Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08580 Brassica napus
A06p15120 Brassica napus
A07p29240 Brassica napus
A07p40430 Brassica napus
A08p30100 Brassica napus
Aa31LG4G4980 Aethionema arabicum
Aa31LG7G3680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3400 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3951 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1022 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1608 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2469 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.143 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1991 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4462 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5096 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.782 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2500 Anthoceros agrestis
Actinidia04929 Actinidia chinensis
Actinidia04930 Actinidia chinensis
Actinidia19062 Actinidia chinensis
Actinidia34976 Actinidia chinensis
Ah.02g113130 Amaranthus hybridus
AL1G31480 Arabidopsis lyrata
AL2G34640 Arabidopsis lyrata
Aqoxy3G00809 Aquilegia oxysepala
Aqoxy3G03237 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1R97WW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I97YLG Arachis hypogaea
AT1G18900 Arabidopsis thaliana
AT1G74750 Arabidopsis thaliana
ATR0006G044 Amborella trichopoda
ATR0661G551 Amborella trichopoda
Atru.chr9.2336 Acer truncatum
AUR62008344 Chenopodium quinoa
AUR62021753 Chenopodium quinoa
BcaB02g06965 Brassica carinata
BcaB03g12946 Brassica carinata
BcaB03g12947 Brassica carinata
BcaB03g14475 Brassica carinata
BcaB07g31914 Brassica carinata
BcaC05g25795 Brassica carinata
BcaC07g38966 Brassica carinata
BcaC08g46901 Brassica carinata
BcaC08g46918 Brassica carinata
BolC5t30434H Brassica oleracea
BolC6t38429H Brassica oleracea
BolC6t39914H Brassica oleracea
BolC8t49530H Brassica oleracea
BraA06t24627Z Brassica rapa
BraA07t30563Z Brassica rapa
BraA07t31585Z Brassica rapa
BraA08t34945Z Brassica rapa
BraA09t36685Z Brassica rapa
C03p93360 Brassica napus
C05p17340 Brassica napus
C06p33140 Brassica napus
C06p48780 Brassica napus
C08p19050 Brassica napus
CAN.G999.30 Capsicum annuum
CANSAT80G2283 Cannabis sativa
CARHR019550 Cardamine hirsuta
CARHR068060 Cardamine hirsuta
Carub.0001s1855 Capsella rubella
Carub.0002s2154 Capsella rubella
Ca_26037_v3 Cicer arietinum L.
Cc04_g15850 Coffea canephora
CDE06G0164 Ceratophyllum demersum
Cfa019013 Carpinus fangiana
Ciclev10018829m.g Citrus clementina
CiPaw.11G036400 Carya illinoinensis
ClCG06G016440 Citrullus lanatus
COL.COLO4_37914 Corchorus olitorius
Cpa.g.sc17.195 Carica papaya
CsaV3_1G002080 Cucumis sativus L.
CSS0036009 Camellia sinensis var. sinensis
CSS0048290 Camellia sinensis var. sinensis
DCAR_005313 Daucus carota
Dinv19904 Davidia involucrata
Dinv38652 Davidia involucrata
Duzib084G0772 Durio zibethinus
Duzib205G1164 Durio zibethinus
ECA232G1217 Erigeron canadensis
EL10Ac5g10922 Beta vulgaris
Eucgr.K02912 Eucalyptus grandis
FAN04G1937 Fragaria x ananassa
FAN08G0428 Fragaria x ananassa
FAN13G1290 Fragaria x ananassa
FAN18G0859 Fragaria x ananassa
FvH4_5g15730 Fragaria vesca
Glyma.04G175400 Glycine max
Glyma.05G030900 Glycine max
Glyma.06G189500 Glycine max
Glyma.17G095900 Glycine max
Gohir.A11G028901 Gossypium hirsutum
Gohir.D11G032200 Gossypium hirsutum
Gorai.007G035000 Gossypium raimondii
GSVIVG01008078001 Vitis vinifera
HanXRQChr09g0271291 Helianthus annuus
Haze_07393 Corylus avellana
Hma1.2p1_0104F.1_g050360 Hydrangea macrophylla
Lalb_Chr08g0235971 Lupinus albus
Lj1g0021535 Lotus japonicus
Lj5P117T35 Lonicera japonica
Lsat_1_v5_gn_4_106880 Lactuca sativa
Manes.06G097200 Manihot esculenta
Mapoly0001s0055 Marchantia polymorpha
Mapoly0014s0054 Marchantia polymorpha
Mapoly0015s0193 Marchantia polymorpha
Mapoly0022s0009 Marchantia polymorpha
Mapoly0026s0069 Marchantia polymorpha
Mapoly0031s0063 Marchantia polymorpha
Mapoly0047s0077 Marchantia polymorpha
Mapoly0050s0075 Marchantia polymorpha
Mapoly0089s0054 Marchantia polymorpha
Mapoly0096s0019 Marchantia polymorpha
Mapoly0114s0020 Marchantia polymorpha
MD06G1185900 Malus domestica
MD14G1192100 Malus domestica
Medtr3g045420 Medicago truncatula
MELO3C017149.2 Cucumis melo
Migut.I00116 Erythranthe guttata
Nitab4.5_0004478g0010 Nicotiana tabacum
Nitab4.5_0007282g0060 Nicotiana tabacum
Nn4g23007 Nelumbo nucifera
Oeu006174.1 Olea europaea
Os12g0638900 Oryza sativa ssp. japonica
Peaxi162Scf00009g00051 Petunia axillaris
Peaxi162Scf00375g00912 Petunia axillaris
PGR044G0186 Punica granatum
PGSC0003DMG400013180 Solanum tuberosum
Phvul.009G190599 Phaseolus vulgaris
Potri.015G066400 Populus trichocarpa
Pp3c3_2440 Physcomitrium patens
Pp3c6_3910 Physcomitrium patens
Pp3c7_10060 Physcomitrium patens
Prupe.5G184700 Prunus persica
Psat5g196320 Pisum sativum
Psat6g005680 Pisum sativum
PSO591G0491 Papaver somniferum
PSO782G0394 Papaver somniferum
PSO832G1391 Papaver somniferum
QL10p014896 Quercus lobata
RcHm_v2.0_Chr7g0180381 Rosa chinensis
Rhsim12G0159600 Rhododendron simsii
Sabra15G0091500 Salix brachista
SalBow5G5059 Salvia bowleyana
Sc04g0002340 Simmondsia chinensis
Sed0004776 Sechium edule
SGA_v2.0_scaffold25G10886 Striga asiatica
SGA_v2.0_scaffold56G20067 Striga asiatica
SHI32576 Sapria himalayana
SMO271G0164 Selaginella moellendorffii
SMO356G0646 Selaginella moellendorffii
SMO367G0297 Selaginella moellendorffii
Solyc03g113380.4 Solanum lycopersicum
Sopen03g032430 Solanum pennellii
Sp1g16880 Schrenkiella parvula
Sp5g29870 Schrenkiella parvula
TAR371G0979 Trochodendron aralioides
TAR374G0794 Trochodendron aralioides
TAR629G1274 Trochodendron aralioides
THA.LOC104809214 Tarenaya hassleriana
Thecc.03G077200 Theobroma cacao
Thhalv10009547m.g Eutrema salsugineum
Thhalv10018113m.g Eutrema salsugineum
TPR.G11874 Trifolium pratense
TWI15G0380 Tripterygium wilfordii
VMungo1309G1671 Vigna mungo
Zm00001eb033110 Zea mays
Zm00001eb134080 Zea mays
Zm00001eb262590 Zea mays

User provided reference genes

Program Settings