Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00380 Brassica napus
Aa31LG6G15850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5499 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5500 Anthoceros agrestis
Actinidia28449 Actinidia chinensis
AL7G11450 Arabidopsis lyrata
Aqoxy5G02023 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4XN1LL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SA1CMP Arachis hypogaea
AT4G39420 Arabidopsis thaliana
ATR1120G060 Amborella trichopoda
Atru.chr4.460 Acer truncatum
AUR62003622 Chenopodium quinoa
AUR62003623 Chenopodium quinoa
AUR62017931 Chenopodium quinoa
AUR62017932 Chenopodium quinoa
BolC1t00056H Brassica oleracea
BraA01t00046Z Brassica rapa
C01p00530 Brassica napus
CAN.G1044.6 Capsicum annuum
CAN.G1044.7 Capsicum annuum
CAN.G1044.9 Capsicum annuum
CANSAT01G1143 Cannabis sativa
CARHR247290 Cardamine hirsuta
Carub.0007s0134 Capsella rubella
Ca_17683_v3 Cicer arietinum L.
CBR_g5608 Chara braunii
Cc07_g16560 Coffea canephora
CDE07G1151 Ceratophyllum demersum
CDE07G1357 Ceratophyllum demersum
Cfa002775 Carpinus fangiana
Ciclev10024679m.g Citrus clementina
CiPaw.03G132500 Carya illinoinensis
ClCG01G015940 Citrullus lanatus
COL.COLO4_22363 Corchorus olitorius
COL.COLO4_22364 Corchorus olitorius
COL.COLO4_22365 Corchorus olitorius
Cpa.g.c46795 Carica papaya
Cpa.g.sc72.10 Carica papaya
Cpa.g.sc72.11 Carica papaya
Cpa.g.sc72.12 Carica papaya
Cpa.g.sc72.14 Carica papaya
Cpa.g.sc72.15 Carica papaya
Cpa.g.sc72.8 Carica papaya
CsaV3_6G042210 Cucumis sativus L.
CSS0013219 Camellia sinensis var. sinensis
DCAR_016673 Daucus carota
DCAR_016674 Daucus carota
Dinv05635 Davidia involucrata
Dinv05988 Davidia involucrata
Dinv05989 Davidia involucrata
Dinv21242 Davidia involucrata
Duzib147G0774 Durio zibethinus
ECA233G2130 Erigeron canadensis
EL10Ac6g15255 Beta vulgaris
Eucgr.I00310 Eucalyptus grandis
FAN19G2841 Fragaria x ananassa
FAN23G0468 Fragaria x ananassa
FAN26G2965 Fragaria x ananassa
FAN28G2110 Fragaria x ananassa
FvH4_1g23050 Fragaria vesca
Glyma.05G185300 Glycine max
Glyma.08G143200 Glycine max
Gohir.A12G083100 Gossypium hirsutum
Gohir.D12G093100 Gossypium hirsutum
Gorai.008G100800 Gossypium raimondii
GSVIVG01022255001 Vitis vinifera
GSVIVG01022256001 Vitis vinifera
GSVIVG01022257001 Vitis vinifera
HanXRQChr08g0218061 Helianthus annuus
Haze_25067 Corylus avellana
Haze_25068 Corylus avellana
Haze_25069 Corylus avellana
Haze_25071 Corylus avellana
Hma1.2p1_0134F.1_g061540 Hydrangea macrophylla
HPP92_013326 Vanilla planifolia
HPP92_013327 Vanilla planifolia
HPP92_013330 Vanilla planifolia
Lalb_Chr13g0296271 Lupinus albus
Lj4C863G6 Lonicera japonica
Lj4g0014922 Lotus japonicus
Lsat_1_v5_gn_3_124661 Lactuca sativa
Lsat_1_v5_gn_9_57180 Lactuca sativa
Manes.12G144600 Manihot esculenta
Mapoly0066s0021 Marchantia polymorpha
MBI01_g36155_MAGBIO Magnolia biondii
MD15G1330600 Malus domestica
Medtr8g092100 Medicago truncatula
MELO3C007461.2 Cucumis melo
Migut.H02450 Erythranthe guttata
MSTRG.23305 Avicennia marina
Nitab4.5_0000184g0120 Nicotiana tabacum
Nitab4.5_0009050g0010 Nicotiana tabacum
Nitab4.5_0009050g0020 Nicotiana tabacum
Nn5g28841 Nelumbo nucifera
Oeu054940.1 Olea europaea
Oeu054941.1 Olea europaea
Os01g0182832 Oryza sativa ssp. japonica
Os01g0182900 Oryza sativa ssp. japonica
Peaxi162Scf00702g00610 Petunia axillaris
Peaxi162Scf00702g00611 Petunia axillaris
Peaxi162Scf00702g00617 Petunia axillaris
PGR004G2408 Punica granatum
PGSC0003DMG400026832 Solanum tuberosum
PGSC0003DMG401020957 Solanum tuberosum
PGSC0003DMG402020957 Solanum tuberosum
Phvul.002G266300 Phaseolus vulgaris
Potri.005G086100 Populus trichocarpa
Potri.007G078650 Populus trichocarpa
Pp3c10_13600 Physcomitrium patens
Pp3c3_30110 Physcomitrium patens
Pp3c7_14700 Physcomitrium patens
Prupe.6G168600 Prunus persica
Psat0s13544g0040 Pisum sativum
Psat0s5282g0080 Pisum sativum
Psat0ss6263g0080 Pisum sativum
Psat0ss6263g0240 Pisum sativum
Psat4g052480 Pisum sativum
Psat4g052520 Pisum sativum
Psat5g190880 Pisum sativum
Psat7g050200 Pisum sativum
PSO170G0015 Papaver somniferum
PSO210G1143 Papaver somniferum
QL06p031599 Quercus lobata
QL06p031619 Quercus lobata
RcHm_v2.0_Chr2g0117761 Rosa chinensis
Rhsim10G0147800 Rhododendron simsii
Sabra05G0071000 Salix brachista
SalBow6G1439 Salvia bowleyana
Sc03g0004750 Simmondsia chinensis
Sed0015867 Sechium edule
SEGI_01323 Sequoiadendron giganteum
SEGI_21320 Sequoiadendron giganteum
SEGI_28346 Sequoiadendron giganteum
SEGI_28584 Sequoiadendron giganteum
SEGI_35182 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01283 Striga asiatica
SHI11781 Sapria himalayana
SHI11782 Sapria himalayana
SHI11785 Sapria himalayana
SHI11786 Sapria himalayana
SHI11788 Sapria himalayana
SHI11789 Sapria himalayana
SHI11791 Sapria himalayana
SHI11792 Sapria himalayana
SHI11793 Sapria himalayana
SHI11794 Sapria himalayana
SHI11797 Sapria himalayana
SMO116G0288 Selaginella moellendorffii
SMO116G0345 Selaginella moellendorffii
Solyc04g051570.4 Solanum lycopersicum
Sopen04g022920 Solanum pennellii
Sp7g36440 Schrenkiella parvula
TAR628G1404 Trochodendron aralioides
TAR629G2775 Trochodendron aralioides
THA.LOC104804480 Tarenaya hassleriana
Thecc.01G115900 Theobroma cacao
Thhalv10024179m.g Eutrema salsugineum
TPR.G2248 Trifolium pratense
TPR.G2291 Trifolium pratense
TPR.G2323 Trifolium pratense
TPR.G35587 Trifolium pratense
unitig_899.g14615 Utricularia gibba
vmacro12886 Vaccinium macrocarpon
VMungo0251G0498 Vigna mungo
VMungo0251G1264 Vigna mungo
Zm00001eb062420 Zea mays

User provided reference genes

Program Settings