Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08250 Brassica napus
A10p22130 Brassica napus
Aa31LG11G12400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1225 Anthoceros agrestis
Actinidia11211 Actinidia chinensis
Ah.09g232030 Amaranthus hybridus
AL6G28330 Arabidopsis lyrata
AL6G28350 Arabidopsis lyrata
Aqoxy7G00086 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4S33SI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RUK03S Arachis hypogaea
AT5G17270 Arabidopsis thaliana
AT5G37130 Arabidopsis thaliana
ATR0810G041 Amborella trichopoda
Atru.chr3.3380 Acer truncatum
AUR62027369 Chenopodium quinoa
AUR62031284 Chenopodium quinoa
AUR62031288 Chenopodium quinoa
BcaB01g04944 Brassica carinata
BcaB01g04945 Brassica carinata
BcaB01g05214 Brassica carinata
BcaB06g27300 Brassica carinata
BcaB08g36793 Brassica carinata
BcaC04g18812 Brassica carinata
BcaC08g45519 Brassica carinata
BolC3t13450H Brassica oleracea
BolC4t26161H Brassica oleracea
BolC9t58828H Brassica oleracea
BraA03t10145Z Brassica rapa
BraA10t44272Z Brassica rapa
C03p09610 Brassica napus
C04p45760 Brassica napus
C09p59920 Brassica napus
CAN.G333.6 Capsicum annuum
CANSAT78G1267 Cannabis sativa
CARHR154500 Cardamine hirsuta
CARHR154510 Cardamine hirsuta
CARHR154520 Cardamine hirsuta
CARHR154530 Cardamine hirsuta
CARHR185280 Cardamine hirsuta
CARHR195930 Cardamine hirsuta
Carub.0006s1546 Capsella rubella
Ca_17037_v3 Cicer arietinum L.
CBR_g19343 Chara braunii
Cc03_g10770 Coffea canephora
CDE09G0126 Ceratophyllum demersum
CDE09G0586 Ceratophyllum demersum
CDE11G0898 Ceratophyllum demersum
Cfa027322 Carpinus fangiana
Ciclev10030817m.g Citrus clementina
Ciclev10031527m.g Citrus clementina
Ciclev10031844m.g Citrus clementina
Ciclev10032594m.g Citrus clementina
Ciclev10033120m.g Citrus clementina
Ciclev10033525m.g Citrus clementina
Ciclev10033659m.g Citrus clementina
Ciclev10033738m.g Citrus clementina
Ciclev10033903m.g Citrus clementina
CiPaw.15G184500 Carya illinoinensis
ClCG06G014020 Citrullus lanatus
COL.COLO4_14587 Corchorus olitorius
COL.COLO4_14588 Corchorus olitorius
COL.COLO4_14589 Corchorus olitorius
COL.COLO4_19761 Corchorus olitorius
Cpa.g.sc178.29 Carica papaya
Cpa.g.sc178.30 Carica papaya
Cre09.g401700 Chlamydomonas reinhardtii
CsaV3_2G035420 Cucumis sativus L.
CSS0046717 Camellia sinensis var. sinensis
DCAR_009033 Daucus carota
Dinv04533 Davidia involucrata
Duzib106G0093 Durio zibethinus
Duzib268G1261 Durio zibethinus
ECA246G4622 Erigeron canadensis
EL10Ac8g19353 Beta vulgaris
Eucgr.H05055 Eucalyptus grandis
FAN03G0165 Fragaria x ananassa
FAN06G5080 Fragaria x ananassa
FAN10G3177 Fragaria x ananassa
FvH4_7g02460 Fragaria vesca
Glyma.04G204500 Glycine max
Glyma.06G161100 Glycine max
Gohir.A01G099200 Gossypium hirsutum
Gohir.D01G083800 Gossypium hirsutum
Gorai.002G109500 Gossypium raimondii
GSVIVG01000237001 Vitis vinifera
HanXRQChr15g0484541 Helianthus annuus
Haze_19348 Corylus avellana
Hma1.2p1_0197F.1_g085110 Hydrangea macrophylla
HPP92_011016 Vanilla planifolia
HPP92_027571 Vanilla planifolia
Hund12628 Selenicereus undatus
Hund12629 Selenicereus undatus
Hund27689 Selenicereus undatus
Hund27690 Selenicereus undatus
Lalb_Chr08g0237701 Lupinus albus
Lj1g0005856 Lotus japonicus
Lsat_1_v5_gn_3_54960 Lactuca sativa
Manes.10G067101 Manihot esculenta
Mapoly0026s0116 Marchantia polymorpha
MBI08_g12686_MAGBIO Magnolia biondii
MBI08_g20551_MAGBIO Magnolia biondii
MBI08_g38580_MAGBIO Magnolia biondii
MCO15G220 Micromonas commoda
MD10G1031900 Malus domestica
Medtr1g067520 Medicago truncatula
Medtr3g098060 Medicago truncatula
MELO3C019211.2 Cucumis melo
Migut.N00455 Erythranthe guttata
MSTRG.24596 Avicennia marina
Nitab4.5_0000617g0040 Nicotiana tabacum
Nitab4.5_0010834g0010 Nicotiana tabacum
Nn5g26963 Nelumbo nucifera
Oeu006040.1 Olea europaea
Os07g0455100 Oryza sativa ssp. japonica
Peaxi162Scf01600g00023 Petunia axillaris
PGR102G1375 Punica granatum
Phvul.009G160200 Phaseolus vulgaris
Phvul.009G192300 Phaseolus vulgaris
Potri.004G080800 Populus trichocarpa
Pp3c1_12830 Physcomitrium patens
PRCOL_00002789 Prasinoderma coloniale
Prupe.2G030300 Prunus persica
Psat5g056520 Pisum sativum
Psat5g100440 Pisum sativum
PSO063G6994 Papaver somniferum
PSO782G1025 Papaver somniferum
QL05p081774 Quercus lobata
RcHm_v2.0_Chr1g0319751 Rosa chinensis
RcHm_v2.0_Chr1g0319761 Rosa chinensis
RcHm_v2.0_Chr1g0319771 Rosa chinensis
RcHm_v2.0_Chr1g0319801 Rosa chinensis
RcHm_v2.0_Chr1g0319811 Rosa chinensis
RcHm_v2.0_Chr1g0319861 Rosa chinensis
RcHm_v2.0_Chr1g0320041 Rosa chinensis
RcHm_v2.0_Chr1g0320601 Rosa chinensis
RcHm_v2.0_Chr1g0320611 Rosa chinensis
RcHm_v2.0_Chr1g0320761 Rosa chinensis
RcHm_v2.0_Chr1g0320781 Rosa chinensis
RcHm_v2.0_Chr1g0320901 Rosa chinensis
RcHm_v2.0_Chr1g0320911 Rosa chinensis
RcHm_v2.0_Chr1g0320921 Rosa chinensis
RcHm_v2.0_Chr1g0321111 Rosa chinensis
Rhsim03G0265100 Rhododendron simsii
Sabra04G0053600 Salix brachista
Sc24g0002700 Simmondsia chinensis
Sed0016560 Sechium edule
SEGI_06721 Sequoiadendron giganteum
SEGI_18489 Sequoiadendron giganteum
SEGI_41292 Sequoiadendron giganteum
SEGI_41562 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03721 Striga asiatica
SHI30096 Sapria himalayana
SMO147G0329 Selaginella moellendorffii
Solyc07g008760.4 Solanum lycopersicum
Sopen07g004700 Solanum pennellii
Sp6g26960 Schrenkiella parvula
THA.LOC104827224 Tarenaya hassleriana
Thecc.07G183400 Theobroma cacao
Thecc.10G183000 Theobroma cacao
Thhalv10012633m.g Eutrema salsugineum
TPR.G7801 Trifolium pratense
TWI75G1732 Tripterygium wilfordii
unitig_8.g5004 Utricularia gibba
vmacro06007 Vaccinium macrocarpon
VMungo1309G0357 Vigna mungo
VMungo1309G0778 Vigna mungo
VMungo1309G2786 Vigna mungo
Zm00001eb096590 Zea mays

User provided reference genes

Program Settings