Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15710 Brassica napus
Aa31LG7G4180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis
Actinidia22531 Actinidia chinensis
Actinidia29817 Actinidia chinensis
Actinidia30825 Actinidia chinensis
Actinidia38001 Actinidia chinensis
AL1G32280 Arabidopsis lyrata
Aqoxy3G01077 Aquilegia oxysepala
Aqoxy3G01079 Aquilegia oxysepala
Aqoxy5G01593 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea
AT1G19530 Arabidopsis thaliana
ATR0568G230 Amborella trichopoda
Atru.chr13.446 Acer truncatum
AUR62003937 Chenopodium quinoa
AUR62014477 Chenopodium quinoa
AUR62014478 Chenopodium quinoa
BcaB07g31980 Brassica carinata
BcaC05g25839 Brassica carinata
BolC5t30510H Brassica oleracea
BraA06t24680Z Brassica rapa
C05p18030 Brassica napus
CANSAT25G0460 Cannabis sativa
CANSAT25G1850 Cannabis sativa
CARHR020100 Cardamine hirsuta
Carub.0001s1910 Capsella rubella
Ca_13362_v3 Cicer arietinum L.
Ca_15505_v3 Cicer arietinum L.
Cc10_g02670 Coffea canephora
CDE02G0765 Ceratophyllum demersum
CDE05G3574 Ceratophyllum demersum
CDE06G1682 Ceratophyllum demersum
CDE11G1036 Ceratophyllum demersum
Cfa018174 Carpinus fangiana
Ciclev10002766m.g Citrus clementina
CiPaw.15G080700 Carya illinoinensis
ClCG05G018840 Citrullus lanatus
ClCG08G014950 Citrullus lanatus
COL.COLO4_26289 Corchorus olitorius
Cpa.g.sc31.39 Carica papaya
CsaV3_2G028830 Cucumis sativus L.
CsaV3_3G045320 Cucumis sativus L.
CSS0033768 Camellia sinensis var. sinensis
CSS0043508 Camellia sinensis var. sinensis
CSS0044578 Camellia sinensis var. sinensis
DCAR_020978 Daucus carota
Dinv36099 Davidia involucrata
Duzib093G0346 Durio zibethinus
Duzib116G0345 Durio zibethinus
ECA232G2533 Erigeron canadensis
ECA246G2053 Erigeron canadensis
EL10Ac1g00610 Beta vulgaris
Eucgr.F01582 Eucalyptus grandis
Eucgr.F01583 Eucalyptus grandis
FAN15G0289 Fragaria x ananassa
FAN20G2373 Fragaria x ananassa
FAN27G1128 Fragaria x ananassa
FvH4_2g39630 Fragaria vesca
Glyma.04G030900 Glycine max
Glyma.06G031000 Glycine max
Glyma.06G031100 Glycine max
Glyma.14G073200 Glycine max
Glyma.17G251800 Glycine max
Glyma.18G124300 Glycine max
Gohir.A01G114900 Gossypium hirsutum
Gohir.A05G192800 Gossypium hirsutum
Gohir.A05G258800 Gossypium hirsutum
Gohir.D01G103300 Gossypium hirsutum
Gohir.D05G196000 Gossypium hirsutum
Gohir.D05G260600 Gossypium hirsutum
Gorai.002G127100 Gossypium raimondii
Gorai.009G200900 Gossypium raimondii
Gorai.009G272400 Gossypium raimondii
GSVIVG01009730001 Vitis vinifera
HanXRQChr02g0051071 Helianthus annuus
HanXRQChr05g0156841 Helianthus annuus
HanXRQChr16g0501561 Helianthus annuus
Haze_17929 Corylus avellana
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla
Hma1.2p1_0203F.1_g086240 Hydrangea macrophylla
HPP92_003110 Vanilla planifolia
HPP92_010562 Vanilla planifolia
Hund26890 Selenicereus undatus
Hund29908 Selenicereus undatus
Lalb_Chr08g0245901 Lupinus albus
Lalb_Chr14g0369381 Lupinus albus
Lj1g0012803 Lotus japonicus
Lj5g0010725 Lotus japonicus
Lsat_1_v5_gn_4_117601 Lactuca sativa
Lsat_1_v5_gn_5_27881 Lactuca sativa
Manes.18G023000 Manihot esculenta
Mapoly0037s0069 Marchantia polymorpha
Mapoly0085s0006 Marchantia polymorpha
Mapoly0085s0007 Marchantia polymorpha
Mapoly0087s0044 Marchantia polymorpha
Mapoly0087s0045 Marchantia polymorpha
Mapoly0152s0035 Marchantia polymorpha
Mapoly0203s0009 Marchantia polymorpha
Mapoly0212s0007 Marchantia polymorpha
Mapoly0212s0008 Marchantia polymorpha
Mapoly0212s0009 Marchantia polymorpha
MBI10_g18267_MAGBIO Magnolia biondii
MBI18_g38882_MAGBIO Magnolia biondii
MD08G1029700 Malus domestica
Medtr1g022395 Medicago truncatula
Medtr3g111970 Medicago truncatula
MELO3C003817.2 Cucumis melo
MELO3C010952.2 Cucumis melo
Migut.N00486 Erythranthe guttata
MSTRG.22304 Avicennia marina
MSTRG.24284 Avicennia marina
Nitab4.5_0001759g0080 Nicotiana tabacum
Nitab4.5_0002224g0100 Nicotiana tabacum
Nitab4.5_0004768g0030 Nicotiana tabacum
Nn2g14293 Nelumbo nucifera
Oeu007023.1 Olea europaea
Os03g0826800 Oryza sativa ssp. japonica
Peaxi162Scf00020g01711 Petunia axillaris
Peaxi162Scf00303g00058 Petunia axillaris
PGR083G0993 Punica granatum
PGSC0003DMG400003688 Solanum tuberosum
PGSC0003DMG400005376 Solanum tuberosum
Phvul.001G013200 Phaseolus vulgaris
Phvul.009G058800 Phaseolus vulgaris
Phvul.009G058900 Phaseolus vulgaris
Potri.002G034500 Populus trichocarpa
Potri.005G228600 Populus trichocarpa
Pp3c16_7660 Physcomitrium patens
Pp3c20_22930 Physcomitrium patens
Prupe.1G377400 Prunus persica
Prupe.2G019400 Prunus persica
Psat5g012160 Pisum sativum
Psat6g008240 Pisum sativum
PSO541G2330 Papaver somniferum
PSO675G8146 Papaver somniferum
QL02p009008 Quercus lobata
RcHm_v2.0_Chr6g0301271 Rosa chinensis
Rhsim06G0031200 Rhododendron simsii
Rhsim06G0031400 Rhododendron simsii
Rhsim06G0031500 Rhododendron simsii
Rhsim07G0240700 Rhododendron simsii
RhsimUnG0051600 Rhododendron simsii
Sabra02G0027700 Salix brachista
Sabra05G0176500 Salix brachista
Sc02g0005700 Simmondsia chinensis
Sc15g0007040 Simmondsia chinensis
Sc26g0003380 Simmondsia chinensis
Sed0010517 Sechium edule
Sed0024175 Sechium edule
SEGI_02312 Sequoiadendron giganteum
SEGI_15325 Sequoiadendron giganteum
SEGI_30411 Sequoiadendron giganteum
SGA_v2.0_scaffold326G48731 Striga asiatica
SMO348G0043 Selaginella moellendorffii
Solyc04g080540.2 Solanum lycopersicum
Sopen04g034130 Solanum pennellii
Sp1g17400 Schrenkiella parvula
TAR381G0780 Trochodendron aralioides
THA.LOC104811375 Tarenaya hassleriana
Thecc.08G029500 Theobroma cacao
Thhalv10009139m.g Eutrema salsugineum
TPR.G12369 Trifolium pratense
TPR.G20143 Trifolium pratense
TWI56G1092 Tripterygium wilfordii
unitig_747.g21673 Utricularia gibba
unitig_899.g15617 Utricularia gibba
VMungo0647G0771 Vigna mungo
VMungo1309G0255 Vigna mungo

User provided reference genes

Program Settings