Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05580 Brassica napus
A03p09480 Brassica napus
A10p20270 Brassica napus
A10p25510 Brassica napus
Aa31LG3G14920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3727 Anthoceros agrestis
Actinidia06961 Actinidia chinensis
Actinidia16378 Actinidia chinensis
Actinidia16379 Actinidia chinensis
Ah.04g161980 Amaranthus hybridus
AL6G23110 Arabidopsis lyrata
AL6G30920 Arabidopsis lyrata
Aqoxy2G00377 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57BBZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6L2V6B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7NEFJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K0L3ZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QA9X4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3DJVQ Arachis hypogaea
AT5G12310 Arabidopsis thaliana
AT5G19430 Arabidopsis thaliana
ATR0680G173 Amborella trichopoda
Atru.chr3.2757 Acer truncatum
Atru.chr4.1902 Acer truncatum
AUR62000187 Chenopodium quinoa
BcaB01g04862 Brassica carinata
BcaB01g05145 Brassica carinata
BcaB01g05406 Brassica carinata
BcaNung06777 Brassica carinata
BolC3t13153H Brassica oleracea
BolC3t13575H Brassica oleracea
BolC9t59292H Brassica oleracea
BraA03t09895Z Brassica rapa
BraA03t10266Z Brassica rapa
BraA10t44098Z Brassica rapa
BraA10t44615Z Brassica rapa
C03p06530 Brassica napus
C03p11060 Brassica napus
C09p64590 Brassica napus
CANSAT54G0855 Cannabis sativa
CARHR193510 Cardamine hirsuta
CARHR193520 Cardamine hirsuta
CARHR200800 Cardamine hirsuta
Carub.0006s1082 Capsella rubella
Carub.0006s1777 Capsella rubella
Ca_03985_v3 Cicer arietinum L.
CBR_g131 Chara braunii
Cc00_g22040 Coffea canephora
Cc08_g06320 Coffea canephora
CDE11G0350 Ceratophyllum demersum
CDE11G0877 Ceratophyllum demersum
CDE11G0903 Ceratophyllum demersum
Cfa009849 Carpinus fangiana
Ciclev10016417m.g Citrus clementina
CiPaw.14G113600 Carya illinoinensis
ClCG02G022870 Citrullus lanatus
ClCG02G022880 Citrullus lanatus
COL.COLO4_35673 Corchorus olitorius
COL.COLO4_35674 Corchorus olitorius
Cre13.g604750 Chlamydomonas reinhardtii
CsaV3_6G039010 Cucumis sativus L.
CSS0027788 Camellia sinensis var. sinensis
CSS0029213 Camellia sinensis var. sinensis
CSS0038115 Camellia sinensis var. sinensis
CSS0040984 Camellia sinensis var. sinensis
Dinv05100 Davidia involucrata
Dinv36171 Davidia involucrata
Duzib150G1594 Durio zibethinus
Duzib168G1105 Durio zibethinus
ECA238G4029 Erigeron canadensis
EL10Ac4g10147 Beta vulgaris
EL10Ac8g18303 Beta vulgaris
EL10Ac8g18304 Beta vulgaris
Eucgr.B03731 Eucalyptus grandis
FAN16G3201 Fragaria x ananassa
FAN21G2250 Fragaria x ananassa
FAN25G0474 Fragaria x ananassa
FvH4_3g27900 Fragaria vesca
Glyma.07G230600 Glycine max
Glyma.20G037400 Glycine max
Gohir.A09G110200 Gossypium hirsutum
Gohir.A13G219100 Gossypium hirsutum
Gohir.D09G106500 Gossypium hirsutum
Gohir.D13G222800 Gossypium hirsutum
Gorai.006G124000 Gossypium raimondii
Gorai.013G253900 Gossypium raimondii
GSVIVG01037269001 Vitis vinifera
HanXRQChr06g0182501 Helianthus annuus
HanXRQChr14g0432231 Helianthus annuus
Haze_23225 Corylus avellana
Haze_23226 Corylus avellana
Hma1.2p1_0129F.1_g060160 Hydrangea macrophylla
HPP92_006725 Vanilla planifolia
Hund07438 Selenicereus undatus
Hund21983 Selenicereus undatus
Lalb_Chr10g0106291 Lupinus albus
Lj1A284G15 Lonicera japonica
Lj6g0014777 Lotus japonicus
Lsat_1_v5_gn_2_32240 Lactuca sativa
Manes.02G139800 Manihot esculenta
MBI13_g27798_MAGBIO Magnolia biondii
MBI14_g20318_MAGBIO Magnolia biondii
MBI19_g16738_MAGBIO Magnolia biondii
MBI19_g25614_MAGBIO Magnolia biondii
MD03G1166600 Malus domestica
MD03G1166700 Malus domestica
MD11G1185700 Malus domestica
MELO3C014562.2 Cucumis melo
Migut.D00657 Erythranthe guttata
Migut.N02373 Erythranthe guttata
MSTRG.17516 Avicennia marina
MSTRG.17633 Avicennia marina
MSTRG.21348 Avicennia marina
Nitab4.5_0000718g0220 Nicotiana tabacum
Nitab4.5_0012538g0010 Nicotiana tabacum
Nn7g36696 Nelumbo nucifera
Nn7g36697 Nelumbo nucifera
Oeu016695.1 Olea europaea
Oeu025904.1 Olea europaea
Oeu061709.1 Olea europaea
Os01g0954400 Oryza sativa ssp. japonica
Peaxi162Scf00004g04520 Petunia axillaris
Peaxi162Scf00032g02420 Petunia axillaris
PGR102G0788 Punica granatum
PGR119G1682 Punica granatum
PGR123G0005 Punica granatum
PGSC0003DMG400009461 Solanum tuberosum
PGSC0003DMG400022698 Solanum tuberosum
Phvul.006G030700 Phaseolus vulgaris
Phvul.006G030800 Phaseolus vulgaris
Potri.001G275900 Populus trichocarpa
Potri.009G070600 Populus trichocarpa
Pp3c26_14330 Physcomitrium patens
Pp3c4_28300 Physcomitrium patens
PRCOL_00000691 Prasinoderma coloniale
Prupe.4G267100 Prunus persica
Psat5g181240 Pisum sativum
PSO339G4433 Papaver somniferum
PSO384G1598 Papaver somniferum
QL01p017232 Quercus lobata
QL01p017234 Quercus lobata
RcHm_v2.0_Chr5g0050631 Rosa chinensis
Rhsim13G0210600 Rhododendron simsii
Sabra09G0053400 Salix brachista
Sabra16G0170200 Salix brachista
SalBow6G0813 Salvia bowleyana
Sc06g0004680 Simmondsia chinensis
Sed0017072 Sechium edule
Sed0020433 Sechium edule
SEGI_32483 Sequoiadendron giganteum
SEGI_38021 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12252 Striga asiatica
SGA_v2.0_scaffold310G48197 Striga asiatica
SHI55208 Sapria himalayana
SMO337G0017 Selaginella moellendorffii
Solyc01g008810.3 Solanum lycopersicum
Solyc11g064830.2 Solanum lycopersicum
Sopen01g004320 Solanum pennellii
Sopen11g024490 Solanum pennellii
Sp6g24980 Schrenkiella parvula
Sp6g31330 Schrenkiella parvula
TAR623G1229 Trochodendron aralioides
THA.LOC104824623 Tarenaya hassleriana
Thecc.09G249200 Theobroma cacao
Thhalv10014461m.g Eutrema salsugineum
Thhalv10014482m.g Eutrema salsugineum
TPR.G27271 Trifolium pratense
TWI75G0849 Tripterygium wilfordii
TWI79G0099 Tripterygium wilfordii
unitig_8.g3650 Utricularia gibba
VMungo0540G1882 Vigna mungo
Zm00001eb140640 Zea mays

User provided reference genes

Program Settings