Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38220 Brassica napus
A06p38290 Brassica napus
Aa31LG11G8330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis
Actinidia12113 Actinidia chinensis
Actinidia36545 Actinidia chinensis
Ah.15g091580 Amaranthus hybridus
Ah.15g091620 Amaranthus hybridus
Ah.15g091670 Amaranthus hybridus
AL253U10010 Arabidopsis lyrata
AL5G27650 Arabidopsis lyrata
AL8G23320 Arabidopsis lyrata
Aqoxy6G01048 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea
AT5G49530 Arabidopsis thaliana
ATR0064G058 Amborella trichopoda
ATR0594G097 Amborella trichopoda
Atru.chr3.545 Acer truncatum
AUR62008836 Chenopodium quinoa
AUR62025406 Chenopodium quinoa
BcaB07g34160 Brassica carinata
BcaC03g17736 Brassica carinata
BolC2t11821H Brassica oleracea
BolC7t44527H Brassica oleracea
BraA02t08801Z Brassica rapa
BraA06t26744Z Brassica rapa
C02p57460 Brassica napus
C07p39950 Brassica napus
CAN.G1058.29 Capsicum annuum
CAN.G358.119 Capsicum annuum
CANSAT01G2856 Cannabis sativa
CARHR050700 Cardamine hirsuta
CARHR050710 Cardamine hirsuta
CARHR287960 Cardamine hirsuta
Carub.0008s0941 Capsella rubella
Ca_00390_v3 Cicer arietinum L.
Ca_29955_v3 Cicer arietinum L.
Ca_29956_v3 Cicer arietinum L.
CBR_g22032 Chara braunii
CBR_g50911 Chara braunii
CBR_g50913 Chara braunii
Cc07_g09240 Coffea canephora
CDE02G1799 Ceratophyllum demersum
CDE05G1436 Ceratophyllum demersum
CDE05G2435 Ceratophyllum demersum
CDE10G0017 Ceratophyllum demersum
CDE10G0302 Ceratophyllum demersum
CDE10G1264 Ceratophyllum demersum
Ciclev10025048m.g Citrus clementina
CiPaw.02G015600 Carya illinoinensis
ClCG07G009030 Citrullus lanatus
COL.COLO4_00322 Corchorus olitorius
COL.COLO4_14865 Corchorus olitorius
COL.COLO4_17692 Corchorus olitorius
COL.COLO4_22111 Corchorus olitorius
COL.COLO4_28362 Corchorus olitorius
Cpa.g.sc353.1 Carica papaya
Cpa.g.sc353.3 Carica papaya
Cre10.g454650 Chlamydomonas reinhardtii
CsaV3_4G005180 Cucumis sativus L.
CSS0022456 Camellia sinensis var. sinensis
CSS0048181 Camellia sinensis var. sinensis
DCAR_023357 Daucus carota
DCAR_025930 Daucus carota
Dinv39963 Davidia involucrata
Duzib264G0994 Durio zibethinus
ECA232G4057 Erigeron canadensis
ECA238G3830 Erigeron canadensis
EL10Ac7g17738 Beta vulgaris
Eucgr.H01260 Eucalyptus grandis
FAN19G3131 Fragaria x ananassa
FAN23G2825 Fragaria x ananassa
FAN24G1278 Fragaria x ananassa
FAN26G0470 Fragaria x ananassa
FAN28G1508 Fragaria x ananassa
FvH4_1g13700 Fragaria vesca
FvH4_2g10200 Fragaria vesca
Glyma.11G009900 Glycine max
Gohir.A11G185700 Gossypium hirsutum
Gohir.A11G236200 Gossypium hirsutum
Gohir.D11G192200 Gossypium hirsutum
Gohir.D11G227900 Gossypium hirsutum
Gohir.D11G227980 Gossypium hirsutum
Gorai.007G205200 Gossypium raimondii
GSVIVG01018995001 Vitis vinifera
HanXRQChr07g0188711 Helianthus annuus
HanXRQChr09g0262111 Helianthus annuus
Haze_02099 Corylus avellana
Haze_02100 Corylus avellana
Haze_15116 Corylus avellana
Haze_15127 Corylus avellana
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla
HPP92_015986 Vanilla planifolia
HPP92_015988 Vanilla planifolia
HPP92_026150 Vanilla planifolia
HPP92_026151 Vanilla planifolia
Hund05506 Selenicereus undatus
Lalb_Chr20g0123501 Lupinus albus
Lj4A239T53 Lonicera japonica
Lj5A533G14 Lonicera japonica
Lj5g0019705 Lotus japonicus
Lsat_1_v5_gn_4_150860 Lactuca sativa
Lsat_1_v5_gn_4_150881 Lactuca sativa
Manes.07G068600 Manihot esculenta
Mapoly0113s0019 Marchantia polymorpha
MCO01G289 Micromonas commoda
MD02G1151400 Malus domestica
MD15G1266000 Malus domestica
Medtr5g019810 Medicago truncatula
Medtr5g026040 Medicago truncatula
MELO3C017544.2 Cucumis melo
MELO3C034917.2 Cucumis melo
Migut.H00181 Erythranthe guttata
MSTRG.23544 Avicennia marina
Nitab4.5_0001279g0090 Nicotiana tabacum
Nitab4.5_0004445g0020 Nicotiana tabacum
Nitab4.5_0008457g0010 Nicotiana tabacum
Nitab4.5_0010593g0010 Nicotiana tabacum
Nn5g29538 Nelumbo nucifera
Oeu014919.1 Olea europaea
Oeu053005.1 Olea europaea
Oeu053007.1 Olea europaea
Oeu053017.4 Olea europaea
Os08g0268900 Oryza sativa ssp. japonica
Peaxi162Scf00515g00225 Petunia axillaris
PGSC0003DMG400004762 Solanum tuberosum
PGSC0003DMG400012686 Solanum tuberosum
Phvul.002G040400 Phaseolus vulgaris
Potri.007G028600 Populus trichocarpa
Pp3c2_15450 Physcomitrium patens
PRCOL_00000416 Prasinoderma coloniale
Prupe.7G151600 Prunus persica
Psat2g160960 Pisum sativum
PSO017G0414 Papaver somniferum
PSO541G3560 Papaver somniferum
PSO675G7346 Papaver somniferum
QL06p009809 Quercus lobata
QL06p045466 Quercus lobata
RcHm_v2.0_Chr2g0102021 Rosa chinensis
Rhsim03G0093700 Rhododendron simsii
Sabra07G0024800 Salix brachista
Sc17g0002700 Simmondsia chinensis
Sc17g0002710 Simmondsia chinensis
Sed0023254 Sechium edule
SEGI_29880 Sequoiadendron giganteum
SEGI_33702 Sequoiadendron giganteum
SEGI_36884 Sequoiadendron giganteum
SEGI_38277 Sequoiadendron giganteum
SHI06749 Sapria himalayana
SHI06750 Sapria himalayana
SMO203G0104 Selaginella moellendorffii
Solyc02g085560.3 Solanum lycopersicum
Solyc08g078600.3 Solanum lycopersicum
Sopen02g030230 Solanum pennellii
Sopen08g027080 Solanum pennellii
Sp2g19840 Schrenkiella parvula
SpUn0021_0010 Schrenkiella parvula
TAR628G1622 Trochodendron aralioides
THA.LOC104819797 Tarenaya hassleriana
Thecc.01G039100 Theobroma cacao
Thhalv10003751m.g Eutrema salsugineum
Thhalv10023969m.g Eutrema salsugineum
TPR.G18816 Trifolium pratense
TPR.G28496 Trifolium pratense
TWI09G1017 Tripterygium wilfordii
unitig_52.g17585 Utricularia gibba
vmacro07910 Vaccinium macrocarpon
VMungo1215G0116 Vigna mungo
Zm00001eb176250 Zea mays
Zm00001eb269010 Zea mays
Zm00001eb269020 Zea mays

User provided reference genes

Program Settings