Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09590 Brassica napus
A10p12860 Brassica napus
Aa31LG3G11560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3546 Anthoceros agrestis
Actinidia35391 Actinidia chinensis
Actinidia37162 Actinidia chinensis
Ah.06g181300 Amaranthus hybridus
AL8G31180 Arabidopsis lyrata
Aqoxy5G03484 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WG7ZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9SIV6F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AHDC81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1PCFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HAYR03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5ZFFA Arachis hypogaea
AT5G55610 Arabidopsis thaliana
ATR1126G058 Amborella trichopoda
Atru.chr2.3668 Acer truncatum
AUR62017071 Chenopodium quinoa
AUR62036423 Chenopodium quinoa
AUR62036429 Chenopodium quinoa
BcaB05g22217 Brassica carinata
BcaB08g35921 Brassica carinata
BcaC04g20215 Brassica carinata
BolC2t07705H Brassica oleracea
BolC9t57510H Brassica oleracea
BraA02t06023Z Brassica rapa
BraA10t43379Z Brassica rapa
C02p15980 Brassica napus
C09p46590 Brassica napus
CAN.G217.4 Capsicum annuum
CANSAT01G1348 Cannabis sativa
CANSAT01G2739 Cannabis sativa
CARHR268920 Cardamine hirsuta
Carub.0008s1598 Capsella rubella
Ca_04178_v3 Cicer arietinum L.
Ca_19377_v3 Cicer arietinum L.
CBR_g33924 Chara braunii
Cc02_g24500 Coffea canephora
CDE04G2763 Ceratophyllum demersum
CDE06G2507 Ceratophyllum demersum
Cfa002798 Carpinus fangiana
Ciclev10008892m.g Citrus clementina
CiPaw.01G209600 Carya illinoinensis
CiPaw.02G129700 Carya illinoinensis
ClCG09G021180 Citrullus lanatus
COL.COLO4_09810 Corchorus olitorius
Cpa.g.sc12.171 Carica papaya
CsaV3_7G018320 Cucumis sativus L.
CSS0000121 Camellia sinensis var. sinensis
CSS0006286 Camellia sinensis var. sinensis
CSS0032183 Camellia sinensis var. sinensis
Dinv10322 Davidia involucrata
Dinv40845 Davidia involucrata
Duzib170G0711 Durio zibethinus
Duzib213G1048 Durio zibethinus
ECA240G0169 Erigeron canadensis
ECA246G0082 Erigeron canadensis
EL10Ac4g07603 Beta vulgaris
Eucgr.F02061 Eucalyptus grandis
FAN11G2481 Fragaria x ananassa
FAN21G2863 Fragaria x ananassa
FAN25G0469 Fragaria x ananassa
FvH4_3g29460 Fragaria vesca
Glyma.02G067000 Glycine max
Glyma.16G148100 Glycine max
Gohir.A01G090300 Gossypium hirsutum
Gohir.A04G002800 Gossypium hirsutum
Gohir.A13G133800 Gossypium hirsutum
Gohir.D01G075600 Gossypium hirsutum
Gohir.D06G153600 Gossypium hirsutum
Gohir.D13G137200 Gossypium hirsutum
Gorai.002G098800 Gossypium raimondii
Gorai.002G215300 Gossypium raimondii
Gorai.010G179600 Gossypium raimondii
Gorai.013G151000 Gossypium raimondii
Gorai.013G153800 Gossypium raimondii
GSVIVG01014646001 Vitis vinifera
GSVIVG01014652001 Vitis vinifera
HanXRQChr05g0159911 Helianthus annuus
HanXRQChr07g0195741 Helianthus annuus
Haze_03265 Corylus avellana
Haze_25099 Corylus avellana
Hma1.2p1_0036F.1_g022540 Hydrangea macrophylla
HPP92_020450 Vanilla planifolia
HPP92_020483 Vanilla planifolia
Hund01907 Selenicereus undatus
Hund23121 Selenicereus undatus
Lalb_Chr01g0018421 Lupinus albus
Lalb_Chr15g0083341 Lupinus albus
Lj1A888G37 Lonicera japonica
Lj2g0012663 Lotus japonicus
Lj3g0026799 Lotus japonicus
Lj6g0025058 Lotus japonicus
Lj8A177T32 Lonicera japonica
Lsat_1_v5_gn_1_76240 Lactuca sativa
Lsat_1_v5_gn_5_1501 Lactuca sativa
Manes.03G140000 Manihot esculenta
Manes.15G061500 Manihot esculenta
Mapoly0030s0146 Marchantia polymorpha
MBI16_g14388_MAGBIO Magnolia biondii
MBI16_g14390_MAGBIO Magnolia biondii
MBI16_g43434_MAGBIO Magnolia biondii
MBI19_g20151_MAGBIO Magnolia biondii
MCO08G149 Micromonas commoda
MD00G1008300 Malus domestica
MD00G1099100 Malus domestica
MD11G1201600 Malus domestica
Medtr4g055190 Medicago truncatula
Medtr4g055205 Medicago truncatula
Medtr4g086170 Medicago truncatula
Medtr6g005540 Medicago truncatula
MELO3C024919.2 Cucumis melo
Migut.B01283 Erythranthe guttata
MSTRG.20573 Avicennia marina
Nitab4.5_0000083g0020 Nicotiana tabacum
Nitab4.5_0000276g0150 Nicotiana tabacum
Nn1g03214 Nelumbo nucifera
Nn1g07482 Nelumbo nucifera
Oeu005967.2 Olea europaea
Os12g0498800 Oryza sativa ssp. japonica
Peaxi162Scf00529g00814 Petunia axillaris
PGR083G0661 Punica granatum
PGSC0003DMG400003290 Solanum tuberosum
PGSC0003DMG400010530 Solanum tuberosum
PGSC0003DMG401021129 Solanum tuberosum
Phvul.004G069300 Phaseolus vulgaris
Phvul.006G074800 Phaseolus vulgaris
Potri.001G366000 Populus trichocarpa
Pp3c12_2880 Physcomitrium patens
Pp3c17_1290 Physcomitrium patens
PRCOL_00005800 Prasinoderma coloniale
Prupe.4G240000 Prunus persica
Psat1g055880 Pisum sativum
Psat7g190200 Pisum sativum
PSO210G1542 Papaver somniferum
PSO302G0019 Papaver somniferum
QL08p004797 Quercus lobata
RcHm_v2.0_Chr5g0053951 Rosa chinensis
RcHm_v2.0_Chr5g0077271 Rosa chinensis
Rhsim04G0013700 Rhododendron simsii
Sabra16G0239500 Salix brachista
SalBow3G0415 Salvia bowleyana
SalBow6G4871 Salvia bowleyana
Sc03g0011140 Simmondsia chinensis
Sed0023598 Sechium edule
Sed0026445 Sechium edule
SEGI_11688 Sequoiadendron giganteum
SEGI_22606 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32745 Striga asiatica
SMO172G0209 Selaginella moellendorffii
Solyc04g056610.3 Solanum lycopersicum
Sopen04g025530 Solanum pennellii
Sp6g17530 Schrenkiella parvula
TAR626G1493 Trochodendron aralioides
TAR629G1249 Trochodendron aralioides
TAR629G1509 Trochodendron aralioides
THA.LOC104817703 Tarenaya hassleriana
Thecc.07G016200 Theobroma cacao
Thecc.07G016400 Theobroma cacao
Thhalv10014039m.g Eutrema salsugineum
TPR.G15593 Trifolium pratense
TPR.G31066 Trifolium pratense
TPR.G8724 Trifolium pratense
TWI39G0963 Tripterygium wilfordii
unitig_26.g10112 Utricularia gibba
vmacro09656 Vaccinium macrocarpon
VMungo0251G0276 Vigna mungo
VMungo0464G1872 Vigna mungo
VMungo0540G1827 Vigna mungo
VMungo1127G1263 Vigna mungo
Zm00001eb409570 Zea mays

User provided reference genes

Program Settings