Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02760 Brassica napus
A03p63990 Brassica napus
A07p03170 Brassica napus
A09p11580 Brassica napus
Aa31LG6G12890 Aethionema arabicum
Actinidia03180 Actinidia chinensis
Actinidia15439 Actinidia chinensis
Actinidia17001 Actinidia chinensis
Ah.00g000350 Amaranthus hybridus
AL3G50810 Arabidopsis lyrata
AL7G15100 Arabidopsis lyrata
Aqoxy5G01820 Aquilegia oxysepala
Aqoxy6G02168 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea
AT2G17787 Arabidopsis thaliana
AT4G35940 Arabidopsis thaliana
Atru.chr13.253 Acer truncatum
Atru.chr3.863_Atru.chr3.864 Acer truncatum
AUR62040566 Chenopodium quinoa
AUR62041467 Chenopodium quinoa
BcaB07g31703 Brassica carinata
BcaC04g22942 Brassica carinata
BcaC06g36322 Brassica carinata
BcaNung00778 Brassica carinata
BcaNung05051 Brassica carinata
BolC1t00292H Brassica oleracea
BolC7t40940H Brassica oleracea
BolC7t46570H Brassica oleracea
BolC9t54253H Brassica oleracea
BraA01t00262Z Brassica rapa
BraA03t15466Z Brassica rapa
BraA07t28113Z Brassica rapa
BraA09t36805Z Brassica rapa
C01p03060 Brassica napus
C07p05400 Brassica napus
C07p61450 Brassica napus
C09p13630 Brassica napus
CAN.G1517.6 Capsicum annuum
CAN.G311.49 Capsicum annuum
CANSAT11G2253 Cannabis sativa
CANSAT25G2395 Cannabis sativa
CARHR108180 Cardamine hirsuta
CARHR244340 Cardamine hirsuta
Carub.0003s3193 Capsella rubella
Carub.0007s0428 Capsella rubella
Cc10_g01420 Coffea canephora
Cfa005239 Carpinus fangiana
Cfa007004 Carpinus fangiana
Cfa013982 Carpinus fangiana
Ciclev10002009m.g Citrus clementina
Ciclev10025767m.g Citrus clementina
CiPaw.07G146700 Carya illinoinensis
CiPaw.08G067700 Carya illinoinensis
ClCG08G014140 Citrullus lanatus
COL.COLO4_22466 Corchorus olitorius
COL.COLO4_26117 Corchorus olitorius
Cpa.g.sc26.299 Carica papaya
Cpa.g.sc26.300 Carica papaya
CsaV3_2G024280 Cucumis sativus L.
CSS0006390 Camellia sinensis var. sinensis
CSS0032179 Camellia sinensis var. sinensis
CSS0036757 Camellia sinensis var. sinensis
DCAR_009498 Daucus carota
Dinv31870 Davidia involucrata
Dinv39538 Davidia involucrata
Duzib041G0318 Durio zibethinus
Duzib093G1456 Durio zibethinus
Duzib147G0922 Durio zibethinus
Duzib187G0006 Durio zibethinus
Duzib264G0091 Durio zibethinus
ECA233G2314 Erigeron canadensis
EL10Ac3g06641 Beta vulgaris
Eucgr.I02328 Eucalyptus grandis
FAN15G2156 Fragaria x ananassa
FAN20G0678 Fragaria x ananassa
FAN27G1813 Fragaria x ananassa
FvH4_2g38160 Fragaria vesca
Gohir.A01G110100 Gossypium hirsutum
Gohir.A02G172400 Gossypium hirsutum
Gohir.A05G185000 Gossypium hirsutum
Gohir.D01G096700 Gossypium hirsutum
Gohir.D03G007700 Gossypium hirsutum
Gohir.D05G187800 Gossypium hirsutum
Gohir.D12G193466 Gossypium hirsutum
Gorai.002G122400 Gossypium raimondii
Gorai.003G007900 Gossypium raimondii
Gorai.008G131100 Gossypium raimondii
Gorai.008G208400 Gossypium raimondii
Gorai.009G193100 Gossypium raimondii
GSVIVG01009951001 Vitis vinifera
GSVIVG01018727001 Vitis vinifera
GSVIVG01024025001 Vitis vinifera
HanXRQChr12g0366821 Helianthus annuus
HanXRQChr13g0387151 Helianthus annuus
Haze_03728 Corylus avellana
Haze_22667 Corylus avellana
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla
HPP92_007327 Vanilla planifolia
Hund01666 Selenicereus undatus
Lalb_Chr08g0246191 Lupinus albus
Lj1g0024400 Lotus japonicus
Lj4A21T58 Lonicera japonica
Lj4A799T84 Lonicera japonica
Lj5g0025072 Lotus japonicus
Lsat_1_v5_gn_8_29800 Lactuca sativa
Manes.18G010907 Manihot esculenta
MBI05_g23379_MAGBIO Magnolia biondii
MD02G1126500 Malus domestica
MD15G1242000 Malus domestica
MELO3C011353.2 Cucumis melo
Migut.C00862 Erythranthe guttata
Migut.N03174 Erythranthe guttata
Migut.O00908 Erythranthe guttata
MSTRG.1174 Avicennia marina
MSTRG.22345 Avicennia marina
MSTRG.25264 Avicennia marina
Nitab4.5_0001944g0070 Nicotiana tabacum
Nitab4.5_0006505g0050 Nicotiana tabacum
Nn5g30782 Nelumbo nucifera
Nn6g31993 Nelumbo nucifera
Oeu007365.1 Olea europaea
Oeu026642.1 Olea europaea
Oeu061977.1 Olea europaea
Peaxi162Scf00045g02255 Petunia axillaris
Peaxi162Scf00064g00737 Petunia axillaris
Peaxi162Scf00860g00422 Petunia axillaris
PGR031G2559 Punica granatum
PGR119G1825 Punica granatum
PGSC0003DMG400009946 Solanum tuberosum
PGSC0003DMG400029333 Solanum tuberosum
Potri.002G019200 Populus trichocarpa
Potri.005G242300 Populus trichocarpa
Potri.005G242400 Populus trichocarpa
Prupe.1G362500 Prunus persica
Prupe.1G362800 Prunus persica
Prupe.7G171900 Prunus persica
PSO170G2543 Papaver somniferum
PSO541G2818 Papaver somniferum
PSO675G0587 Papaver somniferum
PSO700G0117 Papaver somniferum
QL02p012206 Quercus lobata
QL11p050200 Quercus lobata
RcHm_v2.0_Chr6g0303321 Rosa chinensis
Sabra02G0015500 Salix brachista
Sabra05G0187500 Salix brachista
SalBow7G2790 Salvia bowleyana
Sc15g0004790 Simmondsia chinensis
Sed0007913 Sechium edule
Sed0017695 Sechium edule
SGA_v2.0_scaffold11G05941 Striga asiatica
SGA_v2.0_scaffold19G08554 Striga asiatica
Solyc04g081730.3 Solanum lycopersicum
Sopen04g035350 Solanum pennellii
Sp7g33720 Schrenkiella parvula
TAR376G0784 Trochodendron aralioides
TAR381G0731 Trochodendron aralioides
TAR625G0988 Trochodendron aralioides
TAR628G1526 Trochodendron aralioides
THA.LOC104804274 Tarenaya hassleriana
THA.LOC104807504 Tarenaya hassleriana
Thecc.08G047900 Theobroma cacao
Thhalv10022767m.g Eutrema salsugineum
Thhalv10027062m.g Eutrema salsugineum
TPR.G38526 Trifolium pratense
TWI12G1115 Tripterygium wilfordii
TWI34G0261 Tripterygium wilfordii
TWI36G1615 Tripterygium wilfordii
unitig_0.g2088 Utricularia gibba
unitig_26.g9885 Utricularia gibba
unitig_749.g13901 Utricularia gibba
vmacro07570 Vaccinium macrocarpon

User provided reference genes

Program Settings