Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09710 Brassica napus
A08p13270 Brassica napus
Aa31LG6G400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4844 Anthoceros agrestis
Actinidia29872 Actinidia chinensis
Actinidia38059 Actinidia chinensis
Ah.01g019770 Amaranthus hybridus
AL7G36940 Arabidopsis lyrata
Aqoxy1G00522 Aquilegia oxysepala
Aqoxy2G00574 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.85Q9C5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CBC9PR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8YVUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0AX16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT5IHR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE27EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ37P0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T252JQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TNR0C9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVNS6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9AGNQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZKL3GY Arachis hypogaea
AT4G17650 Arabidopsis thaliana
Atru.chr13.696 Acer truncatum
AUR62007226 Chenopodium quinoa
AUR62011389 Chenopodium quinoa
AUR62016672 Chenopodium quinoa
BcaB04g18436 Brassica carinata
BcaC07g38091 Brassica carinata
BcaC09g51623 Brassica carinata
BcaNung00072 Brassica carinata
BcaNung06715 Brassica carinata
BraA01t00914Z Brassica rapa
BraA08t33308Z Brassica rapa
C01p11320 Brassica napus
CAN.G1030.1 Capsicum annuum
CANSAT11G0235 Cannabis sativa
CANSAT25G0219 Cannabis sativa
CARHR224370 Cardamine hirsuta
Carub.0007s2373 Capsella rubella
Ca_15947_v3 Cicer arietinum L.
Ca_28688_v3 Cicer arietinum L.
CBR_g66636 Chara braunii
Cc10_g04130 Coffea canephora
CDE06G0679 Ceratophyllum demersum
CDE07G0992 Ceratophyllum demersum
Cfa012532 Carpinus fangiana
Cfa018557 Carpinus fangiana
Ciclev10002229m.g Citrus clementina
CiPaw.11G099200 Carya illinoinensis
CiPaw.12G069100 Carya illinoinensis
ClCG05G019900 Citrullus lanatus
COL.COLO4_26513 Corchorus olitorius
COL.COLO4_26873 Corchorus olitorius
Cpa.g.sc13.291 Carica papaya
Cre07.g345700 Chlamydomonas reinhardtii
CsaV3_4G034330 Cucumis sativus L.
CSS0011562 Camellia sinensis var. sinensis
CSS0013402 Camellia sinensis var. sinensis
DCAR_008795 Daucus carota
DCAR_012778 Daucus carota
DCAR_019452 Daucus carota
Dinv35958 Davidia involucrata
Duzib093G1913 Durio zibethinus
Duzib116G0163 Durio zibethinus
ECA232G1782 Erigeron canadensis
ECA247G0458 Erigeron canadensis
EL10Ac9g21781 Beta vulgaris
EL10As14g24078 Beta vulgaris
Eucgr.F00224 Eucalyptus grandis
Eucgr.F02339 Eucalyptus grandis
Eucgr.F02343 Eucalyptus grandis
Eucgr.L02367 Eucalyptus grandis
FAN15G2652 Fragaria x ananassa
FAN20G1800 Fragaria x ananassa
FAN24G2672 Fragaria x ananassa
FAN27G1360 Fragaria x ananassa
FvH4_2g34410 Fragaria vesca
Glyma.04G039100 Glycine max
Glyma.06G040100 Glycine max
Gohir.A05G202600 Gossypium hirsutum
Gohir.A06G018666 Gossypium hirsutum
Gohir.A06G060332 Gossypium hirsutum
Gohir.D01G114560 Gossypium hirsutum
Gohir.D05G205800 Gossypium hirsutum
Gohir.D06G017000 Gossypium hirsutum
Gohir.D06G118000 Gossypium hirsutum
Gorai.002G139800 Gossypium raimondii
Gorai.009G212100 Gossypium raimondii
Gorai.010G019900 Gossypium raimondii
GSVIVG01009491001 Vitis vinifera
GSVIVG01024177001 Vitis vinifera
HanXRQChr02g0039451 Helianthus annuus
HanXRQChr09g0267591 Helianthus annuus
Haze_17522 Corylus avellana
HPP92_018641 Vanilla planifolia
Hund00296 Selenicereus undatus
Hund00303 Selenicereus undatus
Hund06209 Selenicereus undatus
Lalb_Chr11g0062631 Lupinus albus
Lalb_Chr23g0267171 Lupinus albus
Lj1g0018004 Lotus japonicus
Lj4A773T42 Lonicera japonica
Lj6g0018320 Lotus japonicus
Lsat_1_v5_gn_1_21041 Lactuca sativa
Lsat_1_v5_gn_4_125661 Lactuca sativa
Manes.05G174100 Manihot esculenta
Manes.18G037500 Manihot esculenta
Mapoly0004s0036 Marchantia polymorpha
MBI15_g10497_MAGBIO Magnolia biondii
MCO12G423 Micromonas commoda
MD08G1101200 Malus domestica
MD15G1082400 Malus domestica
Medtr3g101750 Medicago truncatula
MELO3C016753.2 Cucumis melo
Migut.C00576 Erythranthe guttata
MSTRG.1350 Avicennia marina
MSTRG.22261 Avicennia marina
Nitab4.5_0000287g0250 Nicotiana tabacum
Nitab4.5_0002760g0060 Nicotiana tabacum
Nn2g14539 Nelumbo nucifera
Oeu043572.2 Olea europaea
Oeu049977.1 Olea europaea
Os01g0772400 Oryza sativa ssp. japonica
Peaxi162Scf00252g00056 Petunia axillaris
PGR031G2881 Punica granatum
PGR083G0647 Punica granatum
PGSC0003DMG401007971 Solanum tuberosum
Phvul.009G065300 Phaseolus vulgaris
Potri.002G126000 Populus trichocarpa
Pp3c21_16730 Physcomitrium patens
Pp3c22_1290 Physcomitrium patens
Prupe.1G435200 Prunus persica
Psat5g043040 Pisum sativum
PSO339G0184 Papaver somniferum
PSO384G0569 Papaver somniferum
QL12p001799 Quercus lobata
RcHm_v2.0_Chr6g0307961 Rosa chinensis
Rhsim06G0050100 Rhododendron simsii
Rhsim07G0228300 Rhododendron simsii
Sabra02G0098700 Salix brachista
SalBow7G4699 Salvia bowleyana
Sc02g0007150 Simmondsia chinensis
Sc15g0006120 Simmondsia chinensis
Sed0009126 Sechium edule
Sed0010101 Sechium edule
SEGI_03271 Sequoiadendron giganteum
SEGI_05154 Sequoiadendron giganteum
SEGI_12997 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07004 Striga asiatica
SMO340G0178 Selaginella moellendorffii
Solyc04g078890.4 Solanum lycopersicum
Sopen04g032490 Solanum pennellii
Sp7g16490 Schrenkiella parvula
TAR376G0672 Trochodendron aralioides
TAR628G1263 Trochodendron aralioides
THA.LOC104812820 Tarenaya hassleriana
Thecc.08G006900 Theobroma cacao
Thhalv10026045m.g Eutrema salsugineum
TPR.G24157 Trifolium pratense
TWI36G1266 Tripterygium wilfordii
TWI56G0083 Tripterygium wilfordii
unitig_19.g30012 Utricularia gibba
unitig_8.g5020 Utricularia gibba
vmacro04448 Vaccinium macrocarpon
vmacro21519 Vaccinium macrocarpon
VMungo1309G0269 Vigna mungo
Zm00001eb151870 Zea mays
Zm00001eb370050 Zea mays

User provided reference genes

Program Settings