Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p67220 Brassica napus
A09p67230 Brassica napus
Aa31LG1G8350 Aethionema arabicum
Actinidia07526 Actinidia chinensis
Actinidia11304 Actinidia chinensis
Actinidia39854 Actinidia chinensis
AL1G15900 Arabidopsis lyrata
Aqoxy7G02132 Aquilegia oxysepala
Aqoxy7G02134 Aquilegia oxysepala
Aqoxy7G03601 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33ZKBH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.369X3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68X0LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KU5ADZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S79H68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZR8I8Y Arachis hypogaea
AT1G05950 Arabidopsis thaliana
ATR0686G221 Amborella trichopoda
Atru.chr3.1528 Acer truncatum
AUR62002294 Chenopodium quinoa
AUR62015396 Chenopodium quinoa
BcaC07g42097 Brassica carinata
BcaC07g42098 Brassica carinata
BcaC07g42099 Brassica carinata
BolC8t52678H Brassica oleracea
BolC8t52679H Brassica oleracea
BolC8t52680H Brassica oleracea
BraA09t42054Z Brassica rapa
BraA09t42055Z Brassica rapa
BraA09t42056Z Brassica rapa
C08p51510 Brassica napus
C08p51520 Brassica napus
CAN.G285.8 Capsicum annuum
CANSAT78G1401 Cannabis sativa
CARHR005480 Cardamine hirsuta
Carub.0001s0531 Capsella rubella
Ca_01262_v3 Cicer arietinum L.
Ca_20781_v3 Cicer arietinum L.
Cc03_g11420 Coffea canephora
Cc03_g11430 Coffea canephora
Cc03_g11440 Coffea canephora
CDE08G1584 Ceratophyllum demersum
Cfa015154 Carpinus fangiana
Ciclev10020610m.g Citrus clementina
Ciclev10020801m.g Citrus clementina
Ciclev10022885m.g Citrus clementina
Ciclev10023338m.g Citrus clementina
Ciclev10024150m.g Citrus clementina
Ciclev10024444m.g Citrus clementina
CiPaw.01G101100 Carya illinoinensis
ClCG08G004480 Citrullus lanatus
COL.COLO4_03321 Corchorus olitorius
COL.COLO4_20906 Corchorus olitorius
COL.COLO4_20907 Corchorus olitorius
COL.COLO4_33468 Corchorus olitorius
Cpa.g.sc9.266 Carica papaya
CsaV3_6G003850 Cucumis sativus L.
DCAR_027539 Daucus carota
DCAR_030957 Daucus carota
DCAR_031879 Daucus carota
Dinv44195 Davidia involucrata
Duzib212G0448 Durio zibethinus
ECA240G0221 Erigeron canadensis
EL10Ac3g05923 Beta vulgaris
Eucgr.G00171 Eucalyptus grandis
Eucgr.G00179 Eucalyptus grandis
Eucgr.G00183 Eucalyptus grandis
Eucgr.G00184 Eucalyptus grandis
Eucgr.G00188 Eucalyptus grandis
Eucgr.H00375 Eucalyptus grandis
FAN07G2191 Fragaria x ananassa
FAN12G0055 Fragaria x ananassa
FAN12G1510 Fragaria x ananassa
FAN15G2472 Fragaria x ananassa
FAN17G1176 Fragaria x ananassa
FAN22G1497 Fragaria x ananassa
FvH4_4g10700 Fragaria vesca
Glyma.11G128400 Glycine max
Glyma.12G052967 Glycine max
Glyma.12G053033 Glycine max
Glyma.13G343800 Glycine max
Glyma.15G030500 Glycine max
Gohir.A09G209900 Gossypium hirsutum
Gohir.D09G203266 Gossypium hirsutum
Gohir.D09G203332 Gossypium hirsutum
Gorai.006G227200 Gossypium raimondii
GSVIVG01010749001 Vitis vinifera
HanXRQChr03g0090111 Helianthus annuus
Haze_01516 Corylus avellana
Haze_01517 Corylus avellana
Hma1.2p1_0639F.1_g194000 Hydrangea macrophylla
Hund12007 Selenicereus undatus
Lalb_Chr01g0003201 Lupinus albus
Lalb_Chr14g0372441 Lupinus albus
Lj3A198G30 Lonicera japonica
Lj3g0000298 Lotus japonicus
Lj3g0002927 Lotus japonicus
Lj3g0014411 Lotus japonicus
Lj3g0024562 Lotus japonicus
Lj6A56G23 Lonicera japonica
Lj6A56T29 Lonicera japonica
Lj8A15T42 Lonicera japonica
Lj8A15T43 Lonicera japonica
Lj8A15T44 Lonicera japonica
Lsat_1_v5_gn_3_110821 Lactuca sativa
Manes.04G041450 Manihot esculenta
MBI08_g23493_MAGBIO Magnolia biondii
MBI08_g23495_MAGBIO Magnolia biondii
MBI08_g23496_MAGBIO Magnolia biondii
MD04G1007700 Malus domestica
Medtr0002s1280 Medicago truncatula
Medtr2g022300 Medicago truncatula
Medtr2g098710 Medicago truncatula
Medtr2g098720 Medicago truncatula
Medtr2g098730 Medicago truncatula
Medtr2g098740 Medicago truncatula
Medtr2g098770 Medicago truncatula
Medtr2g098780 Medicago truncatula
Medtr2g098830 Medicago truncatula
Medtr4g046083 Medicago truncatula
Medtr4g067090 Medicago truncatula
MELO3C011646.2 Cucumis melo
Migut.B01848 Erythranthe guttata
Migut.N01559 Erythranthe guttata
Migut.O00022 Erythranthe guttata
MSTRG.28249 Avicennia marina
Nitab4.5_0000313g0050 Nicotiana tabacum
Nitab4.5_0002475g0040 Nicotiana tabacum
Nitab4.5_0005003g0040 Nicotiana tabacum
Nitab4.5_0009641g0050 Nicotiana tabacum
Nn1g09697 Nelumbo nucifera
Oeu032957.2 Olea europaea
Os09g0514500 Oryza sativa ssp. japonica
Peaxi162Scf00297g01121 Petunia axillaris
Peaxi162Scf00297g01124 Petunia axillaris
Peaxi162Scf00297g01127 Petunia axillaris
PGR031G3172 Punica granatum
PGSC0003DMG400002575 Solanum tuberosum
Phvul.011G055000 Phaseolus vulgaris
Potri.007G127800 Populus trichocarpa
Prupe.1G191700 Prunus persica
Psat1g007120 Pisum sativum
Psat7g213720 Pisum sativum
PSO832G3772 Papaver somniferum
QL10p048538 Quercus lobata
RcHm_v2.0_Chr4g0407011 Rosa chinensis
Rhsim02G0076700 Rhododendron simsii
Sabra07G0104100 Salix brachista
Sabra17G0020100 Salix brachista
SalBow3G0974 Salvia bowleyana
SalBow5G1086 Salvia bowleyana
Sc11g0003780 Simmondsia chinensis
Sed0002856 Sechium edule
Sed0018268 Sechium edule
SEGI_15340 Sequoiadendron giganteum
SEGI_36759 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10696 Striga asiatica
SHI23539 Sapria himalayana
Solyc03g121850.3 Solanum lycopersicum
Sopen03g040670 Solanum pennellii
Sopen07g034480 Solanum pennellii
Sp1g04770 Schrenkiella parvula
Sp1g04780 Schrenkiella parvula
TAR633G1822 Trochodendron aralioides
THA.LOC104826195 Tarenaya hassleriana
Thecc.04G186100 Theobroma cacao
Thhalv10007042m.g Eutrema salsugineum
TPR.G34235 Trifolium pratense
TPR.G35423 Trifolium pratense
TWI63G0993 Tripterygium wilfordii
VMungo1127G1790 Vigna mungo
Zm00001eb318340 Zea mays

User provided reference genes

Program Settings