Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p35060 Brassica napus
A05p00190 Brassica napus
Aa31LG1G29110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3397 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.296 Anthoceros agrestis
Actinidia21057 Actinidia chinensis
Actinidia24837 Actinidia chinensis
Ah.08g213200 Amaranthus hybridus
AL4G47340 Arabidopsis lyrata
Aqoxy2G02983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3INE6D Arachis hypogaea
AT2G47770 Arabidopsis thaliana
ATR0796G004 Amborella trichopoda
Atru.chr4.2837 Acer truncatum
Atru.chr5.1180 Acer truncatum
AUR62008617 Chenopodium quinoa
AUR62033157 Chenopodium quinoa
AUR62033169 Chenopodium quinoa
BcaB01g03159 Brassica carinata
BcaB02g08747 Brassica carinata
BcaB06g29494 Brassica carinata
BcaB06g29496 Brassica carinata
BcaB06g29497 Brassica carinata
BcaC02g06991 Brassica carinata
BcaC02g12543 Brassica carinata
BolC4t21658H Brassica oleracea
BolC4t28778H Brassica oleracea
BraA04t18942Z Brassica rapa
BraA05t19015Z Brassica rapa
C04p00110 Brassica napus
C04p72970 Brassica napus
CAN.G339.31 Capsicum annuum
CANSAT01G1893 Cannabis sativa
CANSAT78G0904 Cannabis sativa
CARHR143140 Cardamine hirsuta
Carub.0004s3048 Capsella rubella
CBR_g30074 Chara braunii
Cc01_g20660 Coffea canephora
CDE02G0764 Ceratophyllum demersum
Cfa005949 Carpinus fangiana
Cfa024112 Carpinus fangiana
Ciclev10007035m.g Citrus clementina
Ciclev10022120m.g Citrus clementina
CiPaw.07G106600 Carya illinoinensis
ClCG09G006030 Citrullus lanatus
COL.COLO4_23373 Corchorus olitorius
Cpa.g.sc9.210 Carica papaya
Cre03.g175500 Chlamydomonas reinhardtii
Cre24.g755497 Chlamydomonas reinhardtii
CsaV3_3G014620 Cucumis sativus L.
CsaV3_7G029110 Cucumis sativus L.
CSS0027100 Camellia sinensis var. sinensis
DCAR_002817 Daucus carota
Dinv19716 Davidia involucrata
Duzib052G0234 Durio zibethinus
Duzib138G0244 Durio zibethinus
ECA248G0131 Erigeron canadensis
EL10Ac3g06596 Beta vulgaris
EL10Ac6g15659 Beta vulgaris
Eucgr.B01312 Eucalyptus grandis
FAN02G4025 Fragaria x ananassa
FAN07G0961 Fragaria x ananassa
FAN15G0276 Fragaria x ananassa
FAN20G2301 Fragaria x ananassa
FAN24G2766 Fragaria x ananassa
FAN24G2873 Fragaria x ananassa
FAN27G1399 Fragaria x ananassa
FvH4_2g25400 Fragaria vesca
Glyma.03G213300 Glycine max
Glyma.09G044900 Glycine max
Glyma.15G147800 Glycine max
Gohir.A10G164100 Gossypium hirsutum
Gohir.A12G010800 Gossypium hirsutum
Gohir.D10G170400 Gossypium hirsutum
Gohir.D12G011200 Gossypium hirsutum
Gorai.008G011200 Gossypium raimondii
Gorai.011G190200 Gossypium raimondii
HanXRQChr01g0001291 Helianthus annuus
HanXRQChr10g0284631 Helianthus annuus
Haze_01203 Corylus avellana
Haze_04898 Corylus avellana
Hma1.2p1_0209F.1_g088580 Hydrangea macrophylla
HPP92_016940 Vanilla planifolia
Lalb_Chr15g0078571 Lupinus albus
Lalb_Chr18g0047121 Lupinus albus
Lalb_Chr18g0051691 Lupinus albus
Lj1C0T8 Lonicera japonica
Lj1C32T8 Lonicera japonica
Lj1g0005892 Lotus japonicus
Lj3P816T18 Lonicera japonica
Lj3P819T20 Lonicera japonica
Lj6g0000547 Lotus japonicus
Lsat_1_v5_gn_5_190540 Lactuca sativa
Lsat_1_v5_gn_9_1141 Lactuca sativa
Manes.03G195100 Manihot esculenta
Manes.04G056100 Manihot esculenta
Manes.05G063900 Manihot esculenta
Mapoly0003s0268 Marchantia polymorpha
Mapoly0050s0023 Marchantia polymorpha
MBI18_g21824_MAGBIO Magnolia biondii
MCO05G237 Micromonas commoda
MD03G1285300 Malus domestica
MD11G1304700 Malus domestica
Medtr2g436790 Medicago truncatula
Medtr7g108650 Medicago truncatula
MELO3C006663.2 Cucumis melo
MELO3C016017.2 Cucumis melo
Migut.D00197 Erythranthe guttata
Nitab4.5_0000619g0070 Nicotiana tabacum
Nitab4.5_0003901g0020 Nicotiana tabacum
Nn4g25841 Nelumbo nucifera
Nn5g27910 Nelumbo nucifera
Oeu030970.1 Olea europaea
Os05g0151200 Oryza sativa ssp. japonica
Peaxi162Scf00067g00254 Petunia axillaris
PGR031G1230 Punica granatum
PGR119G1654 Punica granatum
PGR119G2063 Punica granatum
PGSC0003DMG400035200 Solanum tuberosum
Phvul.001G205900 Phaseolus vulgaris
Phvul.009G248000 Phaseolus vulgaris
Potri.002G206100 Populus trichocarpa
Potri.010G025200 Populus trichocarpa
Potri.014G131400 Populus trichocarpa
Pp3c10_6760 Physcomitrium patens
Pp3c24_14170 Physcomitrium patens
Pp3c26_2060 Physcomitrium patens
Pp3c2_17540 Physcomitrium patens
Pp3c4_22190 Physcomitrium patens
PRCOL_00004734 Prasinoderma coloniale
Prupe.1G136800 Prunus persica
Prupe.8G258500 Prunus persica
Psat1g153880 Pisum sativum
Psat3g022920 Pisum sativum
PSO017G2667 Papaver somniferum
PSO675G8366 Papaver somniferum
QL12p027168 Quercus lobata
RcHm_v2.0_Chr4g0422241 Rosa chinensis
RcHm_v2.0_Chr6g0293581 Rosa chinensis
Rhsim01G0283900 Rhododendron simsii
Rhsim04G0221600 Rhododendron simsii
Sabra02G0153200 Salix brachista
Sabra10G0013900 Salix brachista
SalBow3G0249 Salvia bowleyana
Sc13g0003480 Simmondsia chinensis
Sed0010104 Sechium edule
Sed0018454 Sechium edule
Sed0026977 Sechium edule
SEGI_18828 Sequoiadendron giganteum
SEGI_39897 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01404 Striga asiatica
SMO115G0169 Selaginella moellendorffii
SMO144G0096 Selaginella moellendorffii
SMO340G0010 Selaginella moellendorffii
Solyc09g074910.1 Solanum lycopersicum
Sopen09g029730 Solanum pennellii
Sp4g29700 Schrenkiella parvula
TAR365G1014 Trochodendron aralioides
THA.LOC104802169 Tarenaya hassleriana
Thecc.01G297300 Theobroma cacao
Thecc.04G284700 Theobroma cacao
Thhalv10001647m.g Eutrema salsugineum
TPR.G13834 Trifolium pratense
TWI23G0022 Tripterygium wilfordii
TWI53G1241 Tripterygium wilfordii
TWI73G1192 Tripterygium wilfordii
unitig_0.g1178 Utricularia gibba
VMungo1309G0390 Vigna mungo
VMungo1383G3271 Vigna mungo
Zm00001eb354150 Zea mays

User provided reference genes

Program Settings