Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p60140 Brassica napus
Aa31LG7G3020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis
Actinidia08713 Actinidia chinensis
Actinidia18690 Actinidia chinensis
Actinidia28288 Actinidia chinensis
Actinidia34284 Actinidia chinensis
Ah.13g070980 Amaranthus hybridus
AL1G30350 Arabidopsis lyrata
Aqoxy5G04387 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea
AT1G18000 Arabidopsis thaliana
AT1G18010 Arabidopsis thaliana
ATR0579G031 Amborella trichopoda
Atru.chr12.2510 Acer truncatum
Atru.chr12.2532 Acer truncatum
Atru.chr13.384 Acer truncatum
Atru.chr5.814 Acer truncatum
AUR62005954 Chenopodium quinoa
AUR62028110 Chenopodium quinoa
BolC8t51904H Brassica oleracea
BraA09t41383Z Brassica rapa
C08p43580 Brassica napus
CAN.G303.51 Capsicum annuum
CANSAT01G3090 Cannabis sativa
CANSAT11G0263 Cannabis sativa
CARHR018600 Cardamine hirsuta
Carub.0001s1769 Capsella rubella
Ca_16836_v3 Cicer arietinum L.
Cc02_g00640 Coffea canephora
Cc02_g00650 Coffea canephora
Cc02_g00660 Coffea canephora
CDE02G4135 Ceratophyllum demersum
Cfa016133 Carpinus fangiana
Cfa016134 Carpinus fangiana
Ciclev10019944m.g Citrus clementina
Ciclev10024344m.g Citrus clementina
CiPaw.05G208300 Carya illinoinensis
ClCG00G006070 Citrullus lanatus
ClCG10G008670 Citrullus lanatus
ClCG10G008690 Citrullus lanatus
COL.COLO4_04975 Corchorus olitorius
COL.COLO4_23082 Corchorus olitorius
Cpa.g.c30701.1 Carica papaya
Cpa.g.sc3.179 Carica papaya
CsaV3_4G009000 Cucumis sativus L.
CsaV3_4G009010 Cucumis sativus L.
CSS0024166 Camellia sinensis var. sinensis
CSS0027564 Camellia sinensis var. sinensis
DCAR_010563 Daucus carota
DCAR_014598 Daucus carota
DCAR_020387 Daucus carota
Dinv17282 Davidia involucrata
Duzib128G1652 Durio zibethinus
Duzib138G0998 Durio zibethinus
ECA233G4741 Erigeron canadensis
EL10Ac3g05140 Beta vulgaris
Eucgr.K00457 Eucalyptus grandis
Eucgr.K00891 Eucalyptus grandis
Eucgr.K00892 Eucalyptus grandis
FAN01G2649 Fragaria x ananassa
FAN03G2936 Fragaria x ananassa
FAN03G3145 Fragaria x ananassa
FAN10G3640 Fragaria x ananassa
FAN10G4294 Fragaria x ananassa
FvH4_7g33150 Fragaria vesca
FvH4_7g33230 Fragaria vesca
Glyma.02G221600 Glycine max
Glyma.04G226100 Glycine max
Glyma.06G138800 Glycine max
Gohir.A11G102900 Gossypium hirsutum
Gohir.A13G001800 Gossypium hirsutum
Gohir.D11G107400 Gossypium hirsutum
Gohir.D13G001200 Gossypium hirsutum
Gorai.007G115000 Gossypium raimondii
Gorai.013G001100 Gossypium raimondii
GSVIVG01038674001 Vitis vinifera
HanXRQChr08g0225831 Helianthus annuus
HanXRQChr15g0472111 Helianthus annuus
Haze_00327 Corylus avellana
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla
HPP92_015066 Vanilla planifolia
Hund09750 Selenicereus undatus
Lalb_Chr11g0067541 Lupinus albus
Lalb_Chr23g0272031 Lupinus albus
Lj1g0001658 Lotus japonicus
Lj1g0023378 Lotus japonicus
Lj3A892T30 Lonicera japonica
Lsat_1_v5_gn_2_3341 Lactuca sativa
Manes.01G045000 Manihot esculenta
Mapoly0086s0058 Marchantia polymorpha
MBI04_g09827_MAGBIO Magnolia biondii
MBI04_g26128_MAGBIO Magnolia biondii
MBI04_g26129_MAGBIO Magnolia biondii
MD01G1230600 Malus domestica
MD01G1230700 Malus domestica
MD01G1230800 Malus domestica
MD01G1230900 Malus domestica
MD07G1302200 Malus domestica
Medtr3g093270 Medicago truncatula
Medtr3g093290 Medicago truncatula
MELO3C018979.2 Cucumis melo
MELO3C018981.2 Cucumis melo
Migut.F00972 Erythranthe guttata
MSTRG.23 Avicennia marina
Nitab4.5_0000021g0150 Nicotiana tabacum
Nitab4.5_0004582g0010 Nicotiana tabacum
Nn4g24300 Nelumbo nucifera
Oeu017360.1 Olea europaea
Oeu017361.2 Olea europaea
Os04g0105400 Oryza sativa ssp. japonica
Peaxi162Scf01026g00266 Petunia axillaris
PGR142G3661 Punica granatum
PGSC0003DMG400000551 Solanum tuberosum
Phvul.008G188500 Phaseolus vulgaris
Phvul.009G039900 Phaseolus vulgaris
Potri.012G005100 Populus trichocarpa
Potri.012G011000 Populus trichocarpa
Pp3c23_3660 Physcomitrium patens
Prupe.2G321300 Prunus persica
Psat0s1240g0080 Pisum sativum
PSO063G4813 Papaver somniferum
PSO782G2863 Papaver somniferum
QL09p006127 Quercus lobata
RcHm_v2.0_Chr1g0383221 Rosa chinensis
Rhsim03G0217900 Rhododendron simsii
Rhsim03G0218000 Rhododendron simsii
Sabra12G0000800 Salix brachista
Sabra12G0007100 Salix brachista
Sabra15G0000900 Salix brachista
SalBow4G1948 Salvia bowleyana
Sc19g0000410 Simmondsia chinensis
Sed0000759 Sechium edule
Sed0008601 Sechium edule
SEGI_05818 Sequoiadendron giganteum
SEGI_06275 Sequoiadendron giganteum
SEGI_07746 Sequoiadendron giganteum
SEGI_09338 Sequoiadendron giganteum
SEGI_21716 Sequoiadendron giganteum
SEGI_40229 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08489 Striga asiatica
SGA_v2.0_scaffold44G16868 Striga asiatica
SMO239G0122 Selaginella moellendorffii
SMO340G0156 Selaginella moellendorffii
Solyc03g080020.4 Solanum lycopersicum
Sopen03g021740 Solanum pennellii
Sp1g16050 Schrenkiella parvula
TAR375G1015 Trochodendron aralioides
TAR629G1812 Trochodendron aralioides
TAR629G3485 Trochodendron aralioides
THA.LOC104814953 Tarenaya hassleriana
Thecc.01G329300 Theobroma cacao
Thecc.05G121800 Theobroma cacao
Thhalv10007558m.g Eutrema salsugineum
TPR.G22104 Trifolium pratense
TPR.G29284 Trifolium pratense
TWI23G0162 Tripterygium wilfordii
TWI23G0209 Tripterygium wilfordii
unitig_578.g16680 Utricularia gibba
unitig_578.g16681 Utricularia gibba
vmacro06469 Vaccinium macrocarpon
vmacro06470 Vaccinium macrocarpon
VMungo0647G0805 Vigna mungo
VMungo1309G1903 Vigna mungo
VMungo1383G1334 Vigna mungo
Zm00001eb418750 Zea mays

User provided reference genes

Program Settings