Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17580 Brassica napus
A03p13340 Brassica napus
A03p56610 Brassica napus
A05p17500 Brassica napus
A05p35990 Brassica napus
A05p43490 Brassica napus
A06p00220 Brassica napus
A08p00680 Brassica napus
A10p13890 Brassica napus
Aa31LG10G1170 Aethionema arabicum
Aa31LG3G12400 Aethionema arabicum
Aa31LG3G710 Aethionema arabicum
Aa31LG8G700 Aethionema arabicum
Ah.13g075420 Amaranthus hybridus
AL1G63420 Arabidopsis lyrata
AL3G25410 Arabidopsis lyrata
AL7G26620 Arabidopsis lyrata
AL8G32280 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.K19UZV Arachis hypogaea
AT1G55365 Arabidopsis thaliana
AT3G13500 Arabidopsis thaliana
AT5G56520 Arabidopsis thaliana
ATR0737G017 Amborella trichopoda
Atru.chr3.2107 Acer truncatum
BcaB01g04405 Brassica carinata
BcaB02g10824 Brassica carinata
BcaB04g16959 Brassica carinata
BcaC01g01518 Brassica carinata
BcaC03g14217 Brassica carinata
BcaC04g20079 Brassica carinata
BcaC05g29894 Brassica carinata
BcaC05g30244 Brassica carinata
BcaC05g30291 Brassica carinata
BcaC06g32758 Brassica carinata
BcaC08g43286 Brassica carinata
BcaC08g43620 Brassica carinata
BcaC08g44196 Brassica carinata
BcaC09g50691 Brassica carinata
BcaNung02428 Brassica carinata
BolC1t02148H Brassica oleracea
BolC3t13997H Brassica oleracea
BolC3t21580H Brassica oleracea
BolC5t34968H Brassica oleracea
BolC6t36110H Brassica oleracea
BolC6t36802H Brassica oleracea
BolC7t45970H Brassica oleracea
BolC9t57661H Brassica oleracea
BraA01t01711Z Brassica rapa
BraA03t14731Z Brassica rapa
BraA05t20644Z Brassica rapa
BraA05t22405Z Brassica rapa
BraA05t23089Z Brassica rapa
BraA06t23238Z Brassica rapa
BraA08t32126Z Brassica rapa
BraA10t43481Z Brassica rapa
C01p22180 Brassica napus
C02p15170 Brassica napus
C03p15600 Brassica napus
C03p92680 Brassica napus
C06p10340 Brassica napus
C07p54810 Brassica napus
C09p48110 Brassica napus
CAN.G960.46 Capsicum annuum
CANSAT11G0501 Cannabis sativa
CARHR045030 Cardamine hirsuta
CARHR088170 Cardamine hirsuta
CARHR233900 Cardamine hirsuta
CARHR270170 Cardamine hirsuta
Carub.0001s4388 Capsella rubella
Carub.0003s0313 Capsella rubella
Carub.0003s1297 Capsella rubella
Carub.0007s1461 Capsella rubella
Carub.0008s1700 Capsella rubella
Cc01_g00130 Coffea canephora
Cc06_g23020 Coffea canephora
Ciclev10017215m.g Citrus clementina
Ciclev10023092m.g Citrus clementina
CiPaw.09G002200 Carya illinoinensis
CiPaw.13G177400 Carya illinoinensis
ClCG02G024390 Citrullus lanatus
ClCG10G013400 Citrullus lanatus
Cpa.g.c44905 Carica papaya
Cpa.g.sc51.119 Carica papaya
CSS0017288 Camellia sinensis var. sinensis
DCAR_023854 Daucus carota
ECA248G0157 Erigeron canadensis
Eucgr.B03601 Eucalyptus grandis
FAN11G0915 Fragaria x ananassa
FAN16G1350 Fragaria x ananassa
FAN21G2465 Fragaria x ananassa
FAN25G2990 Fragaria x ananassa
FvH4_3g45760 Fragaria vesca
FvH4_4g27600 Fragaria vesca
Glyma.08G125200 Glycine max
Glyma.19G112300 Glycine max
Gohir.A12G175500 Gossypium hirsutum
Gohir.D12G178750 Gossypium hirsutum
Gorai.008G191500 Gossypium raimondii
HanXRQChr01g0021421 Helianthus annuus
HanXRQChr02g0057501 Helianthus annuus
Haze_19423 Corylus avellana
Haze_22939 Corylus avellana
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla
HPP92_015924 Vanilla planifolia
Lalb_Chr07g0185901 Lupinus albus
Lalb_Chr13g0295561 Lupinus albus
Lalb_Chr14g0364521 Lupinus albus
Lj1g0005734 Lotus japonicus
Lj4g0013694 Lotus japonicus
Lsat_1_v5_gn_1_59720 Lactuca sativa
Lsat_1_v5_gn_1_68820 Lactuca sativa
Lsat_1_v5_gn_2_50221 Lactuca sativa
Manes.03G087303 Manihot esculenta
Manes.08G144511 Manihot esculenta
Manes.09G141000 Manihot esculenta
Manes.15G109500 Manihot esculenta
MD03G1003400 Malus domestica
MD11G1003200 Malus domestica
Medtr7g085660 Medicago truncatula
Medtr8g088460 Medicago truncatula
MELO3C026884.2 Cucumis melo
Migut.J01885 Erythranthe guttata
Migut.N00553 Erythranthe guttata
Nitab4.5_0000528g0100 Nicotiana tabacum
Nitab4.5_0005935g0010 Nicotiana tabacum
Nn2g15861 Nelumbo nucifera
Nn7g35858 Nelumbo nucifera
Os03g0807000 Oryza sativa ssp. japonica
Peaxi162Scf00003g04814 Petunia axillaris
Peaxi162Scf00078g00515 Petunia axillaris
PGR102G2770 Punica granatum
PGSC0003DMG400008382 Solanum tuberosum
PGSC0003DMG400023737 Solanum tuberosum
PGSC0003DMG400033149 Solanum tuberosum
PGSC0003DMG400037247 Solanum tuberosum
Phvul.001G111100 Phaseolus vulgaris
Phvul.002G247400 Phaseolus vulgaris
Potri.001G003500 Populus trichocarpa
Potri.003G221500 Populus trichocarpa
Potri.013G057766 Populus trichocarpa
Potri.013G057832 Populus trichocarpa
Prupe.6G003100 Prunus persica
Prupe.7G004500 Prunus persica
Psat7g063840 Pisum sativum
QL01p003617 Quercus lobata
QL04p040762 Quercus lobata
RcHm_v2.0_Chr5g0083831 Rosa chinensis
Sed0004008 Sechium edule
Sed0012847 Sechium edule
SGA_v2.0_scaffold3G01677 Striga asiatica
SHI14661 Sapria himalayana
Solyc06g064610.1 Solanum lycopersicum
Solyc10g078570.1 Solanum lycopersicum
Solyc11g042440.1 Solanum lycopersicum
Sopen06g023090 Solanum pennellii
Sopen11g018520 Solanum pennellii
Sp1g41045 Schrenkiella parvula
Sp3g11710 Schrenkiella parvula
Sp7g24280 Schrenkiella parvula
TAR623G1005 Trochodendron aralioides
THA.LOC104810322 Tarenaya hassleriana
THA.LOC104811721 Tarenaya hassleriana
Thhalv10011858m.g Eutrema salsugineum
Thhalv10015369m.g Eutrema salsugineum
Thhalv10022151m.g Eutrema salsugineum
Thhalv10027319m.g Eutrema salsugineum
TWI34G1879 Tripterygium wilfordii
TWI60G1175 Tripterygium wilfordii
unitig_0.g1150 Utricularia gibba
vmacro20990 Vaccinium macrocarpon

User provided reference genes

Program Settings