Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31350 Brassica napus
A09p08750 Brassica napus
Aa31LG1G17330 Aethionema arabicum
Actinidia06637 Actinidia chinensis
Actinidia35959 Actinidia chinensis
AL8G42030 Arabidopsis lyrata
Aqoxy5G02176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FMR9EU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PRK495 Arachis hypogaea
AT5G64620 Arabidopsis thaliana
Atru.chr4.844 Acer truncatum
Atru.chr6.1289 Acer truncatum
Atru.chr6.1291 Acer truncatum
AUR62022459 Chenopodium quinoa
AUR62040065 Chenopodium quinoa
BcaB02g09804 Brassica carinata
BcaB04g19979 Brassica carinata
BcaC01g02692 Brassica carinata
BcaC01g02693 Brassica carinata
BcaC04g23305 Brassica carinata
BolC3t18417H Brassica oleracea
BolC3t18418H Brassica oleracea
BolC9t53899H Brassica oleracea
BraA06t26077Z Brassica rapa
BraA09t36524Z Brassica rapa
C03p61570 Brassica napus
C03p61580 Brassica napus
C09p09900 Brassica napus
CAN.G1163.3 Capsicum annuum
CANSAT01G1731 Cannabis sativa
CANSAT01G2965 Cannabis sativa
CARHR278590 Cardamine hirsuta
CARHR287460 Cardamine hirsuta
Carub.0008s2541 Capsella rubella
Ca_16933_v3 Cicer arietinum L.
Cc05_g08030 Coffea canephora
Cc07_g18140 Coffea canephora
CDE06G1377 Ceratophyllum demersum
CDE08G0148 Ceratophyllum demersum
Cfa002816 Carpinus fangiana
Ciclev10002604m.g Citrus clementina
CiPaw.03G129200 Carya illinoinensis
CiPaw.04G086900 Carya illinoinensis
ClCG01G015470 Citrullus lanatus
COL.COLO4_35683 Corchorus olitorius
Cpa.g.sc42.138 Carica papaya
CsaV3_6G041710 Cucumis sativus L.
DCAR_001364 Daucus carota
DCAR_028534 Daucus carota
Dinv06063 Davidia involucrata
Duzib147G1472 Durio zibethinus
EL10Ac1g01806 Beta vulgaris
FAN15G1947 Fragaria x ananassa
FAN16G3582 Fragaria x ananassa
FAN19G1994 Fragaria x ananassa
FAN26G3157 Fragaria x ananassa
FAN28G2384 Fragaria x ananassa
FvH4_1g24160 Fragaria vesca
FvH4_2g14700 Fragaria vesca
Glyma.04G214000 Glycine max
Glyma.06G152400 Glycine max
Gohir.A10G084907 Gossypium hirsutum
Gohir.A11G230200 Gossypium hirsutum
Gohir.D10G106500 Gossypium hirsutum
Gohir.D11G230300 Gossypium hirsutum
Gorai.003G067200 Gossypium raimondii
Gorai.011G116700 Gossypium raimondii
HanXRQChr08g0218241 Helianthus annuus
HanXRQChr12g0368871 Helianthus annuus
Haze_25111 Corylus avellana
Hma1.2p1_0528F.1_g173060 Hydrangea macrophylla
HPP92_012690 Vanilla planifolia
HPP92_012697 Vanilla planifolia
HPP92_026320 Vanilla planifolia
Lalb_Chr00c34g0408621 Lupinus albus
Lalb_Chr08g0238441 Lupinus albus
Lalb_Chr12g0203181 Lupinus albus
Lj1g0003494 Lotus japonicus
Lsat_1_v5_gn_8_17501 Lactuca sativa
Manes.03G045700 Manihot esculenta
Manes.10G035200 Manihot esculenta
Manes.10G035400 Manihot esculenta
Manes.10G035700 Manihot esculenta
MBI04_g11519_MAGBIO Magnolia biondii
MBI13_g00568_MAGBIO Magnolia biondii
MBI18_g04554_MAGBIO Magnolia biondii
MBI18_g25089_MAGBIO Magnolia biondii
MBI19_g08236_MAGBIO Magnolia biondii
MBI19_g29440_MAGBIO Magnolia biondii
MD01G1038300 Malus domestica
MD15G1314600 Malus domestica
Medtr3g095980 Medicago truncatula
MELO3C008049.2 Cucumis melo
Migut.H00735 Erythranthe guttata
Migut.L00890 Erythranthe guttata
MSTRG.23446 Avicennia marina
Nitab4.5_0000805g0060 Nicotiana tabacum
Nitab4.5_0001270g0060 Nicotiana tabacum
Nitab4.5_0001270g0070 Nicotiana tabacum
Nitab4.5_0004364g0010 Nicotiana tabacum
Nitab4.5_0011816g0010 Nicotiana tabacum
Nn5g28620 Nelumbo nucifera
Oeu004248.1 Olea europaea
Oeu047690.1 Olea europaea
Os08g0108100 Oryza sativa ssp. japonica
Os12g0283400 Oryza sativa ssp. japonica
Peaxi162Scf00589g00001 Petunia axillaris
PGSC0003DMG400028678 Solanum tuberosum
PGSC0003DMG400037039 Solanum tuberosum
PGSC0003DMG400037656 Solanum tuberosum
PGSC0003DMG400040471 Solanum tuberosum
PGSC0003DMG400044426 Solanum tuberosum
Phvul.009G149400 Phaseolus vulgaris
Potri.006G134900 Populus trichocarpa
Potri.007G108301 Populus trichocarpa
Potri.010G209800 Populus trichocarpa
Prupe.6G197400 Prunus persica
Psat0s10365g0080 Pisum sativum
Psat5g060000 Pisum sativum
PSO017G1826 Papaver somniferum
PSO017G2443 Papaver somniferum
PSO017G4136 Papaver somniferum
PSO017G6365 Papaver somniferum
PSO063G6208 Papaver somniferum
PSO339G0814 Papaver somniferum
PSO339G1590 Papaver somniferum
PSO339G2774 Papaver somniferum
PSO384G1499 Papaver somniferum
PSO724G0052 Papaver somniferum
PSO724G0234 Papaver somniferum
PSO782G3380 Papaver somniferum
PSO832G2548 Papaver somniferum
PSO837G0029 Papaver somniferum
PSO837G0030 Papaver somniferum
PSO837G0066 Papaver somniferum
QL06p029175 Quercus lobata
RcHm_v2.0_Chr2g0120401 Rosa chinensis
RhsimUnG0017500 Rhododendron simsii
RhsimUnG0133000 Rhododendron simsii
Sabra10G0162100 Salix brachista
Sc01g0006950 Simmondsia chinensis
Sed0011375 Sechium edule
Sed0024266 Sechium edule
SGA_v2.0_scaffold355G49762 Striga asiatica
Solyc11g005820.1 Solanum lycopersicum
Sopen11g001780 Solanum pennellii
Sp2g27680 Schrenkiella parvula
TAR626G0056 Trochodendron aralioides
TAR626G0884 Trochodendron aralioides
TAR627G1097 Trochodendron aralioides
TAR628G0877 Trochodendron aralioides
TAR628G1510 Trochodendron aralioides
TAR633G1609 Trochodendron aralioides
TAR636G0184 Trochodendron aralioides
TAR636G1702 Trochodendron aralioides
TAR636G1790 Trochodendron aralioides
TAR636G2547 Trochodendron aralioides
TAR636G3366 Trochodendron aralioides
THA.LOC104799518 Tarenaya hassleriana
THA.LOC104819318 Tarenaya hassleriana
Thecc.01G128300 Theobroma cacao
Thhalv10005004m.g Eutrema salsugineum
TPR.G34657 Trifolium pratense
TWI75G0604 Tripterygium wilfordii
TWI75G0632 Tripterygium wilfordii
VMungo0251G1253 Vigna mungo
VMungo1309G2376 Vigna mungo
Zm00001eb083160 Zea mays
Zm00001eb174300 Zea mays
Zm00001eb260280 Zea mays
Zm00001eb260290 Zea mays

User provided reference genes

Program Settings