Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05730 Brassica napus
A07p01400 Brassica napus
A10p20040 Brassica napus
Aa31LG1G8760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis
Ah.14g083210 Amaranthus hybridus
AL6G31190 Arabidopsis lyrata
Aqoxy7G03896 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea
AT5G19680 Arabidopsis thaliana
ATR0705G211 Amborella trichopoda
Atru.chr3.2835 Acer truncatum
Atru.chr7.1440 Acer truncatum
AUR62010918 Chenopodium quinoa
BcaB05g23410 Brassica carinata
BcaC01g02078 Brassica carinata
BcaC01g02978 Brassica carinata
BcaC03g13699 Brassica carinata
BcaC03g15042 Brassica carinata
BcaC04g19363 Brassica carinata
BcaC04g19364 Brassica carinata
BcaC04g19365 Brassica carinata
BcaC06g33783 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus
BolC2t08664H Brassica oleracea
BolC3t18031H Brassica oleracea
BolC3t19136H Brassica oleracea
BolC4t22068H Brassica oleracea
BolC7t44210H Brassica oleracea
BolC9t58072H Brassica oleracea
BolC9t58515H Brassica oleracea
BraA02t05525Z Brassica rapa
BraA03t14262Z Brassica rapa
BraA10t44078Z Brassica rapa
C01p01530 Brassica napus
C02p31840 Brassica napus
C03p57560 Brassica napus
C03p68800 Brassica napus
C03p72980 Brassica napus
C04p04320 Brassica napus
C05p31230 Brassica napus
C07p36980 Brassica napus
C09p49510 Brassica napus
C09p52070 Brassica napus
C09p56500 Brassica napus
CAN.G274.4 Capsicum annuum
CAN.G400.4 Capsicum annuum
CAN.G525.1 Capsicum annuum
CANSAT56G2035 Cannabis sativa
CARHR193230 Cardamine hirsuta
Carub.0006s1803 Capsella rubella
Ca_17354_v3 Cicer arietinum L.
Ca_29618_v3 Cicer arietinum L.
CBR_g36965 Chara braunii
Cc06_g10300 Coffea canephora
CDE02G1631 Ceratophyllum demersum
Cfa003199 Carpinus fangiana
Ciclev10008855m.g Citrus clementina
CiPaw.03G226400 Carya illinoinensis
ClCG11G002240 Citrullus lanatus
COL.COLO4_34774 Corchorus olitorius
COL.COLO4_34775 Corchorus olitorius
Cpa.g.sc40.51 Carica papaya
Cre05.g234655 Chlamydomonas reinhardtii
CsaV3_2G001990 Cucumis sativus L.
CSS0007429 Camellia sinensis var. sinensis
CSS0045871 Camellia sinensis var. sinensis
DCAR_012049 Daucus carota
Dinv36699 Davidia involucrata
Duzib168G0201 Durio zibethinus
Duzib187G1630 Durio zibethinus
ECA234G4006 Erigeron canadensis
ECA247G2452 Erigeron canadensis
EL10Ac8g18403 Beta vulgaris
Eucgr.C03782 Eucalyptus grandis
FAN10G1780 Fragaria x ananassa
FAN10G2625 Fragaria x ananassa
FAN10G3383 Fragaria x ananassa
FAN10G3778 Fragaria x ananassa
FAN19G1571 Fragaria x ananassa
FAN19G2726 Fragaria x ananassa
FAN23G2598 Fragaria x ananassa
FAN26G0873 Fragaria x ananassa
FAN26G2762 Fragaria x ananassa
FAN28G1141 Fragaria x ananassa
FAN28G2614 Fragaria x ananassa
FvH4_1g05880 Fragaria vesca
FvH4_3g18060 Fragaria vesca
FvH4_5g23601 Fragaria vesca
Glyma.05G227700 Glycine max
Glyma.08G034700 Glycine max
Glyma.08G276800 Glycine max
Gohir.A06G066500 Gossypium hirsutum
Gohir.A13G195800 Gossypium hirsutum
Gohir.D04G104800 Gossypium hirsutum
Gohir.D06G065000 Gossypium hirsutum
Gohir.D13G201000 Gossypium hirsutum
Gorai.001G184800 Gossypium raimondii
Gorai.009G408400 Gossypium raimondii
Gorai.010G076100 Gossypium raimondii
Gorai.013G229800 Gossypium raimondii
GSVIVG01015319001 Vitis vinifera
HanXRQChr10g0318361 Helianthus annuus
Haze_09348 Corylus avellana
Haze_25808 Corylus avellana
HPP92_002875 Vanilla planifolia
Hund09241 Selenicereus undatus
Hund26252 Selenicereus undatus
Lalb_Chr05g0223141 Lupinus albus
Lalb_Chr09g0331471 Lupinus albus
Lj3g0019618 Lotus japonicus
Lj7A662T62 Lonicera japonica
Lsat_1_v5_gn_5_143861 Lactuca sativa
Manes.16G110500 Manihot esculenta
Mapoly0051s0012 Marchantia polymorpha
MBI04_g06580_MAGBIO Magnolia biondii
MBI04_g40471_MAGBIO Magnolia biondii
MBI04_g44954_MAGBIO Magnolia biondii
MD02G1060900 Malus domestica
MD03G1179500 Malus domestica
MD15G1194400 Malus domestica
Medtr8g102770 Medicago truncatula
MELO3C004581.2 Cucumis melo
Migut.J01107 Erythranthe guttata
MSTRG.6019 Avicennia marina
Nitab4.5_0000012g0030 Nicotiana tabacum
Nitab4.5_0003199g0020 Nicotiana tabacum
Nn2g11614 Nelumbo nucifera
Nn8g39121 Nelumbo nucifera
Oeu000358.1 Olea europaea
Oeu017825.1 Olea europaea
Os02g0230100 Oryza sativa ssp. japonica
Peaxi162Scf00001g00131 Petunia axillaris
Phvul.002G310000 Phaseolus vulgaris
Potri.006G163900 Populus trichocarpa
Potri.018G086200 Populus trichocarpa
Pp3c1_38690 Physcomitrium patens
Pp3c2_9120 Physcomitrium patens
PRCOL_00004941 Prasinoderma coloniale
Prupe.7G222100 Prunus persica
Psat7g016360 Pisum sativum
PSO210G6864 Papaver somniferum
PSO210G7624 Papaver somniferum
QL02p042164 Quercus lobata
RcHm_v2.0_Chr2g0091541 Rosa chinensis
RcHm_v2.0_Chr2g0091621 Rosa chinensis
Rhsim05G0041300 Rhododendron simsii
Sabra18G0074500 Salix brachista
Sc08g0007900 Simmondsia chinensis
Sed0003540 Sechium edule
SEGI_33191 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05161 Striga asiatica
SGA_v2.0_scaffold62G21556 Striga asiatica
SHI11434 Sapria himalayana
SMO337G0008 Selaginella moellendorffii
Solyc05g018150.3 Solanum lycopersicum
Sopen05g014800 Solanum pennellii
Sp6g24700 Schrenkiella parvula
TAR383G0226 Trochodendron aralioides
THA.LOC104811087 Tarenaya hassleriana
Thecc.09G102700 Theobroma cacao
Thhalv10014089m.g Eutrema salsugineum
TPR.G23501 Trifolium pratense
TWI32G1108 Tripterygium wilfordii
unitig_26.g8970 Utricularia gibba
vmacro10860 Vaccinium macrocarpon
VMungo0251G2778 Vigna mungo
Zm00001eb204970 Zea mays

User provided reference genes

Program Settings