Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25500 Brassica napus
A08p10380 Brassica napus
A09p34530 Brassica napus
Aa31LG2G14240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2271 Anthoceros agrestis
Actinidia01260 Actinidia chinensis
Actinidia14738 Actinidia chinensis
Actinidia32778 Actinidia chinensis
Ah.12g056050 Amaranthus hybridus
AL1G45890 Arabidopsis lyrata
Aqoxy4G01989 Aquilegia oxysepala
Aqoxy4G02079 Aquilegia oxysepala
Aqoxy7G01323 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DIJ3RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5SRIL Arachis hypogaea
AT1G31812 Arabidopsis thaliana
ATR0598G056 Amborella trichopoda
ATR0829G178 Amborella trichopoda
Atru.chr6.2108 Acer truncatum
Atru.chr7.1674 Acer truncatum
AUR62007416 Chenopodium quinoa
AUR62027316 Chenopodium quinoa
BcaB03g13788 Brassica carinata
BcaB07g32828 Brassica carinata
BcaC05g27197 Brassica carinata
BcaC05g27958 Brassica carinata
BcaC07g37723 Brassica carinata
BolC5t31827H Brassica oleracea
BolC5t32704H Brassica oleracea
BolC5t32707H Brassica oleracea
BolC5t32777H Brassica oleracea
BolC8t48106H Brassica oleracea
BraA05t21434Z Brassica rapa
BraA08t33038Z Brassica rapa
BraA09t38994Z Brassica rapa
C05p31030 Brassica napus
C05p39640 Brassica napus
C05p40370 Brassica napus
CAN.G800.12 Capsicum annuum
CANSAT21G0569 Cannabis sativa
CARHR031130 Cardamine hirsuta
Carub.0001s3012 Capsella rubella
Ca_25095_v3 Cicer arietinum L.
Ca_30395_v3 Cicer arietinum L.
CBR_g18879 Chara braunii
Cc00_g07460 Coffea canephora
CDE02G3877 Ceratophyllum demersum
CDE11G1231 Ceratophyllum demersum
Ciclev10002973m.g Citrus clementina
CiPaw.11G103700 Carya illinoinensis
CiPaw.12G072200 Carya illinoinensis
ClCG10G000940 Citrullus lanatus
COL.COLO4_18121 Corchorus olitorius
COL.COLO4_37232 Corchorus olitorius
Cpa.g.c33773 Carica papaya
Cre02.g118850 Chlamydomonas reinhardtii
CsaV3_3G001010 Cucumis sativus L.
CSS0007814 Camellia sinensis var. sinensis
CSS0012724 Camellia sinensis var. sinensis
CSS0014160 Camellia sinensis var. sinensis
CSS0035325 Camellia sinensis var. sinensis
DCAR_006311 Daucus carota
DCAR_030897 Daucus carota
Dinv25573 Davidia involucrata
Dinv37412 Davidia involucrata
Dinv41817 Davidia involucrata
Duzib106G0486 Durio zibethinus
Duzib150G0272 Durio zibethinus
ECA246G1091 Erigeron canadensis
EL10Ac5g11913 Beta vulgaris
Eucgr.C00828 Eucalyptus grandis
Eucgr.E01218 Eucalyptus grandis
FAN04G1172 Fragaria x ananassa
FAN13G0805 Fragaria x ananassa
FAN18G1566 Fragaria x ananassa
FAN18G3743 Fragaria x ananassa
FAN19G1377 Fragaria x ananassa
FAN23G0613 Fragaria x ananassa
FAN28G0738 Fragaria x ananassa
FvH4_1g08340 Fragaria vesca
FvH4_5g24090 Fragaria vesca
Glyma.04G122900 Glycine max
Glyma.09G214500 Glycine max
Gohir.A07G014450 Gossypium hirsutum
Gohir.A11G304300 Gossypium hirsutum
Gohir.A11G304400 Gossypium hirsutum
Gohir.D07G014100 Gossypium hirsutum
Gohir.D11G319700 Gossypium hirsutum
Gohir.D11G319800 Gossypium hirsutum
Gorai.001G014900 Gossypium raimondii
Gorai.007G349800 Gossypium raimondii
Gorai.007G349900 Gossypium raimondii
GSVIVG01015105001 Vitis vinifera
GSVIVG01022804001 Vitis vinifera
HanXRQChr17g0537111 Helianthus annuus
Haze_08042 Corylus avellana
Haze_08052 Corylus avellana
Haze_27157 Corylus avellana
Haze_27764 Corylus avellana
Hma1.2p1_1873F.1_g306170 Hydrangea macrophylla
Hund11098 Selenicereus undatus
Lalb_Chr05g0215391 Lupinus albus
Lalb_Chr16g0380701 Lupinus albus
Lj2g0015830 Lotus japonicus
Lsat_1_v5_gn_3_23340 Lactuca sativa
Manes.15G182400 Manihot esculenta
Manes.17G006800 Manihot esculenta
Mapoly0146s0043 Marchantia polymorpha
MBI04_g27275_MAGBIO Magnolia biondii
MCO11G819 Micromonas commoda
MD00G1002100 Malus domestica
MD02G1087600 Malus domestica
MD06G1017000 Malus domestica
MD15G1215200 Malus domestica
Medtr5g026740 Medicago truncatula
MELO3C031937.2 Cucumis melo
Migut.E01354 Erythranthe guttata
MSTRG.11879 Avicennia marina
Nitab4.5_0000030g0220 Nicotiana tabacum
Nitab4.5_0001023g0180 Nicotiana tabacum
Nn1g02053 Nelumbo nucifera
Nn3g19256 Nelumbo nucifera
Oeu046800.1 Olea europaea
Os03g0576600 Oryza sativa ssp. japonica
Os06g0115300 Oryza sativa ssp. japonica
Os08g0162800 Oryza sativa ssp. japonica
Peaxi162Scf00193g00214 Petunia axillaris
PGR031G3679 Punica granatum
PGR042G1275 Punica granatum
PGR067G0004 Punica granatum
PGSC0003DMG400030867 Solanum tuberosum
Phvul.002G127700 Phaseolus vulgaris
Potri.001G130200 Populus trichocarpa
Potri.003G103700 Populus trichocarpa
Pp3c14_11470 Physcomitrium patens
Pp3c2_5450 Physcomitrium patens
PRCOL_00007032 Prasinoderma coloniale
Prupe.5G019500 Prunus persica
Prupe.7G202100 Prunus persica
Psat2g143680 Pisum sativum
PSO063G4979 Papaver somniferum
PSO782G2341 Papaver somniferum
QL12p001893 Quercus lobata
RcHm_v2.0_Chr7g0213621 Rosa chinensis
Rhsim11G0034000 Rhododendron simsii
Rhsim11G0034100 Rhododendron simsii
Sabra01G0100700 Salix brachista
Sabra03G0070800 Salix brachista
SalBow8G1427 Salvia bowleyana
Sc01g0007080 Simmondsia chinensis
Sed0010064 Sechium edule
SEGI_06410 Sequoiadendron giganteum
SMO340G0182 Selaginella moellendorffii
Solyc08g075690.3 Solanum lycopersicum
Sopen08g024340 Solanum pennellii
Sp1g27510 Schrenkiella parvula
TAR374G0121 Trochodendron aralioides
TAR375G1053 Trochodendron aralioides
TAR636G0177 Trochodendron aralioides
THA.LOC104798518 Tarenaya hassleriana
THA.LOC104814400 Tarenaya hassleriana
Thecc.03G325000 Theobroma cacao
Thecc.09G080000 Theobroma cacao
Thhalv10009206m.g Eutrema salsugineum
TPR.G17251 Trifolium pratense
TWI12G1099 Tripterygium wilfordii
TWI36G0806 Tripterygium wilfordii
unitig_32.g11633 Utricularia gibba
vmacro00053 Vaccinium macrocarpon
Zm00001eb378890 Zea mays
Zm00001eb415460 Zea mays

User provided reference genes

Program Settings