Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34660 Brassica napus
A06p01010 Brassica napus
Aa31LG8G2040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis
Actinidia12595 Actinidia chinensis
Actinidia21439 Actinidia chinensis
Actinidia33318 Actinidia chinensis
Ah.04g164080 Amaranthus hybridus
AL1G61960 Arabidopsis lyrata
AL1G62010 Arabidopsis lyrata
AL3G27140 Arabidopsis lyrata
Aqoxy1G01962 Aquilegia oxysepala
Aqoxy1G01964 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H8RDCT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R67SZW Arachis hypogaea
AT1G53450 Arabidopsis thaliana
AT3G14830 Arabidopsis thaliana
ATR0127G006 Amborella trichopoda
Atru.chr2.2029 Acer truncatum
Atru.chr2.2041 Acer truncatum
AUR62019617 Chenopodium quinoa
AUR62039606 Chenopodium quinoa
BcaB06g25355 Brassica carinata
BcaB07g31995 Brassica carinata
BcaB07g33329 Brassica carinata
BcaC05g25858 Brassica carinata
BcaC05g29034 Brassica carinata
BcaC08g43529 Brassica carinata
BolC5t30531H Brassica oleracea
BolC5t33929H Brassica oleracea
BolC6t35999H Brassica oleracea
BraA05t22282Z Brassica rapa
BraA06t23329Z Brassica rapa
C05p52450 Brassica napus
C06p09220 Brassica napus
CAN.G375.32 Capsicum annuum
CANSAT56G2087 Cannabis sativa
CARHR043670 Cardamine hirsuta
CARHR089770 Cardamine hirsuta
Carub.0001s4264 Capsella rubella
Carub.0003s1449 Capsella rubella
Ca_03941_v3 Cicer arietinum L.
Cc05_g10890 Coffea canephora
CDE02G2021 Ceratophyllum demersum
CDE06G0863 Ceratophyllum demersum
CDE09G0238 Ceratophyllum demersum
Cfa019528 Carpinus fangiana
Ciclev10019972m.g Citrus clementina
CiPaw.11G157600 Carya illinoinensis
CiPaw.12G111300 Carya illinoinensis
ClCG11G017260 Citrullus lanatus
COL.COLO4_17523 Corchorus olitorius
Cpa.g.sc77.46 Carica papaya
CsaV3_4G032910 Cucumis sativus L.
CSS0001873 Camellia sinensis var. sinensis
CSS0042666 Camellia sinensis var. sinensis
DCAR_013267 Daucus carota
Dinv15009 Davidia involucrata
Dinv18386 Davidia involucrata
Duzib213G1096 Durio zibethinus
ECA234G0958 Erigeron canadensis
ECA240G3777 Erigeron canadensis
EL10Ac4g08396 Beta vulgaris
EL10Ac9g22809 Beta vulgaris
Eucgr.F01300 Eucalyptus grandis
FAN11G2611 Fragaria x ananassa
FAN16G0401 Fragaria x ananassa
FAN21G0088 Fragaria x ananassa
FAN25G1025 Fragaria x ananassa
FvH4_3g17970 Fragaria vesca
Glyma.12G231700 Glycine max
Glyma.13G266400 Glycine max
Gohir.A01G052900 Gossypium hirsutum
Gohir.A02G079101 Gossypium hirsutum
Gohir.A11G228702 Gossypium hirsutum
Gohir.A13G149900 Gossypium hirsutum
Gohir.D01G042500 Gossypium hirsutum
Gohir.D04G018433 Gossypium hirsutum
Gohir.D13G154200 Gossypium hirsutum
Gorai.001G168800 Gossypium raimondii
Gorai.002G053300 Gossypium raimondii
Gorai.010G164000 Gossypium raimondii
Gorai.013G174200 Gossypium raimondii
GSVIVG01014152001 Vitis vinifera
HanXRQChr10g0305531 Helianthus annuus
HanXRQChr17g0556791 Helianthus annuus
Haze_09266 Corylus avellana
Haze_09267 Corylus avellana
Haze_09268 Corylus avellana
Haze_09270 Corylus avellana
Haze_11864 Corylus avellana
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla
HPP92_005189 Vanilla planifolia
Hund10457 Selenicereus undatus
Lalb_Chr03g0031251 Lupinus albus
Lalb_Chr19g0133751 Lupinus albus
Lalb_Chr25g0285681 Lupinus albus
Lj1A826G61 Lonicera japonica
Lj3g0004524 Lotus japonicus
Lsat_1_v5_gn_9_100501 Lactuca sativa
Manes.03G091700 Manihot esculenta
Manes.15G097400 Manihot esculenta
Mapoly0001s0101 Marchantia polymorpha
Mapoly0030s0045 Marchantia polymorpha
MBI06_g16571_MAGBIO Magnolia biondii
MD03G1246300 Malus domestica
MD11G1267300 Malus domestica
Medtr2g075340 Medicago truncatula
MELO3C025660.2 Cucumis melo
Migut.H02018 Erythranthe guttata
MSTRG.14976 Avicennia marina
Nitab4.5_0000347g0180 Nicotiana tabacum
Nitab4.5_0024430g0010 Nicotiana tabacum
Nn3g21055 Nelumbo nucifera
Nn6g34456 Nelumbo nucifera
Oeu010027.3 Olea europaea
Oeu058459.1 Olea europaea
Os01g0729900 Oryza sativa ssp. japonica
Os02g0510400 Oryza sativa ssp. japonica
Os05g0530300 Oryza sativa ssp. japonica
Os06g0152800 Oryza sativa ssp. japonica
Peaxi162Scf00111g01477 Petunia axillaris
PGR083G0816 Punica granatum
PGSC0003DMG400007094 Solanum tuberosum
Phvul.005G079200 Phaseolus vulgaris
Potri.001G386700 Populus trichocarpa
Potri.003G026500 Populus trichocarpa
Potri.011G106600 Populus trichocarpa
Pp3c9_8060 Physcomitrium patens
Prupe.4G158300 Prunus persica
Psat5g113520 Pisum sativum
Psat5g234480 Pisum sativum
PSO170G1443 Papaver somniferum
PSO782G0021 Papaver somniferum
QL08p025853 Quercus lobata
QL08p025867 Quercus lobata
RcHm_v2.0_Chr5g0030011 Rosa chinensis
Rhsim04G0035400 Rhododendron simsii
Rhsim04G0036400 Rhododendron simsii
Sabra11G0094900 Salix brachista
Sabra16G0254300 Salix brachista
SalBow7G0391 Salvia bowleyana
Sc03g0010640 Simmondsia chinensis
Sed0003063 Sechium edule
SEGI_28417 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34274 Striga asiatica
SMO169G0186 Selaginella moellendorffii
Solyc07g062250.3 Solanum lycopersicum
Sopen07g030520 Solanum pennellii
Sp1g39990 Schrenkiella parvula
TAR627G0919 Trochodendron aralioides
TAR629G2423 Trochodendron aralioides
THA.LOC104810428 Tarenaya hassleriana
THA.LOC104815577 Tarenaya hassleriana
Thecc.07G119700 Theobroma cacao
Thhalv10011465m.g Eutrema salsugineum
TPR.G13030 Trifolium pratense
TWI38G0344 Tripterygium wilfordii
TWI39G0561 Tripterygium wilfordii
unitig_21.g20061 Utricularia gibba
vmacro09408 Vaccinium macrocarpon
VMungo0251G3124 Vigna mungo
VMungo1080G1533 Vigna mungo
VMungo1309G0651 Vigna mungo
VMungo1309G1261 Vigna mungo
Zm00001eb154220 Zea mays
Zm00001eb271010 Zea mays
Zm00001eb293260 Zea mays
Zm00001eb361900 Zea mays

User provided reference genes

Program Settings