Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15480 Brassica napus
A03p55080 Brassica napus
Aa31sc185G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1142 Anthoceros agrestis
Actinidia15392 Actinidia chinensis
Actinidia22490 Actinidia chinensis
Actinidia22492 Actinidia chinensis
Actinidia37978 Actinidia chinensis
Ah.05g171900 Amaranthus hybridus
AL7G29130 Arabidopsis lyrata
Aqoxy6G02346 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3VK2QG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CMA0H9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SD0DCP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5GNGC Arachis hypogaea
AT4G24160 Arabidopsis thaliana
ATR0149G003 Amborella trichopoda
Atru.chr13.350 Acer truncatum
Atru.chr13.351 Acer truncatum
AUR62014419 Chenopodium quinoa
AUR62019155 Chenopodium quinoa
BcaC09g50903 Brassica carinata
BcaNung01121 Brassica carinata
BcaNung06401 Brassica carinata
BolC1t01866H Brassica oleracea
BolC7t45834H Brassica oleracea
BraA01t01487Z Brassica rapa
BraA03t14568Z Brassica rapa
C01p19380 Brassica napus
C07p53400 Brassica napus
CAN.G541.46 Capsicum annuum
CANSAT35G1895 Cannabis sativa
CARHR231560 Cardamine hirsuta
CARHR269140 Cardamine hirsuta
CARHR269150 Cardamine hirsuta
Carub.0007s1694 Capsella rubella
Ca_02057_v3 Cicer arietinum L.
Ca_13394_v3 Cicer arietinum L.
Ca_28788_v3 Cicer arietinum L.
CBR_g53937 Chara braunii
Cc10_g02050 Coffea canephora
Cfa013911 Carpinus fangiana
Cfa027320 Carpinus fangiana
Ciclev10001334m.g Citrus clementina
CiPaw.07G153600 Carya illinoinensis
ClCG08G014480 Citrullus lanatus
COL.COLO4_26191 Corchorus olitorius
COL.COLO4_27227 Corchorus olitorius
Cpa.g.sc140.24 Carica papaya
Cre01.g000300 Chlamydomonas reinhardtii
CsaV3_2G029300 Cucumis sativus L.
CSS0042982 Camellia sinensis var. sinensis
CSS0046054 Camellia sinensis var. sinensis
DCAR_009941 Daucus carota
DCAR_009944 Daucus carota
DCAR_013851 Daucus carota
Dinv31815 Davidia involucrata
Dinv39491 Davidia involucrata
Duzib093G0775 Durio zibethinus
Duzib116G0263 Durio zibethinus
ECA232G2227 Erigeron canadensis
ECA246G0823 Erigeron canadensis
EL10Ac1g00441 Beta vulgaris
Eucgr.F01623 Eucalyptus grandis
FAN15G3243 Fragaria x ananassa
FAN20G1955 Fragaria x ananassa
FvH4_2g39100 Fragaria vesca
Glyma.04G026500 Glycine max
Glyma.06G026500 Glycine max
Glyma.14G216800 Glycine max
Glyma.17G255400 Glycine max
Gohir.A05G188120 Gossypium hirsutum
Gohir.D05G191200 Gossypium hirsutum
Gohir.D05G259151 Gossypium hirsutum
Gorai.009G196500 Gossypium raimondii
Gorai.009G270900 Gossypium raimondii
GSVIVG01009830001 Vitis vinifera
HanXRQChr05g0156291 Helianthus annuus
HanXRQChr09g0269701 Helianthus annuus
Haze_22590 Corylus avellana
Haze_22591 Corylus avellana
Hma1.2p1_0773F.1_g216220 Hydrangea macrophylla
Hma1.2p1_1386F.1_g279800 Hydrangea macrophylla
HPP92_014629 Vanilla planifolia
Hund17227 Selenicereus undatus
Hund26864 Selenicereus undatus
Lalb_Chr08g0246061 Lupinus albus
Lalb_Chr22g0354451 Lupinus albus
Lj1g0021833 Lotus japonicus
Lj4C791T8 Lonicera japonica
Lj5g0006972 Lotus japonicus
Lsat_1_v5_gn_3_21400 Lactuca sativa
Lsat_1_v5_gn_4_116000 Lactuca sativa
Lsat_1_v5_gn_5_26101 Lactuca sativa
Lsat_1_v5_gn_9_64701 Lactuca sativa
Manes.18G017100 Manihot esculenta
Mapoly0037s0009 Marchantia polymorpha
MBI05_g16274_MAGBIO Magnolia biondii
MCO08G266 Micromonas commoda
MD00G1162000 Malus domestica
MD08G1017500 Malus domestica
MD15G1016400 Malus domestica
Medtr1239s0010 Medicago truncatula
Medtr1g023340 Medicago truncatula
Medtr3g113160 Medicago truncatula
MELO3C010990.2 Cucumis melo
Migut.C00795 Erythranthe guttata
Migut.N03135 Erythranthe guttata
MSTRG.1220 Avicennia marina
MSTRG.24262 Avicennia marina
Nitab4.5_0000352g0020 Nicotiana tabacum
Nitab4.5_0004368g0020 Nicotiana tabacum
Nn5g29242 Nelumbo nucifera
Oeu030387.1 Olea europaea
Oeu030389.1 Olea europaea
Oeu047750.1 Olea europaea
Os09g0520200 Oryza sativa ssp. japonica
Peaxi162Scf00186g00012 Petunia axillaris
PGR083G1299 Punica granatum
Phvul.001G009400 Phaseolus vulgaris
Phvul.009G014600 Phaseolus vulgaris
Potri.002G027300 Populus trichocarpa
Potri.005G235200 Populus trichocarpa
Pp3c9_570 Physcomitrium patens
PRCOL_00002006 Prasinoderma coloniale
Prupe.1G370200 Prunus persica
Psat5g014480 Pisum sativum
Psat6g005200 Pisum sativum
PSO541G3059 Papaver somniferum
PSO675G0784 Papaver somniferum
QL02p010782 Quercus lobata
RcHm_v2.0_Chr6g0302201 Rosa chinensis
Rhsim06G0026100 Rhododendron simsii
Rhsim07G0244700 Rhododendron simsii
Sabra02G0021500 Salix brachista
Sabra05G0181500 Salix brachista
SalBow7G3670 Salvia bowleyana
Sc15g0002560 Simmondsia chinensis
Sc26g0003230 Simmondsia chinensis
Sed0000348 Sechium edule
Sed0010010 Sechium edule
SEGI_29088 Sequoiadendron giganteum
SEGI_38743 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08098 Striga asiatica
SGA_v2.0_scaffold92G28285 Striga asiatica
SHI08091 Sapria himalayana
SMO266G0010 Selaginella moellendorffii
Solyc07g032170.3 Solanum lycopersicum
Solyc07g032180.3 Solanum lycopersicum
Sopen07g015700 Solanum pennellii
Sp7g22120 Schrenkiella parvula
TAR376G0386 Trochodendron aralioides
TAR628G0735 Trochodendron aralioides
THA.LOC104804855 Tarenaya hassleriana
THA.LOC104806900 Tarenaya hassleriana
Thecc.08G038200 Theobroma cacao
Thhalv10025308m.g Eutrema salsugineum
TPR.G30291 Trifolium pratense
TPR.G34338 Trifolium pratense
TPR.G34370 Trifolium pratense
TWI12G0121 Tripterygium wilfordii
TWI56G0721 Tripterygium wilfordii
unitig_37.g13009 Utricularia gibba
unitig_8.g3381 Utricularia gibba
vmacro04328 Vaccinium macrocarpon
vmacro21702 Vaccinium macrocarpon
VMungo0647G1986 Vigna mungo
VMungo1309G1829 Vigna mungo
Zm00001eb102970 Zea mays

User provided reference genes

Program Settings