Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20860 Brassica napus
A08p19160 Brassica napus
A09p56640 Brassica napus
Aa31LG2G19880 Aethionema arabicum
Aa31LG7G12810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis
Actinidia14131 Actinidia chinensis
Actinidia23107 Actinidia chinensis
Actinidia38669 Actinidia chinensis
Ah.10g025490 Amaranthus hybridus
AL4G14070 Arabidopsis lyrata
AL7G21520 Arabidopsis lyrata
Aqoxy7G02301 Aquilegia oxysepala
Aqoxy7G02464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea
AT2G24020 Arabidopsis thaliana
AT4G30620 Arabidopsis thaliana
ATR0580G427 Amborella trichopoda
Atru.chr7.22 Acer truncatum
AUR62024802 Chenopodium quinoa
AUR62032418 Chenopodium quinoa
BcaB01g01386 Brassica carinata
BcaB03g12652 Brassica carinata
BcaB05g25007 Brassica carinata
BcaC01g01145 Brassica carinata
BcaC03g15698 Brassica carinata
BcaC07g40965 Brassica carinata
BolC2t09418H Brassica oleracea
BolC3t21168H Brassica oleracea
BolC8t51532H Brassica oleracea
BraA02t07117Z Brassica rapa
BraA08t33877Z Brassica rapa
BraA09t41055Z Brassica rapa
C02p32810 Brassica napus
C03p88620 Brassica napus
C08p39590 Brassica napus
CAN.G353.7 Capsicum annuum
CAN.G551.46 Capsicum annuum
CANSAT11G1220 Cannabis sativa
CANSAT54G0776 Cannabis sativa
CARHR184720 Cardamine hirsuta
CARHR238490 Cardamine hirsuta
CARHR238500 Cardamine hirsuta
Carub.0004s0318 Capsella rubella
Carub.0007s0995 Capsella rubella
Ca_21133_v3 Cicer arietinum L.
CBR_g54183 Chara braunii
CBR_g728 Chara braunii
Cc06_g14830 Coffea canephora
CDE02G1701 Ceratophyllum demersum
CDE05G2988 Ceratophyllum demersum
Cfa013048 Carpinus fangiana
Ciclev10009489m.g Citrus clementina
CiPaw.15G167000 Carya illinoinensis
ClCG06G012460 Citrullus lanatus
COL.COLO4_18821 Corchorus olitorius
Cpa.g.sc46.167 Carica papaya
Cre10.g458550 Chlamydomonas reinhardtii
CsaV3_1G029020 Cucumis sativus L.
CSS0032495 Camellia sinensis var. sinensis
Dinv08178 Davidia involucrata
Dinv08223 Davidia involucrata
Duzib150G0841 Durio zibethinus
Duzib168G0532 Durio zibethinus
ECA240G3283 Erigeron canadensis
EL10Ac2g02497 Beta vulgaris
Eucgr.C02498 Eucalyptus grandis
Eucgr.C02535 Eucalyptus grandis
FAN15G2986 Fragaria x ananassa
FAN20G0773 Fragaria x ananassa
FAN27G3303 Fragaria x ananassa
FvH4_2g41160 Fragaria vesca
Glyma.06G225800 Glycine max
Glyma.12G156200 Glycine max
Gohir.A05G053000 Gossypium hirsutum
Gohir.A07G027300 Gossypium hirsutum
Gohir.D05G054601 Gossypium hirsutum
Gohir.D07G031300 Gossypium hirsutum
Gorai.001G032700 Gossypium raimondii
Gorai.009G056300 Gossypium raimondii
GSVIVG01023623001 Vitis vinifera
HanXRQChr03g0065371 Helianthus annuus
HanXRQChr09g0244601 Helianthus annuus
Haze_19171 Corylus avellana
Haze_21409 Corylus avellana
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla
HPP92_004701 Vanilla planifolia
Hund02987 Selenicereus undatus
Hund25620 Selenicereus undatus
Lalb_Chr07g0179881 Lupinus albus
Lalb_Chr12g0198731 Lupinus albus
Lalb_Chr12g0198741 Lupinus albus
Lalb_Chr13g0300831 Lupinus albus
Lj4g0010746 Lotus japonicus
Lj6g0027633 Lotus japonicus
Lsat_1_v5_gn_7_47460 Lactuca sativa
Lsat_1_v5_gn_7_50001 Lactuca sativa
Manes.03G008200 Manihot esculenta
Manes.14G144700 Manihot esculenta
Mapoly0031s0030 Marchantia polymorpha
MBI14_g09102_MAGBIO Magnolia biondii
MBI15_g18237_MAGBIO Magnolia biondii
MD08G1056000 Malus domestica
MD15G1041000 Malus domestica
Medtr0380s0040 Medicago truncatula
Medtr4g130730 Medicago truncatula
MELO3C010214.2 Cucumis melo
Migut.E01458 Erythranthe guttata
Migut.K00317 Erythranthe guttata
MSTRG.1632 Avicennia marina
Nitab4.5_0002011g0110 Nicotiana tabacum
Nitab4.5_0002891g0090 Nicotiana tabacum
Nitab4.5_0003563g0010 Nicotiana tabacum
Nitab4.5_0008875g0050 Nicotiana tabacum
Nn8g39925 Nelumbo nucifera
Oeu006863.1 Olea europaea
Oeu048547.1 Olea europaea
Os02g0180200 Oryza sativa ssp. japonica
Peaxi162Scf00045g02039 Petunia axillaris
Peaxi162Scf00062g00225 Petunia axillaris
Peaxi162Scf00387g00211 Petunia axillaris
PGR102G1248 Punica granatum
PGSC0003DMG400007906 Solanum tuberosum
PGSC0003DMG400026299 Solanum tuberosum
Phvul.005G005700 Phaseolus vulgaris
Potri.018G105600 Populus trichocarpa
Pp3c11_2360 Physcomitrium patens
Pp3c1_1160 Physcomitrium patens
Pp3c2_35530 Physcomitrium patens
PRCOL_00004350 Prasinoderma coloniale
Prupe.1G394300 Prunus persica
Prupe.7G264300 Prunus persica
Psat1g022480 Pisum sativum
Psat4g009640 Pisum sativum
PSO339G2511 Papaver somniferum
PSO384G4038 Papaver somniferum
QL02p018811 Quercus lobata
QL02p093501 Quercus lobata
RcHm_v2.0_Chr6g0299371 Rosa chinensis
Rhsim07G0165600 Rhododendron simsii
Sabra18G0090100 Salix brachista
SalBow1G1642 Salvia bowleyana
Sc09g0010670 Simmondsia chinensis
Sed0000106 Sechium edule
SEGI_18679 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02174 Striga asiatica
SMO364G0386 Selaginella moellendorffii
Solyc08g006780.3 Solanum lycopersicum
Solyc12g009980.2 Solanum lycopersicum
Sopen08g002730 Solanum pennellii
Sopen12g004850 Solanum pennellii
Sp4g02930 Schrenkiella parvula
Sp7g28490 Schrenkiella parvula
TAR383G0918 Trochodendron aralioides
TAR626G0743 Trochodendron aralioides
THA.LOC104803919 Tarenaya hassleriana
THA.LOC104819993 Tarenaya hassleriana
Thecc.09G028700 Theobroma cacao
Thhalv10000343m.g Eutrema salsugineum
Thhalv10026346m.g Eutrema salsugineum
TPR.G24849 Trifolium pratense
TPR.G3593 Trifolium pratense
TWI32G0932 Tripterygium wilfordii
TWI34G1622 Tripterygium wilfordii
TWI63G0696 Tripterygium wilfordii
unitig_749.g13818 Utricularia gibba
vmacro05152 Vaccinium macrocarpon
vmacro06074 Vaccinium macrocarpon
VMungo1080G0447 Vigna mungo
Zm00001eb206700 Zea mays
Zm00001eb234060 Zea mays

User provided reference genes

Program Settings