Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36430 Brassica napus
A05p40120 Brassica napus
Aa31LG5G18700 Aethionema arabicum
Actinidia20804 Actinidia chinensis
Actinidia28545 Actinidia chinensis
Actinidia28546 Actinidia chinensis
Actinidia32575 Actinidia chinensis
Actinidia32576 Actinidia chinensis
Ah.15g089820 Amaranthus hybridus
AL3G19650 Arabidopsis lyrata
Aqoxy4G03306 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea
AT3G08650 Arabidopsis thaliana
ATR1127G216 Amborella trichopoda
Atru.chr8.66 Acer truncatum
AUR62006448 Chenopodium quinoa
AUR62029801 Chenopodium quinoa
BcaB04g18578 Brassica carinata
BcaB04g21247 Brassica carinata
BcaC01g04188 Brassica carinata
BcaC02g10326 Brassica carinata
BcaC03g17100 Brassica carinata
BcaC05g29600 Brassica carinata
BcaC07g38378 Brassica carinata
BcaC09g47981 Brassica carinata
BcaC09g50722 Brassica carinata
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus
BolC1t05497H Brassica oleracea
BolC2t11086H Brassica oleracea
BolC3t16675H Brassica oleracea
BolC3t18777H Brassica oleracea
BolC4t24562H Brassica oleracea
BolC5t34577H Brassica oleracea
BraA01t04334Z Brassica rapa
BraA03t12811Z Brassica rapa
C01p21620 Brassica napus
C02p50100 Brassica napus
C03p44040 Brassica napus
C03p44050 Brassica napus
C03p65240 Brassica napus
C04p30290 Brassica napus
C05p59200 Brassica napus
CAN.G219.48 Capsicum annuum
CANSAT55G0003 Cannabis sativa
CARHR082950 Cardamine hirsuta
Carub.0003s0778 Capsella rubella
Ca_07790_v3 Cicer arietinum L.
CBR_g164 Chara braunii
Cc02_g28240 Coffea canephora
CDE08G0114 Ceratophyllum demersum
CDE09G1233 Ceratophyllum demersum
Cfa017003 Carpinus fangiana
Ciclev10011331m.g Citrus clementina
CiPaw.09G223100 Carya illinoinensis
CiPaw.10G166300 Carya illinoinensis
ClCG04G006210 Citrullus lanatus
COL.COLO4_05675 Corchorus olitorius
COL.COLO4_06802 Corchorus olitorius
COL.COLO4_08536 Corchorus olitorius
COL.COLO4_16027 Corchorus olitorius
Cpa.g.sc0.76 Carica papaya
Cre06.g281900 Chlamydomonas reinhardtii
CsaV3_4G027360 Cucumis sativus L.
CSS0001306 Camellia sinensis var. sinensis
CSS0013897 Camellia sinensis var. sinensis
CSS0016172 Camellia sinensis var. sinensis
DCAR_029461 Daucus carota
Dinv16944 Davidia involucrata
Dinv21399 Davidia involucrata
Duzib151G0210 Durio zibethinus
ECA248G2273 Erigeron canadensis
EL10Ac7g17137 Beta vulgaris
Eucgr.K01297 Eucalyptus grandis
FAN02G3863 Fragaria x ananassa
FAN09G2297 Fragaria x ananassa
FAN14G3054 Fragaria x ananassa
FvH4_6g09450 Fragaria vesca
Glyma.09G271900 Glycine max
Glyma.18G217100 Glycine max
Gohir.A02G001800 Gossypium hirsutum
Gohir.A10G152400 Gossypium hirsutum
Gohir.D02G002100 Gossypium hirsutum
Gohir.D10G113800 Gossypium hirsutum
Gorai.005G002600 Gossypium raimondii
Gorai.011G125600 Gossypium raimondii
GSVIVG01029868001 Vitis vinifera
HanXRQChr01g0016071 Helianthus annuus
HanXRQChr04g0127351 Helianthus annuus
HanXRQChr11g0335241 Helianthus annuus
Haze_21203 Corylus avellana
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla
HPP92_026424 Vanilla planifolia
Hund03687 Selenicereus undatus
Lalb_Chr01g0023931 Lupinus albus
Lalb_Chr07g0195761 Lupinus albus
Lj1g0013582 Lotus japonicus
Lj7P587T8 Lonicera japonica
Lsat_1_v5_gn_1_105840 Lactuca sativa
Manes.08G168300 Manihot esculenta
Manes.09G122000 Manihot esculenta
Mapoly0092s0078 Marchantia polymorpha
MBI15_g31039_MAGBIO Magnolia biondii
MCO09G526 Micromonas commoda
MD04G1177600 Malus domestica
MD12G1192900 Malus domestica
Medtr3g094870 Medicago truncatula
Medtr7g074060 Medicago truncatula
MELO3C025255.2 Cucumis melo
Migut.N01780 Erythranthe guttata
MSTRG.5032 Avicennia marina
Nitab4.5_0000707g0290 Nicotiana tabacum
Nitab4.5_0006228g0020 Nicotiana tabacum
Nn5g26794 Nelumbo nucifera
Oeu006559.1 Olea europaea
Oeu049006.1 Olea europaea
Os05g0316100 Oryza sativa ssp. japonica
Peaxi162Scf00019g00011 Petunia axillaris
PGR004G2490 Punica granatum
PGSC0003DMG400006857 Solanum tuberosum
Phvul.008G079500 Phaseolus vulgaris
Phvul.010G059200 Phaseolus vulgaris
Potri.006G111200 Populus trichocarpa
Potri.016G140500 Populus trichocarpa
Pp3c6_18720 Physcomitrium patens
PRCOL_00003523 Prasinoderma coloniale
Prupe.6G297500 Prunus persica
Psat3g117200 Pisum sativum
PSO017G1041 Papaver somniferum
PSO170G1455 Papaver somniferum
PSO502G0022 Papaver somniferum
QL07p004777 Quercus lobata
QL07p031284 Quercus lobata
QL07p031617 Quercus lobata
RcHm_v2.0_Chr3g0459921 Rosa chinensis
RcHm_v2.0_Chr3g0459981 Rosa chinensis
RcHm_v2.0_Chr3g0460031 Rosa chinensis
Rhsim04G0120600 Rhododendron simsii
Sabra04G0157100 Salix brachista
Sabra06G0086400 Salix brachista
SalBow6G2214 Salvia bowleyana
Sc20g0007210 Simmondsia chinensis
Sed0001307 Sechium edule
SEGI_04146 Sequoiadendron giganteum
SEGI_20309 Sequoiadendron giganteum
SEGI_22351 Sequoiadendron giganteum
SEGI_23896 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02963 Striga asiatica
SHI12946 Sapria himalayana
SMO337G0001 Selaginella moellendorffii
Solyc01g087530.3 Solanum lycopersicum
Sopen01g034500 Solanum pennellii
Sp3g07090 Schrenkiella parvula
TAR633G1329 Trochodendron aralioides
TAR633G1452 Trochodendron aralioides
TAR636G0443 Trochodendron aralioides
THA.LOC104806653 Tarenaya hassleriana
THA.LOC104823330 Tarenaya hassleriana
Thecc.04G148100 Theobroma cacao
Thhalv10020349m.g Eutrema salsugineum
TPR.G24292 Trifolium pratense
TWI53G0780 Tripterygium wilfordii
unitig_747.g21293 Utricularia gibba
vmacro08954 Vaccinium macrocarpon
VMungo0331G1250 Vigna mungo
VMungo1383G2431 Vigna mungo
Zm00001eb408330 Zea mays

User provided reference genes

Program Settings