Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25460 Brassica napus
A09p34390 Brassica napus
A09p34420 Brassica napus
Aa31LG2G14180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4587 Anthoceros agrestis
Actinidia19546 Actinidia chinensis
Actinidia37713 Actinidia chinensis
AL1G45960 Arabidopsis lyrata
Aqoxy6G01376 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.75SEPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DC6XCB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J4TN1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9VNWC Arachis hypogaea
AT1G31860 Arabidopsis thaliana
ATR0602G180 Amborella trichopoda
Atru.chr11.1029 Acer truncatum
Atru.chr3.2840 Acer truncatum
AUR62008433 Chenopodium quinoa
AUR62021660 Chenopodium quinoa
BcaB03g13785 Brassica carinata
BcaB07g32843 Brassica carinata
BcaC05g27215 Brassica carinata
BcaC05g27950 Brassica carinata
BolC5t31845H Brassica oleracea
BolC5t32695H Brassica oleracea
BraA05t21430Z Brassica rapa
BraA09t38984Z Brassica rapa
BraA09t38986Z Brassica rapa
C05p31190 Brassica napus
C05p39540 Brassica napus
CAN.G767.4 Capsicum annuum
CANSAT80G1231 Cannabis sativa
CARHR031200 Cardamine hirsuta
Carub.0001s3019 Capsella rubella
Ca_08226_v3 Cicer arietinum L.
Ca_29370_v3 Cicer arietinum L.
CBR_g41148 Chara braunii
CBR_g45683 Chara braunii
Cc00_g25400 Coffea canephora
Cc02_g08450 Coffea canephora
CDE01G0632 Ceratophyllum demersum
CDE02G0170 Ceratophyllum demersum
CDE09G0075 Ceratophyllum demersum
Cfa007152 Carpinus fangiana
Ciclev10005565m.g Citrus clementina
CiPaw.07G054200 Carya illinoinensis
ClCG01G007890 Citrullus lanatus
Cpa.g.sc139.45 Carica papaya
Cre13.g576650 Chlamydomonas reinhardtii
CsaV3_5G025000 Cucumis sativus L.
CSS0015772 Camellia sinensis var. sinensis
CSS0023313 Camellia sinensis var. sinensis
CSS0049496 Camellia sinensis var. sinensis
DCAR_009570 Daucus carota
DCAR_020016 Daucus carota
Dinv33271 Davidia involucrata
Duzib084G1135 Durio zibethinus
ECA232G0163 Erigeron canadensis
EL10Ac5g11038 Beta vulgaris
Eucgr.F01985 Eucalyptus grandis
FAN02G1839 Fragaria x ananassa
FAN05G5133 Fragaria x ananassa
FAN14G0322 Fragaria x ananassa
FAN16G0073 Fragaria x ananassa
FAN21G3167 Fragaria x ananassa
FAN25G2535 Fragaria x ananassa
FvH4_3g33130 Fragaria vesca
FvH4_6g09080 Fragaria vesca
Glyma.11G241900 Glycine max
Glyma.16G046900 Glycine max
Gohir.1Z049352 Gossypium hirsutum
Gohir.1Z049452 Gossypium hirsutum
Gohir.A09G051200 Gossypium hirsutum
Gohir.D01G158300 Gossypium hirsutum
Gohir.D09G052300 Gossypium hirsutum
Gohir.D11G219700 Gossypium hirsutum
Gohir.D12G080201 Gossypium hirsutum
Gohir.D13G151150 Gossypium hirsutum
Gohir.D13G151200 Gossypium hirsutum
Gorai.002G196300 Gossypium raimondii
Gorai.005G143700 Gossypium raimondii
Gorai.006G057300 Gossypium raimondii
Gorai.007G236100 Gossypium raimondii
Gorai.008G088200 Gossypium raimondii
Gorai.013G170600 Gossypium raimondii
GSVIVG01032967001 Vitis vinifera
HanXRQChr03g0070171 Helianthus annuus
HanXRQChr05g0146191 Helianthus annuus
Haze_14968 Corylus avellana
Haze_15442 Corylus avellana
Hma1.2p1_0565F.1_g179520 Hydrangea macrophylla
HPP92_023021 Vanilla planifolia
Hund11935 Selenicereus undatus
Lalb_Chr02g0153581 Lupinus albus
Lj1A1083G27 Lonicera japonica
Lj1g0009190 Lotus japonicus
Lj2g0021694 Lotus japonicus
Lsat_1_v5_gn_9_110520 Lactuca sativa
Manes.11G075000 Manihot esculenta
Mapoly0010s0125 Marchantia polymorpha
MBI07_g07565_MAGBIO Magnolia biondii
MBI07_g13955_MAGBIO Magnolia biondii
MCO14G189 Micromonas commoda
MD03G1104300 Malus domestica
MD03G1104400 Malus domestica
MD03G1104500 Malus domestica
MD11G1131000 Malus domestica
Medtr7g084480 Medicago truncatula
MELO3C005094.2 Cucumis melo
MELO3C029404.2 Cucumis melo
MELO3C029589.2 Cucumis melo
Migut.D01934 Erythranthe guttata
MSTRG.11461 Avicennia marina
Nitab4.5_0000426g0080 Nicotiana tabacum
Nitab4.5_0002655g0020 Nicotiana tabacum
Nn1g02944 Nelumbo nucifera
Nn7g37500 Nelumbo nucifera
Nn7g37501 Nelumbo nucifera
Oeu023432.1 Olea europaea
Os01g0276500 Oryza sativa ssp. japonica
Peaxi162Scf00060g00441 Petunia axillaris
PGR142G0491 Punica granatum
PGSC0003DMG402004569 Solanum tuberosum
Phvul.001G082700 Phaseolus vulgaris
Potri.001G391400 Populus trichocarpa
Pp3c19_11880 Physcomitrium patens
PRCOL_00000818 Prasinoderma coloniale
Prupe.6G095300 Prunus persica
Prupe.6G096900 Prunus persica
Psat3g092000 Pisum sativum
PSO017G0731 Papaver somniferum
PSO478G4545 Papaver somniferum
QL02p068903 Quercus lobata
QL02p069014 Quercus lobata
QL02p069049 Quercus lobata
QL02p069093 Quercus lobata
QL02p069129 Quercus lobata
QL02p069147 Quercus lobata
QL08p064476 Quercus lobata
RcHm_v2.0_Chr5g0060441 Rosa chinensis
RcHm_v2.0_Chr5g0060451 Rosa chinensis
RcHm_v2.0_Chr7g0223141 Rosa chinensis
Rhsim01G0198500 Rhododendron simsii
Rhsim08G0038300 Rhododendron simsii
Sabra16G0256800 Salix brachista
SalBow2G1694 Salvia bowleyana
Sc07g0003880 Simmondsia chinensis
Sed0024479 Sechium edule
SEGI_19426 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31833 Striga asiatica
SHI18823 Sapria himalayana
SMO119G0194 Selaginella moellendorffii
SMO119G0521 Selaginella moellendorffii
SMO179G0001 Selaginella moellendorffii
Solyc10g005930.2 Solanum lycopersicum
Sopen10g001890 Solanum pennellii
Sp1g27580 Schrenkiella parvula
TAR374G1058 Trochodendron aralioides
TAR622G0010 Trochodendron aralioides
THA.LOC104812726 Tarenaya hassleriana
Thecc.04G049500 Theobroma cacao
Thhalv10008417m.g Eutrema salsugineum
TPR.G26467 Trifolium pratense
TWI63G0858 Tripterygium wilfordii
unitig_0.g1440 Utricularia gibba
vmacro12996 Vaccinium macrocarpon
vmacro18393 Vaccinium macrocarpon
VMungo0464G1671 Vigna mungo
Zm00001eb332710 Zea mays

User provided reference genes

Program Settings