0002229g0200 Nicotiana tabacum
Nitab4.5_0002342g0090 Nicotiana tabacum
Nitab4.5_0002838g0150 Nicotiana tabacum
Nitab4.5_0005420g0050 Nicotiana tabacum
Nn1g08677 Nelumbo nucifera
Nn5g28123 Nelumbo nucifera
Oeu007633.1 Olea europaea
Oeu032442.1 Olea europaea
Os03g0402000 Oryza sativa ssp. japonica
Os07g0642300 Oryza sativa ssp. japonica
Peaxi162Scf00082g00016 Petunia axillaris
Peaxi162Scf01434g00020 Petunia axillaris
Peaxi162Scf01475g00001 Petunia axillaris
Peaxi162Scf08257g00003 Petunia axillaris
PGR031G0276 Punica granatum
PGR083G1136 Punica granatum
PGSC0003DMG400005405 Solanum tuberosum
PGSC0003DMG400029125 Solanum tuberosum
Phvul.011G139700 Phaseolus vulgaris
Potri.001G418400 Populus trichocarpa
Pp3c2_32190 Physcomitrium patens
Pp3c6_29730 Physcomitrium patens
PRCOL_00004686 Prasinoderma coloniale
Prupe.4G204700 Prunus persica
Psat7g161320 Pisum sativum
PSO170G1932 Papaver somniferum
PSO675G8300 Papaver somniferum
PSO782G4612 Papaver somniferum
QL08p013180 Quercus lobata
RcHm_v2.0_Chr5g0037731 Rosa chinensis
Rhsim01G0090000 Rhododendron simsii
Rhsim12G0150700 Rhododendron simsii
Sabra16G0284100 Salix brachista
SalBow7G2717 Salvia bowleyana
Sc15g0001730 Simmondsia chinensis
Sc22g0000820 Simmondsia chinensis
Sed0000628 Sechium edule
Sed0012224 Sechium edule
SEGI_28528 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10288 Striga asiatica
SGA_v2.0_scaffold416G51230 Striga asiatica
SMO165G0074 Selaginella moellendorffii
Solyc01g096530.3 Solanum lycopersicum
Solyc10g006490.3 Solanum lycopersicum
Sopen01g040260 Solanum pennellii
Sopen10g002440 Solanum pennellii
Sp2g07630 Schrenkiella parvula
Sp4g10480 Schrenkiella parvula
SpUn0117_0020 Schrenkiella parvula
TAR371G0103 Trochodendron aralioides
TAR626G0300 Trochodendron aralioides
THA.LOC104799884 Tarenaya hassleriana
Thecc.05G140700 Theobroma cacao
Thhalv10019192m.g Eutrema salsugineum
TPR.G24299 Trifolium pratense
TPR.G25893 Trifolium pratense
TWI38G1569 Tripterygium wilfordii
TWI38G1856 Tripterygium wilfordii
TWI39G0061 Tripterygium wilfordii
unitig_0.g2386 Utricularia gibba
vmacro16476 Vaccinium macrocarpon
VMungo1127G0852 Vigna mungo
Zm00001eb067130 Zea mays
Zm00001eb433090 Zea mays

User provided reference genes

Program Settings