Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25360 Brassica napus
A06p19650 Brassica napus
Aa31LG4G16630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.106 Anthoceros agrestis
Actinidia19095 Actinidia chinensis
Ah.11g051660 Amaranthus hybridus
AL5G27310 Arabidopsis lyrata
Aqoxy3G01025 Aquilegia oxysepala
Aqoxy3G02964 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7S5VF9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGZ6UB Arachis hypogaea
AT3G47990 Arabidopsis thaliana
ATR0730G177 Amborella trichopoda
Atru.chr9.2453_Atru.chr9.2454 Acer truncatum
AUR62008220 Chenopodium quinoa
AUR62030973 Chenopodium quinoa
BcaB01g00856 Brassica carinata
BcaB02g10676 Brassica carinata
BcaB03g13800 Brassica carinata
BcaB05g22899 Brassica carinata
BcaB07g32678 Brassica carinata
BcaB08g36240 Brassica carinata
BcaC01g04154 Brassica carinata
BcaC07g39282 Brassica carinata
BcaC09g49837 Brassica carinata
BolC1t03179H Brassica oleracea
BolC8t49927H Brassica oleracea
BraA01t02485Z Brassica rapa
BraA06t25045Z Brassica rapa
C01p32380 Brassica napus
C08p22910 Brassica napus
CANSAT64G3000 Cannabis sativa
CANSAT80G1493 Cannabis sativa
CARHR156710 Cardamine hirsuta
CARHR276610 Cardamine hirsuta
Carub.0005s1410 Capsella rubella
Ca_21911_v3 Cicer arietinum L.
CBR_g41084 Chara braunii
Cc04_g13750 Coffea canephora
CDE06G1420 Ceratophyllum demersum
Ciclev10020585m.g Citrus clementina
CiPaw.11G027500 Carya illinoinensis
ClCG06G016940 Citrullus lanatus
COL.COLO4_04600 Corchorus olitorius
Cpa.g.sc124.49 Carica papaya
CsaV3_1G001570 Cucumis sativus L.
CsaV3_1G008430 Cucumis sativus L.
CSS0015009 Camellia sinensis var. sinensis
DCAR_026700 Daucus carota
DCAR_031316 Daucus carota
Dinv09148 Davidia involucrata
Dinv20664 Davidia involucrata
Duzib068G0125 Durio zibethinus
Duzib084G0606 Durio zibethinus
Duzib205G1726 Durio zibethinus
ECA232G0181 Erigeron canadensis
ECA246G0603 Erigeron canadensis
ECA247G0373 Erigeron canadensis
EL10Ac5g10758 Beta vulgaris
Eucgr.B00369 Eucalyptus grandis
FAN13G2227 Fragaria x ananassa
FvH4_5g05210 Fragaria vesca
Glyma.04G182100 Glycine max
Glyma.05G037000 Glycine max
Glyma.06G183300 Glycine max
Glyma.17G090200 Glycine max
Gohir.A03G096433 Gossypium hirsutum
Gohir.D02G117400 Gossypium hirsutum
Gorai.005G136200 Gossypium raimondii
GSVIVG01007765001 Vitis vinifera
HanXRQChr04g0101541 Helianthus annuus
HanXRQChr05g0140081 Helianthus annuus
HanXRQChr09g0242151 Helianthus annuus
HanXRQChr09g0272261 Helianthus annuus
HanXRQChr10g0295751 Helianthus annuus
HanXRQChr16g0517301 Helianthus annuus
Haze_07458 Corylus avellana
Haze_26236 Corylus avellana
Hma1.2p1_0176F.1_g077530 Hydrangea macrophylla
HPP92_003097 Vanilla planifolia
Lalb_Chr08g0236431 Lupinus albus
Lalb_Chr13g0297851 Lupinus albus
Lj1g0011621 Lotus japonicus
Lj4g0025722 Lotus japonicus
Lj5C123T9 Lonicera japonica
Lsat_1_v5_gn_1_26880 Lactuca sativa
Lsat_1_v5_gn_3_127121 Lactuca sativa
Lsat_1_v5_gn_4_75421 Lactuca sativa
Lsat_1_v5_gn_5_17200 Lactuca sativa
Lsat_1_v5_gn_5_17220 Lactuca sativa
Manes.06G104100 Manihot esculenta
Manes.14G066700 Manihot esculenta
Mapoly0061s0121 Marchantia polymorpha
MBI10_g10241_MAGBIO Magnolia biondii
MD05G1071800 Malus domestica
MD06G1175600 Malus domestica
MD14G1182400 Malus domestica
Medtr4g106960 Medicago truncatula
MELO3C017097.2 Cucumis melo
Migut.D01921 Erythranthe guttata
Migut.I00021 Erythranthe guttata
MSTRG.11443 Avicennia marina
MSTRG.23125 Avicennia marina
MSTRG.4378 Avicennia marina
Nitab4.5_0000003g0530 Nicotiana tabacum
Nitab4.5_0000058g0220 Nicotiana tabacum
Nitab4.5_0000852g0060 Nicotiana tabacum
Nitab4.5_0001017g0030 Nicotiana tabacum
Nitab4.5_0005862g0030 Nicotiana tabacum
Nn3g16881 Nelumbo nucifera
Nn4g22787 Nelumbo nucifera
Nn5g26888 Nelumbo nucifera
Oeu022165.5 Olea europaea
Oeu024688.1 Olea europaea
Os05g0145000 Oryza sativa ssp. japonica
Peaxi162Scf00017g02833 Petunia axillaris
Peaxi162Scf00689g00326 Petunia axillaris
PGR083G2191 Punica granatum
PGSC0003DMG400024497 Solanum tuberosum
PGSC0003DMG400027094 Solanum tuberosum
Phvul.003G199700 Phaseolus vulgaris
Phvul.009G179400 Phaseolus vulgaris
Potri.012G079600 Populus trichocarpa
Potri.015G074900 Populus trichocarpa
Pp3c5_22880 Physcomitrium patens
Prupe.5G174900 Prunus persica
Psat4g057720 Pisum sativum
Psat5g110480 Pisum sativum
PSO017G1896 Papaver somniferum
PSO478G1894 Papaver somniferum
QL10p011905 Quercus lobata
QL10p058315 Quercus lobata
RcHm_v2.0_Chr5g0042751 Rosa chinensis
RcHm_v2.0_Chr7g0193701 Rosa chinensis
Rhsim03G0021500 Rhododendron simsii
Rhsim03G0021700 Rhododendron simsii
Rhsim12G0164000 Rhododendron simsii
Sabra12G0056900 Salix brachista
Sc12g0005380 Simmondsia chinensis
Sed0004154 Sechium edule
Sed0006960 Sechium edule
Sed0017203 Sechium edule
Sed0027524 Sechium edule
SEGI_24612 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10850 Striga asiatica
SGA_v2.0_scaffold90G27947 Striga asiatica
SMO347G0635 Selaginella moellendorffii
SMO367G0977 Selaginella moellendorffii
Solyc03g114280.3 Solanum lycopersicum
Solyc06g071420.3 Solanum lycopersicum
Sopen03g033380 Solanum pennellii
Sopen06g027700 Solanum pennellii
Sp2g25980 Schrenkiella parvula
Sp5g13990 Schrenkiella parvula
TAR371G1277 Trochodendron aralioides
TAR629G0666 Trochodendron aralioides
THA.LOC104798981 Tarenaya hassleriana
THA.LOC104818231 Tarenaya hassleriana
Thecc.03G010600 Theobroma cacao
Thhalv10010583m.g Eutrema salsugineum
Thhalv10010884m.g Eutrema salsugineum
TPR.G22006 Trifolium pratense
TPR.G37440 Trifolium pratense
TWI15G0436 Tripterygium wilfordii
TWI81G1008 Tripterygium wilfordii
unitig_749.g13473 Utricularia gibba
vmacro16604 Vaccinium macrocarpon
VMungo1215G2971 Vigna mungo
Zm00001eb162790 Zea mays
Zm00001eb341990 Zea mays
Zm00001eb342000 Zea mays
Zm00001eb346530 Zea mays

User provided reference genes

Program Settings