Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17960 Brassica napus
A06p00710 Brassica napus
A07p38520 Brassica napus
Aa31LG10G1450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1526 Anthoceros agrestis
Actinidia24431 Actinidia chinensis
Actinidia24432 Actinidia chinensis
Ah.08g217320 Amaranthus hybridus
AL1G62590 Arabidopsis lyrata
AL2G32020 Arabidopsis lyrata
Aqoxy7G04172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E9FGF4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I2K3PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3RKN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4XL8W Arachis hypogaea
AT1G53880 Arabidopsis thaliana
AT1G53900 Arabidopsis thaliana
AT1G72340 Arabidopsis thaliana
ATR0099G064 Amborella trichopoda
Atru.chr1.4109 Acer truncatum
Atru.chr10.1447 Acer truncatum
Atru.chr4.1739 Acer truncatum
AUR62001413 Chenopodium quinoa
AUR62025622 Chenopodium quinoa
BcaB02g10878 Brassica carinata
BcaB03g14982 Brassica carinata
BcaB05g24748 Brassica carinata
BcaB07g33278 Brassica carinata
BcaB07g33281 Brassica carinata
BcaC03g15371 Brassica carinata
BcaC05g28883 Brassica carinata
BcaC08g43566 Brassica carinata
BcaC08g44141 Brassica carinata
BcaC08g46690 Brassica carinata
BolC2t09033H Brassica oleracea
BolC6t36036H Brassica oleracea
BolC6t36718H Brassica oleracea
BolC6t39715H Brassica oleracea
BraA02t06843Z Brassica rapa
BraA07t31412Z Brassica rapa
C02p29850 Brassica napus
C06p09640 Brassica napus
C06p46700 Brassica napus
CAN.G1073.7 Capsicum annuum
CANSAT56G1857 Cannabis sativa
CARHR044200 Cardamine hirsuta
CARHR065250 Cardamine hirsuta
Carub.0001s4316 Capsella rubella
Carub.0002s1920 Capsella rubella
Ca_23429_v3 Cicer arietinum L.
Cc04_g00780 Coffea canephora
CDE09G0018 Ceratophyllum demersum
CDE09G1267 Ceratophyllum demersum
Cfa003466 Carpinus fangiana
Cfa021746 Carpinus fangiana
Ciclev10025790m.g Citrus clementina
CiPaw.02G131500 Carya illinoinensis
ClCG09G001360 Citrullus lanatus
COL.COLO4_30858 Corchorus olitorius
Cpa.g.sc25.185 Carica papaya
Cre16.g687518 Chlamydomonas reinhardtii
CsaV3_7G033970 Cucumis sativus L.
CSS0029048 Camellia sinensis var. sinensis
DCAR_007657 Daucus carota
Dinv17514 Davidia involucrata
Dinv37823 Davidia involucrata
Duzib192G0957 Durio zibethinus
Duzib235G0388 Durio zibethinus
ECA247G2052 Erigeron canadensis
EL10Ac7g16485 Beta vulgaris
Eucgr.J02599 Eucalyptus grandis
FAN02G3159 Fragaria x ananassa
FAN05G3978 Fragaria x ananassa
FAN09G4052 Fragaria x ananassa
FAN14G5022 Fragaria x ananassa
FvH4_3g21362 Fragaria vesca
FvH4_6g35750 Fragaria vesca
Glyma.03G263500 Glycine max
Glyma.07G045300 Glycine max
Glyma.19G262500 Glycine max
Gohir.A05G141401 Gossypium hirsutum
Gohir.A06G194600 Gossypium hirsutum
Gohir.D05G143600 Gossypium hirsutum
Gohir.D06G202300 Gossypium hirsutum
Gorai.009G147500 Gossypium raimondii
Gorai.010G236200 Gossypium raimondii
Gorai.012G178400 Gossypium raimondii
GSVIVG01016675001 Vitis vinifera
Haze_16125 Corylus avellana
Hma1.2p1_0229F.1_g097040 Hydrangea macrophylla
HPP92_011050 Vanilla planifolia
HPP92_011073 Vanilla planifolia
Lalb_Chr17g0343291 Lupinus albus
Lalb_Chr18g0044901 Lupinus albus
Lj1g0023220 Lotus japonicus
Lj3g0001023 Lotus japonicus
Lj9A537G36 Lonicera japonica
Lsat_1_v5_gn_1_39161 Lactuca sativa
Lsat_1_v5_gn_1_8840 Lactuca sativa
Lsat_1_v5_gn_4_92141 Lactuca sativa
Lsat_1_v5_gn_5_160641 Lactuca sativa
Manes.11G013200 Manihot esculenta
Mapoly0002s0094 Marchantia polymorpha
MBI13_g01688_MAGBIO Magnolia biondii
MBI13_g01689_MAGBIO Magnolia biondii
MD09G1173400 Malus domestica
MD17G1153700 Malus domestica
Medtr8g023040 Medicago truncatula
MELO3C024310.2 Cucumis melo
Migut.D00915 Erythranthe guttata
MSTRG.22520 Avicennia marina
Nitab4.5_0000357g0150 Nicotiana tabacum
Nitab4.5_0003981g0090 Nicotiana tabacum
Nitab4.5_0004589g0010 Nicotiana tabacum
Nitab4.5_0008798g0030 Nicotiana tabacum
Nn6g35716 Nelumbo nucifera
Nn6g35722 Nelumbo nucifera
Oeu006748.1 Olea europaea
Oeu013440.1 Olea europaea
Oeu015474.1 Olea europaea
Oeu033128.1 Olea europaea
Os12g0497400 Oryza sativa ssp. japonica
Peaxi162Scf00038g02253 Petunia axillaris
PGR102G0694 Punica granatum
PGSC0003DMG400003233 Solanum tuberosum
PGSC0003DMG400028851 Solanum tuberosum
Phvul.009G262000 Phaseolus vulgaris
Phvul.010G123700 Phaseolus vulgaris
Potri.001G163300 Populus trichocarpa
Potri.003G072100 Populus trichocarpa
Pp3c16_17800 Physcomitrium patens
Pp3c3_36280 Physcomitrium patens
Pp3c5_19430 Physcomitrium patens
PRCOL_00001985 Prasinoderma coloniale
Prupe.3G031500 Prunus persica
Psat4g165760 Pisum sativum
PSO135G0363 Papaver somniferum
PSO724G0358 Papaver somniferum
QL05p001373 Quercus lobata
RcHm_v2.0_Chr2g0147751 Rosa chinensis
Rhsim08G0244100 Rhododendron simsii
Sabra01G0129400 Salix brachista
Sabra03G0042900 Salix brachista
SalBow6G1171 Salvia bowleyana
SalBow7G2362 Salvia bowleyana
Sc12g0010900 Simmondsia chinensis
Sed0028223 Sechium edule
SEGI_15203 Sequoiadendron giganteum
SEGI_17135 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02093 Striga asiatica
SGA_v2.0_scaffold71G23916 Striga asiatica
SMO203G0081 Selaginella moellendorffii
Solyc12g049580.2 Solanum lycopersicum
Sopen12g024050 Solanum pennellii
Sopen12g024060 Solanum pennellii
Sp1g40370 Schrenkiella parvula
Sp5g27430 Schrenkiella parvula
TAR383G0367 Trochodendron aralioides
TAR626G1035 Trochodendron aralioides
TAR629G1052 Trochodendron aralioides
THA.LOC104815600 Tarenaya hassleriana
Thecc.06G129400 Theobroma cacao
Thhalv10011350m.g Eutrema salsugineum
Thhalv10018714m.g Eutrema salsugineum
TPR.G18158 Trifolium pratense
TWI14G1096 Tripterygium wilfordii
TWI23G0788 Tripterygium wilfordii
vmacro15082 Vaccinium macrocarpon
VMungo0331G0997 Vigna mungo
VMungo1309G1832 Vigna mungo
VMungo1383G0546 Vigna mungo
Zm00001eb138200 Zea mays

User provided reference genes

Program Settings