Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24750 Brassica napus
A08p10530 Brassica napus
A09p34710 Brassica napus
A09p34730 Brassica napus
Aa31LG2G14460 Aethionema arabicum
Aa31LG9G15840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4088 Anthoceros agrestis
Actinidia29382 Actinidia chinensis
Ah.07g205660 Amaranthus hybridus
AL1G49570 Arabidopsis lyrata
Aqoxy2G00645 Aquilegia oxysepala
Aqoxy2G02197 Aquilegia oxysepala
Aqoxy6G00101 Aquilegia oxysepala
Aqoxy6G01398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea
AT1G31480 Arabidopsis thaliana
ATR1089G044 Amborella trichopoda
Atru.chr13.2487 Acer truncatum
Atru.chr13.2489 Acer truncatum
Atru.chr13.2501 Acer truncatum
AUR62022357 Chenopodium quinoa
AUR62034351 Chenopodium quinoa
BcaB04g18153 Brassica carinata
BcaB04g18154 Brassica carinata
BcaB07g32808 Brassica carinata
BcaC05g27051 Brassica carinata
BcaC05g27176 Brassica carinata
BcaC07g37755 Brassica carinata
BolC2t10203H Brassica oleracea
BolC2t10210H Brassica oleracea
BolC5t31805H Brassica oleracea
BolC8t48140H Brassica oleracea
BraA08t33053Z Brassica rapa
BraA09t39007Z Brassica rapa
C05p30730 Brassica napus
CAN.G282.41 Capsicum annuum
CANSAT21G1017 Cannabis sativa
CANSAT78G1092 Cannabis sativa
CARHR287040 Cardamine hirsuta
Carub.0001s2990 Capsella rubella
Ca_19680_v3 Cicer arietinum L.
CBR_g19663 Chara braunii
CBR_g36451 Chara braunii
CBR_g46403 Chara braunii
Cc10_g08720 Coffea canephora
CDE02G0702 Ceratophyllum demersum
CDE02G4445 Ceratophyllum demersum
CDE08G1083 Ceratophyllum demersum
Cfa008084 Carpinus fangiana
Ciclev10018750m.g Citrus clementina
CiPaw.03G015400 Carya illinoinensis
ClCG11G008940 Citrullus lanatus
COL.COLO4_06914 Corchorus olitorius
COL.COLO4_06915 Corchorus olitorius
Cpa.g.sc24.79 Carica papaya
Cpa.g.sc24.82 Carica papaya
Cpa.g.sc24.85 Carica papaya
CsaV3_2G033160 Cucumis sativus L.
CSS0023016 Camellia sinensis var. sinensis
CSS0032109 Camellia sinensis var. sinensis
DCAR_019079 Daucus carota
Dinv05108 Davidia involucrata
Dinv15064 Davidia involucrata
Dinv36168 Davidia involucrata
Duzib177G1024 Durio zibethinus
ECA234G0584 Erigeron canadensis
ECA240G3381 Erigeron canadensis
EL10Ac1g01668 Beta vulgaris
Eucgr.F02954 Eucalyptus grandis
FAN15G3699 Fragaria x ananassa
FAN20G0554 Fragaria x ananassa
FAN27G2707 Fragaria x ananassa
FvH4_2g35070 Fragaria vesca
Glyma.09G234500 Glycine max
Gohir.A02G087700 Gossypium hirsutum
Gohir.A05G253700 Gossypium hirsutum
Gohir.D02G102700 Gossypium hirsutum
Gohir.D05G255640 Gossypium hirsutum
Gohir.D05G255660 Gossypium hirsutum
Gorai.005G116600 Gossypium raimondii
Gorai.009G267200 Gossypium raimondii
GSVIVG01036377001 Vitis vinifera
HanXRQChr03g0062111 Helianthus annuus
Haze_13953 Corylus avellana
HPP92_008552 Vanilla planifolia
HPP92_008553 Vanilla planifolia
HPP92_008596 Vanilla planifolia
Hund26650 Selenicereus undatus
Lalb_Chr16g0391261 Lupinus albus
Lj2A387G43 Lonicera japonica
Lj2A387T50 Lonicera japonica
Lj3g0009901 Lotus japonicus
Lj9A698G58 Lonicera japonica
Lsat_1_v5_gn_5_153621 Lactuca sativa
Lsat_1_v5_gn_5_98501 Lactuca sativa
Lsat_1_v5_gn_7_42860 Lactuca sativa
Manes.02G221381 Manihot esculenta
Manes.18G117901 Manihot esculenta
Mapoly0151s0040 Marchantia polymorpha
MD08G1108000 Malus domestica
MD15G1088500 Malus domestica
Medtr1g105770 Medicago truncatula
Medtr4g033490 Medicago truncatula
Medtr5g080490 Medicago truncatula
MELO3C008088.2 Cucumis melo
Migut.D00784 Erythranthe guttata
Migut.N00698 Erythranthe guttata
Migut.N00699 Erythranthe guttata
MSTRG.12725 Avicennia marina
Nitab4.5_0000069g0130 Nicotiana tabacum
Nitab4.5_0009427g0010 Nicotiana tabacum
Nn5g27278 Nelumbo nucifera
Oeu006618.1 Olea europaea
Oeu028926.1 Olea europaea
Os07g0406600 Oryza sativa ssp. japonica
Os08g0110700 Oryza sativa ssp. japonica
Peaxi162Scf00021g02415 Petunia axillaris
PGR042G3616 Punica granatum
Phvul.011G002700 Phaseolus vulgaris
Potri.013G099700 Populus trichocarpa
Potri.019G072300 Populus trichocarpa
Pp3c3_10160 Physcomitrium patens
Pp3c3_10170 Physcomitrium patens
Prupe.1G442600 Prunus persica
Psat7g146680 Pisum sativum
PSO017G1167 Papaver somniferum
PSO017G3151 Papaver somniferum
PSO017G5679 Papaver somniferum
PSO170G4509 Papaver somniferum
PSO170G4791 Papaver somniferum
QL09p002038 Quercus lobata
QL93p1879_0034 Quercus lobata
RcHm_v2.0_Chr6g0306901 Rosa chinensis
Rhsim08G0115100 Rhododendron simsii
Rhsim08G0116000 Rhododendron simsii
Sabra13G0085500 Salix brachista
Sabra19G0083800 Salix brachista
SalBow2G0849 Salvia bowleyana
Sc26g0002190 Simmondsia chinensis
Sed0018643 Sechium edule
SEGI_18218 Sequoiadendron giganteum
SEGI_28351 Sequoiadendron giganteum
SEGI_38945 Sequoiadendron giganteum
SGA_v2.0_scaffold120G33012 Striga asiatica
SGA_v2.0_scaffold158G37476 Striga asiatica
SHI03798 Sapria himalayana
SMO200G0043 Selaginella moellendorffii
SMO200G0098 Selaginella moellendorffii
SMO200G0135 Selaginella moellendorffii
SMO209G0008 Selaginella moellendorffii
Solyc01g008320.3 Solanum lycopersicum
Sopen01g003840 Solanum pennellii
Sp1g27280 Schrenkiella parvula
TAR383G0434 Trochodendron aralioides
TAR625G0099 Trochodendron aralioides
THA.LOC104812717 Tarenaya hassleriana
Thecc.08G177600 Theobroma cacao
Thhalv10006721m.g Eutrema salsugineum
TPR.G31924 Trifolium pratense
TWI12G0255 Tripterygium wilfordii
TWI18G0503 Tripterygium wilfordii
unitig_8.g3682 Utricularia gibba
vmacro14428 Vaccinium macrocarpon
vmacro14429 Vaccinium macrocarpon
vmacro14430 Vaccinium macrocarpon
vmacro17836 Vaccinium macrocarpon
vmacro17837 Vaccinium macrocarpon
VMungo0251G0072 Vigna mungo
VMungo1127G2207 Vigna mungo
Zm00001eb174090 Zea mays
Zm00001eb260480 Zea mays

User provided reference genes

Program Settings