Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02020 Brassica napus
A05p04000 Brassica napus
A09p52080 Brassica napus
Aa31LG10G14050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis
Actinidia11437 Actinidia chinensis
Actinidia18408 Actinidia chinensis
Actinidia28972 Actinidia chinensis
Ah.07g202990 Amaranthus hybridus
Ah.13g073340 Amaranthus hybridus
AL4G42670 Arabidopsis lyrata
AL5G41850 Arabidopsis lyrata
Aqoxy2G04165 Aquilegia oxysepala
Aqoxy604s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea
AT2G43795 Arabidopsis thaliana
AT3G59800 Arabidopsis thaliana
ATR0743G176 Amborella trichopoda
Atru.chr4.1513 Acer truncatum
AUR62002422 Chenopodium quinoa
AUR62023766 Chenopodium quinoa
BcaB02g07199 Brassica carinata
BcaB02g07200 Brassica carinata
BcaB02g08209 Brassica carinata
BcaB02g08224 Brassica carinata
BcaB02g08900 Brassica carinata
BcaB05g25106 Brassica carinata
BcaB05g25107 Brassica carinata
BcaB05g25109 Brassica carinata
BcaB05g25110 Brassica carinata
BcaB05g25112 Brassica carinata
BcaB05g25113 Brassica carinata
BcaB05g25117 Brassica carinata
BcaB05g25118 Brassica carinata
BcaC02g10087 Brassica carinata
BcaC02g12362 Brassica carinata
BcaC07g40452 Brassica carinata
BcaC07g40454 Brassica carinata
BcaC07g40508 Brassica carinata
BcaNung06582 Brassica carinata
BolC4t22105H Brassica oleracea
BolC4t24854H Brassica oleracea
BolC8t51078H Brassica oleracea
BraA04t15927Z Brassica rapa
BraA05t19388Z Brassica rapa
BraA09t40640Z Brassica rapa
C04p04750 Brassica napus
C04p32910 Brassica napus
C08p34760 Brassica napus
CAN.G448.4 Capsicum annuum
CANSAT56G2001 Cannabis sativa
CARHR138980 Cardamine hirsuta
CARHR170140 Cardamine hirsuta
Carub.0004s2633 Capsella rubella
Carub.0005s2652 Capsella rubella
Ca_18622_v3 Cicer arietinum L.
Ca_18628_v3 Cicer arietinum L.
CBR_g6538 Chara braunii
Cc03_g14990 Coffea canephora
CDE08G0022 Ceratophyllum demersum
Cfa021469 Carpinus fangiana
Ciclev10022332m.g Citrus clementina
CiPaw.01G198800 Carya illinoinensis
CiPaw.02G123300 Carya illinoinensis
ClCG08G000030 Citrullus lanatus
COL.COLO4_04655 Corchorus olitorius
Cpa.g.c34531 Carica papaya
Cre16.g660850 Chlamydomonas reinhardtii
CsaV3_5G040580 Cucumis sativus L.
CSS0000211 Camellia sinensis var. sinensis
CSS0004184 Camellia sinensis var. sinensis
CSS0028329 Camellia sinensis var. sinensis
CSS0046112 Camellia sinensis var. sinensis
Dinv18309 Davidia involucrata
Dinv33225 Davidia involucrata
Duzib212G0438 Durio zibethinus
Duzib268G1863 Durio zibethinus
ECA130G0002 Erigeron canadensis
ECA233G3286 Erigeron canadensis
EL10Ac3g06119 Beta vulgaris
Eucgr.G01598 Eucalyptus grandis
Eucgr.L00027 Eucalyptus grandis
FAN23G0024 Fragaria x ananassa
FAN26G1335 Fragaria x ananassa
FAN28G1052 Fragaria x ananassa
FvH4_1g00470 Fragaria vesca
Glyma.02G138900 Glycine max
Glyma.07G206100 Glycine max
Gohir.A10G146200 Gossypium hirsutum
Gohir.D10G120800 Gossypium hirsutum
Gorai.011G132700 Gossypium raimondii
GSVIVG01038193001 Vitis vinifera
HanXRQChr02g0059071 Helianthus annuus
Haze_11173 Corylus avellana
Haze_11178 Corylus avellana
HPP92_023727 Vanilla planifolia
Hund12374 Selenicereus undatus
Lalb_Chr05g0218801 Lupinus albus
Lalb_Chr16g0384341 Lupinus albus
Lalb_Chr23g0275001 Lupinus albus
Lj4g0014155 Lotus japonicus
Lj6C255T9 Lonicera japonica
Lj6C265T11 Lonicera japonica
Lju470A13G17 Lonicera japonica
Lju470A13T20 Lonicera japonica
Lju470A13T22 Lonicera japonica
Lsat_1_v5_gn_7_67880 Lactuca sativa
Manes.01G017500 Manihot esculenta
Mapoly0055s0100 Marchantia polymorpha
MBI07_g36705_MAGBIO Magnolia biondii
MCO01G557 Micromonas commoda
MD02G1003900 Malus domestica
MD15G1147200 Malus domestica
Medtr4g087630 Medicago truncatula
MELO3C022231.2 Cucumis melo
Migut.G00833 Erythranthe guttata
Migut.N03052 Erythranthe guttata
MSTRG.24561 Avicennia marina
Nitab4.5_0000064g0030 Nicotiana tabacum
Nitab4.5_0005089g0010 Nicotiana tabacum
Nn7g37517 Nelumbo nucifera
Oeu050314.3 Olea europaea
Os04g0496600 Oryza sativa ssp. japonica
Peaxi162Scf00483g00111 Petunia axillaris
PGR042G3815 Punica granatum
PGSC0003DMG400005367 Solanum tuberosum
Phvul.003G059400 Phaseolus vulgaris
Potri.007G139900 Populus trichocarpa
Potri.017G010100 Populus trichocarpa
Pp3c10_15670 Physcomitrium patens
Pp3c3_18840 Physcomitrium patens
Prupe.7G267400 Prunus persica
Psat7g119160 Pisum sativum
PSO017G4173 Papaver somniferum
PSO675G2278 Papaver somniferum
QL10p058544 Quercus lobata
QL10p058548 Quercus lobata
QL10p059325 Quercus lobata
QL10p059329 Quercus lobata
RcHm_v2.0_Chr2g0084981 Rosa chinensis
Rhsim02G0086100 Rhododendron simsii
RhsimUnG0015600 Rhododendron simsii
Sabra07G0113200 Salix brachista
Sabra07G0117600 Salix brachista
Sabra17G0009400 Salix brachista
SalBow3G2571 Salvia bowleyana
SalBow6G7192 Salvia bowleyana
Sc13g0007290 Simmondsia chinensis
Sed0002263 Sechium edule
Sed0017538 Sechium edule
SEGI_19170 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14924 Striga asiatica
SMO364G0381 Selaginella moellendorffii
Solyc12g019470.2 Solanum lycopersicum
Sopen12g009750 Solanum pennellii
Sp4g25870 Schrenkiella parvula
Sp5g03340 Schrenkiella parvula
TAR362G1052 Trochodendron aralioides
TAR636G2398 Trochodendron aralioides
THA.LOC104802336 Tarenaya hassleriana
THA.LOC104804159 Tarenaya hassleriana
THA.LOC104805841 Tarenaya hassleriana
Thecc.04G162100 Theobroma cacao
Thhalv10006256m.g Eutrema salsugineum
TPR.G23549 Trifolium pratense
TWI38G2196 Tripterygium wilfordii
TWI63G0908 Tripterygium wilfordii
unitig_8.g3637 Utricularia gibba
vmacro15701 Vaccinium macrocarpon
VMungo0251G3663 Vigna mungo
Zm00001eb425720 Zea mays

User provided reference genes

Program Settings