Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34920 Brassica napus
A05p29290 Brassica napus
Aa31LG8G6600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3305 Anthoceros agrestis
Actinidia04325 Actinidia chinensis
Ah.01g001650 Amaranthus hybridus
Ah.01g012960 Amaranthus hybridus
AL1G57850 Arabidopsis lyrata
AL3G33340 Arabidopsis lyrata
Aqoxy3G04279 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H8RGTW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIL69C Arachis hypogaea
AT1G50260 Arabidopsis thaliana
AT3G19830 Arabidopsis thaliana
ATR0618G227 Amborella trichopoda
Atru.chr11.1230 Acer truncatum
Atru.chr11.1318 Acer truncatum
AUR62015200 Chenopodium quinoa
AUR62017663 Chenopodium quinoa
BcaB06g26052 Brassica carinata
BcaC05g28401 Brassica carinata
BolC1t04396H Brassica oleracea
BolC1t04398H Brassica oleracea
BolC5t33206H Brassica oleracea
BraA01t03575Z Brassica rapa
BraA05t21812Z Brassica rapa
C01p44320 Brassica napus
C01p44330 Brassica napus
C05p44800 Brassica napus
CAN.G194.12 Capsicum annuum
CANSAT64G2478 Cannabis sativa
CARHR040320 Cardamine hirsuta
CARHR095340 Cardamine hirsuta
CARHR095350 Cardamine hirsuta
Carub.0001s3937 Capsella rubella
Carub.0003s1971 Capsella rubella
Ca_03034_v3 Cicer arietinum L.
CBR_g19924 Chara braunii
CBR_g8785 Chara braunii
Cc11_g05060 Coffea canephora
CDE04G0459 Ceratophyllum demersum
CDE05G0311 Ceratophyllum demersum
CDE05G3231 Ceratophyllum demersum
Ciclev10030903m.g Citrus clementina
CiPaw.05G166800 Carya illinoinensis
CiPaw.06G057400 Carya illinoinensis
ClCG11G013250 Citrullus lanatus
COL.COLO4_27668 Corchorus olitorius
Cpa.g.sc63.4 Carica papaya
Cpa.g.sc63.5 Carica papaya
Cre02.g074900 Chlamydomonas reinhardtii
CsaV3_5G029760 Cucumis sativus L.
DCAR_002561 Daucus carota
DCAR_016993 Daucus carota
DCAR_023435 Daucus carota
DCAR_023438 Daucus carota
DCAR_025336 Daucus carota
DCAR_026918 Daucus carota
Dinv12053 Davidia involucrata
Dinv19144 Davidia involucrata
Duzib248G1331 Durio zibethinus
Duzib251G0497 Durio zibethinus
Duzib268G0017 Durio zibethinus
ECA233G0693 Erigeron canadensis
ECA246G4798 Erigeron canadensis
EL10Ac9g22919 Beta vulgaris
Eucgr.J00849 Eucalyptus grandis
FAN07G0638 Fragaria x ananassa
FAN12G0359 Fragaria x ananassa
FAN17G2102 Fragaria x ananassa
FvH4_4g36720 Fragaria vesca
Glyma.11G103300 Glycine max
Glyma.12G028200 Glycine max
Gohir.A12G155800 Gossypium hirsutum
Gohir.A13G026200 Gossypium hirsutum
Gohir.D12G158900 Gossypium hirsutum
Gohir.D13G024800 Gossypium hirsutum
Gorai.008G172000 Gossypium raimondii
Gorai.013G028000 Gossypium raimondii
GSVIVG01010208001 Vitis vinifera
HanXRQChr06g0175531 Helianthus annuus
HanXRQChr13g0392741 Helianthus annuus
HPP92_002495 Vanilla planifolia
HPP92_002511 Vanilla planifolia
HPP92_002539 Vanilla planifolia
HPP92_002540 Vanilla planifolia
Lalb_Chr01g0001521 Lupinus albus
Lalb_Chr03g0024871 Lupinus albus
Lalb_Chr19g0139321 Lupinus albus
Lalb_Chr19g0139331 Lupinus albus
Lj3C852T13 Lonicera japonica
Lj3g0016150 Lotus japonicus
Lsat_1_v5_gn_0_9261 Lactuca sativa
Lsat_1_v5_gn_8_33460 Lactuca sativa
Manes.03G081000 Manihot esculenta
Manes.15G115000 Manihot esculenta
Mapoly0004s0137 Marchantia polymorpha
Mapoly0095s0004 Marchantia polymorpha
MBI03_g24011_MAGBIO Magnolia biondii
MBI03_g33917_MAGBIO Magnolia biondii
MBI06_g04642_MAGBIO Magnolia biondii
MBI06_g04644_MAGBIO Magnolia biondii
MBI06_g28846_MAGBIO Magnolia biondii
MBI06_g36500_MAGBIO Magnolia biondii
MD13G1007800 Malus domestica
MD16G1000300 Malus domestica
Medtr4g074370 Medicago truncatula
Medtr4g108040 Medicago truncatula
MELO3C011818.2 Cucumis melo
Migut.E00709 Erythranthe guttata
MSTRG.2047 Avicennia marina
MSTRG.2049 Avicennia marina
Nitab4.5_0000129g0330 Nicotiana tabacum
Nitab4.5_0010895g0010 Nicotiana tabacum
Nn1g09459 Nelumbo nucifera
Nn4g24922 Nelumbo nucifera
Oeu013188.2 Olea europaea
Oeu063830.2 Olea europaea
Os02g0829200 Oryza sativa ssp. japonica
Peaxi162Scf00329g00816 Petunia axillaris
PGR044G1594 Punica granatum
PGSC0003DMG400031377 Solanum tuberosum
Phvul.011G031600 Phaseolus vulgaris
Potri.008G085000 Populus trichocarpa
Potri.010G170300 Populus trichocarpa
Pp3c16_7780 Physcomitrium patens
Pp3c25_6480 Physcomitrium patens
Pp3c2_31020 Physcomitrium patens
PRCOL_00003667 Prasinoderma coloniale
Prupe.1G345200 Prunus persica
Psat5g177280 Pisum sativum
Psat5g177320 Pisum sativum
Psat5g177440 Pisum sativum
Psat5g190320 Pisum sativum
Psat5g190480 Pisum sativum
Psat5g190560 Pisum sativum
Psat5g195600 Pisum sativum
Psat5g195680 Pisum sativum
Psat5g195720 Pisum sativum
Psat5g195800 Pisum sativum
Psat5g195840 Pisum sativum
Psat5g196000 Pisum sativum
PSO017G6615 Papaver somniferum
QL03p043536 Quercus lobata
RcHm_v2.0_Chr4g0446431 Rosa chinensis
Rhsim09G0078200 Rhododendron simsii
Sabra08G0063100 Salix brachista
Sabra10G0130000 Salix brachista
SalBow2G1340 Salvia bowleyana
Sc06g0007840 Simmondsia chinensis
Sed0014097 Sechium edule
SEGI_01347 Sequoiadendron giganteum
SEGI_10176 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31802 Striga asiatica
SMO358G0042 Selaginella moellendorffii
Solyc04g008620.3 Solanum lycopersicum
Sopen04g003780 Solanum pennellii
Sp1g37110 Schrenkiella parvula
Sp3g17840 Schrenkiella parvula
TAR289G0001 Trochodendron aralioides
TAR629G3493 Trochodendron aralioides
Thecc.02G311300 Theobroma cacao
Thhalv10020191m.g Eutrema salsugineum
TPR.G21557 Trifolium pratense
TWI53G0870 Tripterygium wilfordii
TWI74G0501 Tripterygium wilfordii
unitig_22.g6366 Utricularia gibba
unitig_26.g10582 Utricularia gibba
vmacro10792 Vaccinium macrocarpon
VMungo1127G0270 Vigna mungo
Zm00001eb190700 Zea mays

User provided reference genes

Program Settings