Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12450 Brassica napus
A03p52630 Brassica napus
A08p15270 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.2832 Anthoceros agrestis
Actinidia07223 Actinidia chinensis
Actinidia35453 Actinidia chinensis
Ah.07g202810 Amaranthus hybridus
AL7G33020 Arabidopsis lyrata
Aqoxy3G03824 Aquilegia oxysepala
Aqoxy4G01986 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0MYZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A24RK9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBK94M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M99YM4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S740RW Arachis hypogaea
AT4G21105 Arabidopsis thaliana
ATR1136G081 Amborella trichopoda
Atru.chr3.3354 Acer truncatum
AUR62003964 Chenopodium quinoa
AUR62025834 Chenopodium quinoa
AUR62029880 Chenopodium quinoa
BcaB02g06868 Brassica carinata
BcaC01g00712 Brassica carinata
BcaC01g00715 Brassica carinata
BcaC07g41056 Brassica carinata
BcaC09g51261 Brassica carinata
BcaNung06968 Brassica carinata
BolC1t01452H Brassica oleracea
BolC3t20632H Brassica oleracea
BolC7t45607H Brassica oleracea
BraA01t01191Z Brassica rapa
BraA03t14337Z Brassica rapa
BraA08t33505Z Brassica rapa
C01p15030 Brassica napus
C03p83510 Brassica napus
C07p51070 Brassica napus
C08p30760 Brassica napus
CAN.G644.16 Capsicum annuum
CAN.G919.11 Capsicum annuum
CANSAT54G1468 Cannabis sativa
CARHR227690 Cardamine hirsuta
Carub.0007s2032 Capsella rubella
Ca_01671_v3 Cicer arietinum L.
Cc01_g09610 Coffea canephora
CDE02G2464 Ceratophyllum demersum
CDE04G1551 Ceratophyllum demersum
Ciclev10029753m.g Citrus clementina
CiPaw.14G102800 Carya illinoinensis
ClCG02G021980 Citrullus lanatus
ClCG02G021990 Citrullus lanatus
CsaV3_6G014810 Cucumis sativus L.
CSS0041849 Camellia sinensis var. sinensis
CSS0047176 Camellia sinensis var. sinensis
DCAR_010375 Daucus carota
DCAR_012178 Daucus carota
Dinv29439 Davidia involucrata
Duzib150G0214 Durio zibethinus
Duzib170G0121 Durio zibethinus
ECA233G1451 Erigeron canadensis
ECA238G2243 Erigeron canadensis
ECA248G1359 Erigeron canadensis
EL10Ac9g23026 Beta vulgaris
Eucgr.B03883 Eucalyptus grandis
Eucgr.J00455 Eucalyptus grandis
FAN16G2018 Fragaria x ananassa
FAN21G0712 Fragaria x ananassa
FAN25G0231 Fragaria x ananassa
FvH4_3g29830 Fragaria vesca
Glyma.11G187900 Glycine max
Glyma.12G086600 Glycine max
Glyma.12G182500 Glycine max
Glyma.13G318450 Glycine max
Gohir.A03G116500 Gossypium hirsutum
Gohir.A05G083000 Gossypium hirsutum
Gohir.A08G004000 Gossypium hirsutum
Gohir.A08G004100 Gossypium hirsutum
Gohir.D05G086000 Gossypium hirsutum
Gohir.D08G014300 Gossypium hirsutum
Gohir.D08G014400 Gossypium hirsutum
Gorai.004G008700 Gossypium raimondii
Gorai.004G008800 Gossypium raimondii
Gorai.009G087600 Gossypium raimondii
GSVIVG01031376001 Vitis vinifera
HanXRQChr01g0019701 Helianthus annuus
HanXRQChr04g0094651 Helianthus annuus
HanXRQChr14g0451651 Helianthus annuus
Haze_23434 Corylus avellana
Hma1.2p1_0695F.1_g204510 Hydrangea macrophylla
HPP92_018131 Vanilla planifolia
Hund13926 Selenicereus undatus
Lalb_Chr03g0027971 Lupinus albus
Lalb_Chr19g0136701 Lupinus albus
Lalb_Chr24g0395191 Lupinus albus
Lj3g0005404 Lotus japonicus
Lj3g0019761 Lotus japonicus
Lsat_1_v5_gn_1_62101 Lactuca sativa
Lsat_1_v5_gn_2_95660 Lactuca sativa
Lsat_1_v5_gn_6_39460 Lactuca sativa
Manes.04G007100 Manihot esculenta
Manes.11G159200 Manihot esculenta
Mapoly0085s0067 Marchantia polymorpha
MBI14_g32122_MAGBIO Magnolia biondii
MD03G1137200 Malus domestica
MD03G1165300 Malus domestica
MD11G1159300 Malus domestica
Medtr2g085045 Medicago truncatula
Medtr4g053330 Medicago truncatula
Medtr4g101930 Medicago truncatula
MELO3C021443.2 Cucumis melo
MELO3C021444.2 Cucumis melo
Migut.D02341 Erythranthe guttata
Migut.N02508 Erythranthe guttata
MSTRG.12360 Avicennia marina
Nitab4.5_0003082g0050 Nicotiana tabacum
Nitab4.5_0004070g0040 Nicotiana tabacum
Nitab4.5_0006735g0040 Nicotiana tabacum
Nitab4.5_0009196g0030 Nicotiana tabacum
Nn2g11232 Nelumbo nucifera
Nn2g13476 Nelumbo nucifera
Nn2g13477 Nelumbo nucifera
Oeu035542.1 Olea europaea
Oeu050197.1 Olea europaea
Os02g0162000 Oryza sativa ssp. japonica
Os05g0457000 Oryza sativa ssp. japonica
Os07g0647500 Oryza sativa ssp. japonica
Peaxi162Scf00114g00210 Petunia axillaris
Peaxi162Scf01284g00022 Petunia axillaris
PGR102G0539 Punica granatum
PGR119G0779 Punica granatum
PGSC0003DMG400007147 Solanum tuberosum
PGSC0003DMG400026528 Solanum tuberosum
Phvul.005G126200 Phaseolus vulgaris
Phvul.011G091700 Phaseolus vulgaris
Potri.001G460200 Populus trichocarpa
Potri.011G156400 Populus trichocarpa
Pp3c19_5160 Physcomitrium patens
Prupe.6G122400 Prunus persica
Psat4g069800 Pisum sativum
Psat5g255840 Pisum sativum
PSO384G1920 Papaver somniferum
PSO384G3267 Papaver somniferum
QL01p013387 Quercus lobata
RcHm_v2.0_Chr5g0055141 Rosa chinensis
Rhsim10G0039800 Rhododendron simsii
Sabra16G0311900 Salix brachista
SalBow3G0427 Salvia bowleyana
Sc10g0010310 Simmondsia chinensis
Sed0008155 Sechium edule
Sed0026235 Sechium edule
SEGI_11030 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26418 Striga asiatica
Sopen03g017380 Solanum pennellii
Sopen06g030950 Solanum pennellii
Sopen11g026730 Solanum pennellii
Sp7g19190 Schrenkiella parvula
TAR636G2319 Trochodendron aralioides
THA.LOC104800546 Tarenaya hassleriana
THA.LOC109117263 Tarenaya hassleriana
Thecc.09G289400 Theobroma cacao
Thhalv10026571m.g Eutrema salsugineum
TPR.G23418 Trifolium pratense
TPR.G28100 Trifolium pratense
TPR.G37632 Trifolium pratense
TWI12G1250 Tripterygium wilfordii
unitig_22.g6645 Utricularia gibba
unitig_8.g3289 Utricularia gibba
vmacro03291 Vaccinium macrocarpon
vmacro14365 Vaccinium macrocarpon
Zm00001eb110520 Zea mays
Zm00001eb329410 Zea mays
Zm00001eb351210 Zea mays

User provided reference genes

Program Settings