Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p16520 Brassica napus
A08p24000 Brassica napus
Aa31LG2G15700 Aethionema arabicum
Aa31LG6G16410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis
Actinidia00586 Actinidia chinensis
Actinidia27843 Actinidia chinensis
Actinidia32087 Actinidia chinensis
Ah.01g009470 Amaranthus hybridus
AL7G10670 Arabidopsis lyrata
AL7G16370 Arabidopsis lyrata
Aqoxy2G00577 Aquilegia oxysepala
Aqoxy5G01458 Aquilegia oxysepala
Aqoxy6G02338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea
AT4G34840 Arabidopsis thaliana
AT4G38800 Arabidopsis thaliana
ATR0089G001 Amborella trichopoda
ATR0095G001 Amborella trichopoda
Atru.chr5.3210 Acer truncatum
AUR62010110 Chenopodium quinoa
AUR62013103 Chenopodium quinoa
BcaB03g11807 Brassica carinata
BcaB03g12226 Brassica carinata
BcaC01g00256 Brassica carinata
BcaC01g00866 Brassica carinata
BolC3t19986H Brassica oleracea
BolC3t20826H Brassica oleracea
BolC7t46771H Brassica oleracea
BraA08t33620Z Brassica rapa
BraA08t34357Z Brassica rapa
C03p77330 Brassica napus
C03p85360 Brassica napus
C07p63580 Brassica napus
CAN.G588.18 Capsicum annuum
CANSAT25G0852 Cannabis sativa
CARHR243130 Cardamine hirsuta
CARHR247930 Cardamine hirsuta
Carub.0007s0065 Capsella rubella
Carub.0007s0546 Capsella rubella
Ca_29445_v3 Cicer arietinum L.
CBR_g20180 Chara braunii
Cc02_g16620 Coffea canephora
CDE02G2528 Ceratophyllum demersum
Cfa005173 Carpinus fangiana
Ciclev10029225m.g Citrus clementina
COL.COLO4_17245 Corchorus olitorius
Cpa.g.sc37.201 Carica papaya
Cre03.g162550 Chlamydomonas reinhardtii
CsaV3_7G000760 Cucumis sativus L.
DCAR_003693 Daucus carota
DCAR_028937 Daucus carota
Duzib052G0280 Durio zibethinus
Duzib132G0743 Durio zibethinus
ECA234G4736 Erigeron canadensis
EL10Ac9g21458 Beta vulgaris
Eucgr.G01748 Eucalyptus grandis
Eucgr.G01749 Eucalyptus grandis
Eucgr.G01750 Eucalyptus grandis
Eucgr.L03396 Eucalyptus grandis
FAN20G1131 Fragaria x ananassa
FAN24G0875 Fragaria x ananassa
FvH4_2g02150 Fragaria vesca
Glyma.04G005900 Glycine max
Glyma.04G006001 Glycine max
Glyma.06G005600 Glycine max
Glyma.06G005700 Glycine max
Gohir.A03G202800 Gossypium hirsutum
Gohir.D02G224100 Gossypium hirsutum
Gorai.005G251900 Gossypium raimondii
GSVIVG01024109001 Vitis vinifera
HanXRQChr10g0294891 Helianthus annuus
HanXRQChr11g0346651 Helianthus annuus
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla
HPP92_002547 Vanilla planifolia
HPP92_002565 Vanilla planifolia
Hund00051 Selenicereus undatus
Lalb_Chr11g0061251 Lupinus albus
Lj1g0011325 Lotus japonicus
Lj5A185T60 Lonicera japonica
Lj9A389T64 Lonicera japonica
Lsat_1_v5_gn_1_62181 Lactuca sativa
Lsat_1_v5_gn_3_45521 Lactuca sativa
Manes.04G078800 Manihot esculenta
Mapoly0026s0093 Marchantia polymorpha
MBI09_g11914_MAGBIO Magnolia biondii
MCO15G557 Micromonas commoda
MD10G1116600 Malus domestica
Medtr0173s0020 Medicago truncatula
Medtr1g094635 Medicago truncatula
Medtr3g117700 Medicago truncatula
MELO3C013382.2 Cucumis melo
Migut.I00211 Erythranthe guttata
MSTRG.5432 Avicennia marina
Nitab4.5_0000283g0220 Nicotiana tabacum
Nitab4.5_0000980g0360 Nicotiana tabacum
Nn5g30153 Nelumbo nucifera
Oeu002957.1 Olea europaea
Oeu055643.1 Olea europaea
Os06g0112200 Oryza sativa ssp. japonica
Peaxi162Scf00362g01054 Petunia axillaris
PGR042G1356 Punica granatum
PGR042G2276 Punica granatum
PGR042G3985 Punica granatum
PGR142G1140 Punica granatum
PGSC0003DMG400001636 Solanum tuberosum
Phvul.009G000600 Phaseolus vulgaris
Phvul.009G000700 Phaseolus vulgaris
Potri.004G167200 Populus trichocarpa
Potri.009G128700 Populus trichocarpa
Pp3c14_1450 Physcomitrium patens
Pp3c1_20870 Physcomitrium patens
Pp3c26_5320 Physcomitrium patens
PRCOL_00006969 Prasinoderma coloniale
Prupe.8G159400 Prunus persica
Prupe.8G159500 Prunus persica
Psat5g003520 Pisum sativum
PSO541G4423 Papaver somniferum
PSO541G6022 Papaver somniferum
PSO675G3214 Papaver somniferum
PSO675G5417 Papaver somniferum
QL11p047455 Quercus lobata
RcHm_v2.0_Chr6g0245651 Rosa chinensis
Rhsim01G0041000 Rhododendron simsii
Rhsim05G0063700 Rhododendron simsii
Rhsim11G0185500 Rhododendron simsii
Rhsim11G0185600 Rhododendron simsii
Rhsim11G0186700 Rhododendron simsii
Rhsim11G0186900 Rhododendron simsii
Sabra09G0098500 Salix brachista
SalBow3G1540 Salvia bowleyana
SalBow3G3146 Salvia bowleyana
Sc18g0006720 Simmondsia chinensis
Sed0017382 Sechium edule
SEGI_37242 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13240 Striga asiatica
SGA_v2.0_scaffold80G25867 Striga asiatica
SHI05673 Sapria himalayana
SMO147G0350 Selaginella moellendorffii
Solyc01g111060.4 Solanum lycopersicum
Sopen01g053120 Solanum pennellii
Sp7g32610 Schrenkiella parvula
Sp7g37020 Schrenkiella parvula
TAR381G0601 Trochodendron aralioides
TAR625G0759 Trochodendron aralioides
TAR625G0858 Trochodendron aralioides
THA.LOC104807783 Tarenaya hassleriana
THA.LOC104819635 Tarenaya hassleriana
THA.LOC109116425 Tarenaya hassleriana
Thecc.02G068100 Theobroma cacao
Thhalv10025990m.g Eutrema salsugineum
Thhalv10026821m.g Eutrema salsugineum
TPR.G38481 Trifolium pratense
TWI75G1232 Tripterygium wilfordii
TWI79G0156 Tripterygium wilfordii
unitig_0.g2353 Utricularia gibba
unitig_21.g20017 Utricularia gibba
vmacro02118 Vaccinium macrocarpon
vmacro02237 Vaccinium macrocarpon
vmacro02241 Vaccinium macrocarpon
vmacro17385 Vaccinium macrocarpon
vmacro22690 Vaccinium macrocarpon
vmacro22693 Vaccinium macrocarpon
VMungo1309G1201 Vigna mungo
VMungo1309G1253 Vigna mungo
Zm00001eb036610 Zea mays
Zm00001eb175180 Zea mays

User provided reference genes

Program Settings