Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G12930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis
Actinidia17620 Actinidia chinensis
Actinidia26308 Actinidia chinensis
Actinidia36304 Actinidia chinensis
Ah.16g102220 Amaranthus hybridus
AL3G11710 Arabidopsis lyrata
Aqoxy3G00414 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2VHL38 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FI956K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea
AT3G02420 Arabidopsis thaliana
ATR0730G004 Amborella trichopoda
Atru.chr10.1868 Acer truncatum
AUR62008952 Chenopodium quinoa
AUR62014550 Chenopodium quinoa
BcaB04g21412 Brassica carinata
BcaC02g08620 Brassica carinata
BcaC05g30354 Brassica carinata
BcaC09g47699 Brassica carinata
BNapus_Darmor_BZH_scaffold_208p00070 Brassica napus
BolC1t05906H Brassica oleracea
BolC5t35082H Brassica oleracea
BraA05t23141Z Brassica rapa
BraSC141t45626Z Brassica rapa
CAN.G153.14 Capsicum annuum
CANSAT64G0921 Cannabis sativa
CARHR076390 Cardamine hirsuta
Carub.0003s0151 Capsella rubella
Ca_14084_v3 Cicer arietinum L.
CBR_g39496 Chara braunii
CBR_g42155 Chara braunii
Cc07_g04980 Coffea canephora
CDE05G2628 Ceratophyllum demersum
CDE06G1497 Ceratophyllum demersum
CDE08G1388 Ceratophyllum demersum
Cfa007968 Carpinus fangiana
Ciclev10012116m.g Citrus clementina
CiPaw.03G006000 Carya illinoinensis
CiPaw.04G003700 Carya illinoinensis
ClCG05G012000 Citrullus lanatus
ClCG11G005270 Citrullus lanatus
COL.COLO4_04619 Corchorus olitorius
Cpa.g.sc179.42 Carica papaya
Cre02.g099650 Chlamydomonas reinhardtii
CsaV3_5G039030 Cucumis sativus L.
CSS0015718 Camellia sinensis var. sinensis
CSS0021599 Camellia sinensis var. sinensis
DCAR_010977 Daucus carota
Dinv33917 Davidia involucrata
Dinv33918 Davidia involucrata
Dinv34868 Davidia involucrata
Duzib133G0960 Durio zibethinus
Duzib268G0320 Durio zibethinus
ECA232G0981 Erigeron canadensis
EL10Ac2g04623 Beta vulgaris
Eucgr.I02122 Eucalyptus grandis
FAN05G3345 Fragaria x ananassa
FvH4_6g45520 Fragaria vesca
Glyma.13G047900 Glycine max
Glyma.19G043700 Glycine max
Gohir.A03G111050 Gossypium hirsutum
Gohir.A04G081800 Gossypium hirsutum
Gohir.A07G073300 Gossypium hirsutum
Gohir.A07G176100 Gossypium hirsutum
Gohir.A08G037600 Gossypium hirsutum
Gohir.A10G225466 Gossypium hirsutum
Gohir.A13G091200 Gossypium hirsutum
Gohir.A13G168300 Gossypium hirsutum
Gohir.D07G078000 Gossypium hirsutum
Gohir.D07G183200 Gossypium hirsutum
Gohir.D08G047900 Gossypium hirsutum
Gorai.001G082400 Gossypium raimondii
Gorai.001G203600 Gossypium raimondii
Gorai.004G047400 Gossypium raimondii
GSVIVG01036463001 Vitis vinifera
HanXRQChr02g0053871 Helianthus annuus
HanXRQChr07g0200191 Helianthus annuus
HanXRQChr09g0263441 Helianthus annuus
Haze_14102 Corylus avellana
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla
HPP92_003788 Vanilla planifolia
HPP92_011599 Vanilla planifolia
Hund13742 Selenicereus undatus
Hund16109 Selenicereus undatus
Lalb_Chr17g0336551 Lupinus albus
Lj2g0019369 Lotus japonicus
Lj4A130T17 Lonicera japonica
Lj7A9T84 Lonicera japonica
Lsat_1_v5_gn_2_86560 Lactuca sativa
Lsat_1_v5_gn_4_175840 Lactuca sativa
Manes.02G065500 Manihot esculenta
Mapoly0013s0171 Marchantia polymorpha
MBI16_g36053_MAGBIO Magnolia biondii
MD09G1082200 Malus domestica
MD17G1072900 Malus domestica
Medtr6g016780 Medicago truncatula
MELO3C022067.2 Cucumis melo
Migut.H00537 Erythranthe guttata
Migut.K00863 Erythranthe guttata
MSTRG.23829 Avicennia marina
Nitab4.5_0000612g0160 Nicotiana tabacum
Nitab4.5_0003161g0040 Nicotiana tabacum
Nitab4.5_0004420g0040 Nicotiana tabacum
Nitab4.5_0009272g0060 Nicotiana tabacum
Nn3g17651 Nelumbo nucifera
Nn4g23653 Nelumbo nucifera
Oeu025120.1 Olea europaea
Oeu032872.2 Olea europaea
Oeu049330.1 Olea europaea
Os01g0604700 Oryza sativa ssp. japonica
Os01g0641700 Oryza sativa ssp. japonica
Os05g0589000 Oryza sativa ssp. japonica
Peaxi162Scf00479g00310 Petunia axillaris
Peaxi162Scf01056g00238 Petunia axillaris
PGR004G2426 Punica granatum
PGR042G1023 Punica granatum
PGSC0003DMG400010091 Solanum tuberosum
PGSC0003DMG400018768 Solanum tuberosum
Phvul.004G073300 Phaseolus vulgaris
Potri.004G104900 Populus trichocarpa
Potri.017G110600 Populus trichocarpa
Pp3c7_9290 Physcomitrium patens
Prupe.3G241500 Prunus persica
Psat1g062200 Pisum sativum
PSO017G6828 Papaver somniferum
PSO063G1546 Papaver somniferum
PSO478G0222 Papaver somniferum
PSO782G5396 Papaver somniferum
QL02p053385 Quercus lobata
QL02p053393 Quercus lobata
RcHm_v2.0_Chr2g0163461 Rosa chinensis
Rhsim08G0080100 Rhododendron simsii
Rhsim10G0064500 Rhododendron simsii
Sabra04G0076900 Salix brachista
SalBow1G4702 Salvia bowleyana
SalBow1G4945 Salvia bowleyana
Sc10g0001400 Simmondsia chinensis
Sed0014814 Sechium edule
Sed0017773 Sechium edule
Sed0022702 Sechium edule
SEGI_19153 Sequoiadendron giganteum
SEGI_38032 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41658 Striga asiatica
SHI25579 Sapria himalayana
SMO164G0101 Selaginella moellendorffii
Solyc02g089780.3 Solanum lycopersicum
Solyc03g045090.3 Solanum lycopersicum
Sopen03g009550 Solanum pennellii
Sp3g01460 Schrenkiella parvula
TAR371G1199 Trochodendron aralioides
TAR622G0876 Trochodendron aralioides
TAR629G1013 Trochodendron aralioides
THA.LOC104827150 Tarenaya hassleriana
Thecc.04G143800 Theobroma cacao
Thhalv10021061m.g Eutrema salsugineum
TPR.G28780 Trifolium pratense
TPR.G9685 Trifolium pratense
TWI74G0934 Tripterygium wilfordii
TWI77G0983 Tripterygium wilfordii
unitig_32.g10761 Utricularia gibba
unitig_52.g17623 Utricularia gibba
unitig_52.g17624 Utricularia gibba
unitig_62.g23397 Utricularia gibba
vmacro05581 Vaccinium macrocarpon
vmacro18101 Vaccinium macrocarpon
VMungo0464G1781 Vigna mungo
Zm00001eb158750 Zea mays
Zm00001eb161490 Zea mays
Zm00001eb297500 Zea mays

User provided reference genes

Program Settings