Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02310 Brassica napus
Aa31LG11G6530 Aethionema arabicum
Aa31LG3G4060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.570 Anthoceros agrestis
Ah.16g103890 Amaranthus hybridus
AL3G22590 Arabidopsis lyrata
AL467U10010 Arabidopsis lyrata
AL6G15350 Arabidopsis lyrata
Aqoxy1G01303 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0XTL3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DADU25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYP4ZT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3EDXB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N2R911 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PDR9Z8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4ULTV Arachis hypogaea
AT3G11040 Arabidopsis thaliana
AT3G61010 Arabidopsis thaliana
AT5G05460 Arabidopsis thaliana
ATR0174G011 Amborella trichopoda
Atru.chr12.101 Acer truncatum
Atru.chr12.102 Acer truncatum
AUR62012305 Chenopodium quinoa
AUR62022946 Chenopodium quinoa
BcaB01g05761 Brassica carinata
BcaB01g05950 Brassica carinata
BcaB03g16457 Brassica carinata
BcaB04g21152 Brassica carinata
BcaB04g21155 Brassica carinata
BcaB04g21156 Brassica carinata
BcaB04g21158 Brassica carinata
BcaB07g33013 Brassica carinata
BcaB07g33265 Brassica carinata
BcaB07g33267 Brassica carinata
BcaC06g31359 Brassica carinata
BcaC09g48150 Brassica carinata
BcaC09g48154 Brassica carinata
BolC1t05338H Brassica oleracea
BolC3t12817H Brassica oleracea
BraA01t04202Z Brassica rapa
BraA01t04204Z Brassica rapa
BraA01t04205Z Brassica rapa
BraA03t09594Z Brassica rapa
C03p02630 Brassica napus
CAN.G19.7 Capsicum annuum
CANSAT56G1738 Cannabis sativa
CANSAT56G2024 Cannabis sativa
CARHR085620 Cardamine hirsuta
CARHR207790 Cardamine hirsuta
Carub.0003s1033 Capsella rubella
Carub.0006s0436 Capsella rubella
Ca_15154_v3 Cicer arietinum L.
CBR_g6382 Chara braunii
Cc02_g06030 Coffea canephora
CDE06G0669 Ceratophyllum demersum
Ciclev10030777m.g Citrus clementina
Ciclev10031026m.g Citrus clementina
CiPaw.02G195800 Carya illinoinensis
CiPaw.12G018900 Carya illinoinensis
ClCG07G004550 Citrullus lanatus
ClCG07G004560 Citrullus lanatus
COL.COLO4_25787 Corchorus olitorius
Cpa.g.sc19.130 Carica papaya
Cpa.g.sc19.132 Carica papaya
Cre13.g582250 Chlamydomonas reinhardtii
CsaV3_5G010480 Cucumis sativus L.
CsaV3_5G010500 Cucumis sativus L.
CsaV3_5G010510 Cucumis sativus L.
CSS0045603 Camellia sinensis var. sinensis
DCAR_011846 Daucus carota
Dinv10587 Davidia involucrata
Dinv21778 Davidia involucrata
Dinv21779 Davidia involucrata
Duzib106G0498 Durio zibethinus
Duzib128G0764 Durio zibethinus
ECA238G2061 Erigeron canadensis
EL10Ac2g04896 Beta vulgaris
Eucgr.J00174 Eucalyptus grandis
FAN01G1500 Fragaria x ananassa
FAN03G3092 Fragaria x ananassa
FAN06G4674 Fragaria x ananassa
FAN10G1680 Fragaria x ananassa
FvH4_7g25120 Fragaria vesca
Glyma.02G262200 Glycine max
Glyma.02G262251 Glycine max
Glyma.02G262300 Glycine max
Glyma.11G232700 Glycine max
Glyma.14G056500 Glycine max
Glyma.14G056600 Glycine max
Glyma.18G024300 Glycine max
Gohir.A05G332000 Gossypium hirsutum
Gohir.A10G238300 Gossypium hirsutum
Gohir.D04G070700 Gossypium hirsutum
Gohir.D10G250200 Gossypium hirsutum
Gorai.011G290600 Gossypium raimondii
Gorai.012G079500 Gossypium raimondii
GSVIVG01032751001 Vitis vinifera
HanXRQChr17g0536301 Helianthus annuus
Haze_17272 Corylus avellana
Haze_17281 Corylus avellana
HPP92_006774 Vanilla planifolia
Hund13901 Selenicereus undatus
Lalb_Chr08g0231511 Lupinus albus
Lj1A961T78 Lonicera japonica
Lj6g0014816 Lotus japonicus
Lj8A62T48 Lonicera japonica
Lsat_1_v5_gn_2_125521 Lactuca sativa
Manes.10G008500 Manihot esculenta
Manes.10G008700 Manihot esculenta
Mapoly0073s0082 Marchantia polymorpha
MD01G1158000 Malus domestica
MD07G1226700 Malus domestica
Medtr3g071610 Medicago truncatula
MELO3C018385.2 Cucumis melo
MELO3C018386.2 Cucumis melo
MELO3C034437.2 Cucumis melo
Migut.F00635 Erythranthe guttata
Migut.F01473 Erythranthe guttata
MSTRG.8925 Avicennia marina
Nitab4.5_0000058g0090 Nicotiana tabacum
Nitab4.5_0003710g0040 Nicotiana tabacum
Nn2g10988 Nelumbo nucifera
Oeu043174.1 Olea europaea
Os05g0346500 Oryza sativa ssp. japonica
Peaxi162Scf00284g00526 Petunia axillaris
PGR044G0681 Punica granatum
PGR142G0892 Punica granatum
PGSC0003DMG400023947 Solanum tuberosum
Phvul.001G245900 Phaseolus vulgaris
Potri.008G072901 Populus trichocarpa
Potri.008G073001 Populus trichocarpa
Potri.010G184200 Populus trichocarpa
Potri.010G184300 Populus trichocarpa
Pp3c4_19160 Physcomitrium patens
Prupe.2G256300 Prunus persica
Psat5g130680 Pisum sativum
PSO349G0044 Papaver somniferum
PSO478G2175 Papaver somniferum
PSO765G0033 Papaver somniferum
QL08p063798 Quercus lobata
RcHm_v2.0_Chr1g0370971 Rosa chinensis
Rhsim03G0146900 Rhododendron simsii
Rhsim03G0147100 Rhododendron simsii
Sabra08G0054200 Salix brachista
Sabra10G0141400 Salix brachista
Sabra10G0141500 Salix brachista
SalBow3G0248 Salvia bowleyana
SalBow3G2100 Salvia bowleyana
Sc11g0005320 Simmondsia chinensis
Sed0002479 Sechium edule
SEGI_36115 Sequoiadendron giganteum
SGA_v2.0_scaffold395G50723 Striga asiatica
SGA_v2.0_scaffold395G50724 Striga asiatica
SGA_v2.0_scaffold395G50725 Striga asiatica
SGA_v2.0_scaffold60G20962 Striga asiatica
SMO351G0021 Selaginella moellendorffii
Solyc06g050930.3 Solanum lycopersicum
Sopen01g021300 Solanum pennellii
Sopen06g016660 Solanum pennellii
Sp3g09370 Schrenkiella parvula
Sp6g37380 Schrenkiella parvula
TAR623G0471 Trochodendron aralioides
THA.LOC104816686 Tarenaya hassleriana
Thecc.10G010900 Theobroma cacao
Thhalv10012879m.g Eutrema salsugineum
Thhalv10020200m.g Eutrema salsugineum
TPR.G27736 Trifolium pratense
TWI73G0078 Tripterygium wilfordii
unitig_32.g11775 Utricularia gibba
vmacro06948 Vaccinium macrocarpon
VMungo0647G1128 Vigna mungo
VMungo1383G0354 Vigna mungo
Zm00001eb347620 Zea mays

User provided reference genes

Program Settings