Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p00480 Brassica napus
Aa31LG1G10760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2892 Anthoceros agrestis
Actinidia10064 Actinidia chinensis
Actinidia20155 Actinidia chinensis
Ah.05g180200 Amaranthus hybridus
AL1G10900 Arabidopsis lyrata
Aqoxy7G00189 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G1BLE5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y78NPN Arachis hypogaea
AT1G01510 Arabidopsis thaliana
ATR0661G136 Amborella trichopoda
Atru.chr5.554 Acer truncatum
AUR62004405 Chenopodium quinoa
AUR62022611 Chenopodium quinoa
AUR62028439 Chenopodium quinoa
BcaB03g13589 Brassica carinata
BolC5t28840H Brassica oleracea
BraA10t42327Z Brassica rapa
C05p00510 Brassica napus
CAN.G78.121 Capsicum annuum
CANSAT56G2748 Cannabis sativa
CARHR000860 Cardamine hirsuta
Carub.0001s0073 Capsella rubella
Ca_07939_v3 Cicer arietinum L.
CBR_g48408 Chara braunii
Cc02_g38470 Coffea canephora
CDE02G4181 Ceratophyllum demersum
CDE11G0755 Ceratophyllum demersum
Cfa003879 Carpinus fangiana
Ciclev10019285m.g Citrus clementina
CiPaw.01G065900 Carya illinoinensis
CiPaw.02G034000 Carya illinoinensis
ClCG05G001290 Citrullus lanatus
COL.COLO4_12769 Corchorus olitorius
Cpa.g.sc184.28 Carica papaya
CsaV3_3G008650 Cucumis sativus L.
CSS0009771 Camellia sinensis var. sinensis
DCAR_008636 Daucus carota
Dinv32515 Davidia involucrata
Dinv43858 Davidia involucrata
Duzib133G0727 Durio zibethinus
Duzib138G1274 Durio zibethinus
ECA236G4877 Erigeron canadensis
EL10Ac1g00363 Beta vulgaris
EL10Ac3g06780 Beta vulgaris
Eucgr.D02321 Eucalyptus grandis
FAN01G2783 Fragaria x ananassa
FAN03G2760 Fragaria x ananassa
FAN06G0709 Fragaria x ananassa
FAN06G0792 Fragaria x ananassa
FAN06G4247 Fragaria x ananassa
FAN10G1735 Fragaria x ananassa
FAN10G1927 Fragaria x ananassa
FvH4_7g15180 Fragaria vesca
Glyma.09G255200 Glycine max
Glyma.18G237800 Glycine max
Gohir.A08G132500 Gossypium hirsutum
Gohir.A11G091900 Gossypium hirsutum
Gohir.D08G153900 Gossypium hirsutum
Gohir.D11G096700 Gossypium hirsutum
Gorai.004G159800 Gossypium raimondii
Gorai.007G103000 Gossypium raimondii
GSVIVG01026958001 Vitis vinifera
GSVIVG01026959001 Vitis vinifera
HanXRQChr04g0121381 Helianthus annuus
HanXRQChr06g0170301 Helianthus annuus
Haze_15555 Corylus avellana
Hma1.2p1_0018F.1_g013550 Hydrangea macrophylla
Hma1.2p1_0623F.1_g191015 Hydrangea macrophylla
Hma1.2p1_0627F.1_g191690 Hydrangea macrophylla
Hma1.2p1_2961F.1_g330910 Hydrangea macrophylla
HPP92_003462 Vanilla planifolia
HPP92_003463 Vanilla planifolia
Hund16641 Selenicereus undatus
Hund16674 Selenicereus undatus
Hund27248 Selenicereus undatus
Lalb_Chr03g0038301 Lupinus albus
Lalb_Chr19g0126891 Lupinus albus
Lj1g0024287 Lotus japonicus
Lj9A588G64 Lonicera japonica
Lsat_1_v5_gn_7_3821 Lactuca sativa
Manes.01G252900 Manihot esculenta
Manes.05G030100 Manihot esculenta
Mapoly0077s0060 Marchantia polymorpha
MBI04_g15071_MAGBIO Magnolia biondii
MD01G1070100 Malus domestica
MD07G1132400 Malus domestica
Medtr7g078990 Medicago truncatula
MELO3C006085.2 Cucumis melo
Migut.N01462 Erythranthe guttata
MSTRG.17294 Avicennia marina
MSTRG.28234 Avicennia marina
MSTRG.4838 Avicennia marina
Nitab4.5_0000915g0160 Nicotiana tabacum
Nitab4.5_0022943g0010 Nicotiana tabacum
Nn1g01661 Nelumbo nucifera
Nn6g32432 Nelumbo nucifera
Oeu018961.1 Olea europaea
Oeu054345.1 Olea europaea
Os03g0126100 Oryza sativa ssp. japonica
Os10g0533000 Oryza sativa ssp. japonica
Peaxi162Scf00020g01226 Petunia axillaris
PGR031G0269 Punica granatum
PGSC0003DMG400000190 Solanum tuberosum
Phvul.008G058900 Phaseolus vulgaris
Potri.002G163200 Populus trichocarpa
Potri.014G089400 Populus trichocarpa
Pp3c15_25330 Physcomitrium patens
Pp3c3_30270 Physcomitrium patens
Pp3c8_4660 Physcomitrium patens
Pp3c9_22880 Physcomitrium patens
PRCOL_00003376 Prasinoderma coloniale
Prupe.2G176300 Prunus persica
Psat3g106200 Pisum sativum
PSO478G1271 Papaver somniferum
PSO782G2833 Papaver somniferum
QL04p055168 Quercus lobata
RcHm_v2.0_Chr1g0356181 Rosa chinensis
RcHm_v2.0_Chr1g0357601 Rosa chinensis
RcHm_v2.0_Chr1g0357901 Rosa chinensis
RcHm_v2.0_Chr1g0357951 Rosa chinensis
RcHm_v2.0_Chr1g0357961 Rosa chinensis
RcHm_v2.0_Chr1g0357981 Rosa chinensis
RcHm_v2.0_Chr1g0357991 Rosa chinensis
RcHm_v2.0_Chr1g0358001 Rosa chinensis
RcHm_v2.0_Chr1g0358011 Rosa chinensis
RcHm_v2.0_Chr1g0358021 Rosa chinensis
RcHm_v2.0_Chr1g0358061 Rosa chinensis
RcHm_v2.0_Chr1g0358071 Rosa chinensis
RcHm_v2.0_Chr1g0358081 Rosa chinensis
RcHm_v2.0_Chr1g0358101 Rosa chinensis
RcHm_v2.0_Chr1g0358111 Rosa chinensis
RcHm_v2.0_Chr1g0358141 Rosa chinensis
RcHm_v2.0_Chr1g0358151 Rosa chinensis
RcHm_v2.0_Chr1g0358161 Rosa chinensis
RcHm_v2.0_Chr5g0017371 Rosa chinensis
RcHm_v2.0_Chr7g0215581 Rosa chinensis
Rhsim07G0011100 Rhododendron simsii
Sabra02G0147300 Salix brachista
Sabra14G0065100 Salix brachista
SalBow3G2657 Salvia bowleyana
SalBow5G0787 Salvia bowleyana
SalBow5G4419 Salvia bowleyana
Sc23g0002600 Simmondsia chinensis
Sed0003876 Sechium edule
Sed0010543 Sechium edule
SEGI_14155 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05679 Striga asiatica
SGA_v2.0_scaffold43G16391 Striga asiatica
SHI13389 Sapria himalayana
SHI13391 Sapria himalayana
SMO259G0050 Selaginella moellendorffii
Solyc01g095040.3 Solanum lycopersicum
Sopen01g038830 Solanum pennellii
Sp1g00800 Schrenkiella parvula
TAR629G2568 Trochodendron aralioides
TAR636G3175 Trochodendron aralioides
THA.LOC104801394 Tarenaya hassleriana
Thecc.01G353300 Theobroma cacao
Thhalv10007060m.g Eutrema salsugineum
TPR.G22297 Trifolium pratense
TWI59G0388 Tripterygium wilfordii
unitig_0.g2768 Utricularia gibba
unitig_0.g2769 Utricularia gibba
unitig_748.g7106 Utricularia gibba
vmacro13237 Vaccinium macrocarpon
VMungo1383G0046 Vigna mungo
Zm00001eb001910 Zea mays
Zm00001eb021820 Zea mays

User provided reference genes

Program Settings