Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p23340 Brassica napus
Aa31LG2G8540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2330 Anthoceros agrestis
Actinidia14967 Actinidia chinensis
Actinidia14970 Actinidia chinensis
Actinidia36670 Actinidia chinensis
Ah.07g197270 Amaranthus hybridus
Ah.12g052420 Amaranthus hybridus
Ah.12g052430 Amaranthus hybridus
AL5G10370 Arabidopsis lyrata
Aqoxy5G03134 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KUY2JB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6YRHE Arachis hypogaea
AT2G01410 Arabidopsis thaliana
ATR0053G001 Amborella trichopoda
Atru.chr11.1192 Acer truncatum
Atru.chr11.1199 Acer truncatum
Atru.chr11.1779 Acer truncatum
AUR62010823 Chenopodium quinoa
AUR62010824 Chenopodium quinoa
BcaB02g11172 Brassica carinata
BcaB07g30747 Brassica carinata
BcaB08g34300 Brassica carinata
BcaC04g21591 Brassica carinata
BcaC06g31313 Brassica carinata
BcaC06g34181 Brassica carinata
BcaC06g34189 Brassica carinata
BolC7t43720H Brassica oleracea
BolC9t55873H Brassica oleracea
BraA09t37935Z Brassica rapa
C07p31800 Brassica napus
C09p30090 Brassica napus
CAN.G1298.2 Capsicum annuum
CAN.G849.4 Capsicum annuum
CANSAT11G0808 Cannabis sativa
CANSAT35G0597 Cannabis sativa
CARHR143920 Cardamine hirsuta
Carub.0005s0037 Capsella rubella
Ca_07073_v3 Cicer arietinum L.
Ca_12604_v3 Cicer arietinum L.
Ca_25714_v3 Cicer arietinum L.
Cc02_g26910 Coffea canephora
Cfa008606 Carpinus fangiana
Cfa010478 Carpinus fangiana
Ciclev10015653m.g Citrus clementina
CiPaw.05G249400 Carya illinoinensis
ClCG07G006240 Citrullus lanatus
COL.COLO4_16559 Corchorus olitorius
COL.COLO4_20478 Corchorus olitorius
Cpa.g.sc65.131 Carica papaya
CsaV3_5G013550 Cucumis sativus L.
CsaV3_UNG236440 Cucumis sativus L.
CSS0041256 Camellia sinensis var. sinensis
CSS0042578 Camellia sinensis var. sinensis
DCAR_007292 Daucus carota
Dinv07642 Davidia involucrata
Dinv12988 Davidia involucrata
Dinv12989 Davidia involucrata
Duzib248G1046 Durio zibethinus
Duzib251G0172 Durio zibethinus
ECA234G3105 Erigeron canadensis
EL10Ac5g12901 Beta vulgaris
Eucgr.H00672 Eucalyptus grandis
Eucgr.L01715 Eucalyptus grandis
FAN07G2052 Fragaria x ananassa
FAN12G3660 Fragaria x ananassa
FAN17G2802 Fragaria x ananassa
FAN22G1587 Fragaria x ananassa
FvH4_4g32390 Fragaria vesca
FvH4_6g52690 Fragaria vesca
Glyma.08G257000 Glycine max
Glyma.09G118400 Glycine max
Gohir.A01G152600 Gossypium hirsutum
Gohir.D01G145500 Gossypium hirsutum
Gorai.002G179700 Gossypium raimondii
GSVIVG01011761001 Vitis vinifera
HanXRQChr12g0377591 Helianthus annuus
Haze_11008 Corylus avellana
Hma1.2p1_0346F.1_g131330 Hydrangea macrophylla
Hma1.2p1_0346F.1_g131336 Hydrangea macrophylla
HPP92_008055 Vanilla planifolia
Lalb_Chr01g0007191 Lupinus albus
Lalb_Chr10g0096231 Lupinus albus
Lalb_Chr25g0280641 Lupinus albus
Lj1g0003353 Lotus japonicus
Lj2g0007524 Lotus japonicus
Lj3P873T10 Lonicera japonica
Lj6A746T53 Lonicera japonica
Lsat_1_v5_gn_4_14640 Lactuca sativa
Manes.12G111400 Manihot esculenta
Manes.12G111500 Manihot esculenta
Manes.14G087201 Manihot esculenta
Mapoly0139s0024 Marchantia polymorpha
MD13G1025700 Malus domestica
MD16G1028500 Malus domestica
Medtr1g030760 Medicago truncatula
Medtr3g070755 Medicago truncatula
Medtr3g070770 Medicago truncatula
Medtr5g012970 Medicago truncatula
Medtr6g021910 Medicago truncatula
Medtr7g020840 Medicago truncatula
MELO3C018333.2 Cucumis melo
Migut.E00421 Erythranthe guttata
MSTRG.13583 Avicennia marina
MSTRG.2173 Avicennia marina
Nitab4.5_0000742g0040 Nicotiana tabacum
Nitab4.5_0001832g0050 Nicotiana tabacum
Nitab4.5_0007576g0010 Nicotiana tabacum
Nn2g15268 Nelumbo nucifera
Nn3g18214 Nelumbo nucifera
Oeu045868.1 Olea europaea
Oeu059504.1 Olea europaea
Os01g0606133 Oryza sativa ssp. japonica
Peaxi162Scf00159g00034 Petunia axillaris
Peaxi162Scf00253g01313 Petunia axillaris
PGR119G1546 Punica granatum
PGSC0003DMG400005957 Solanum tuberosum
PGSC0003DMG400030500 Solanum tuberosum
Phvul.008G019900 Phaseolus vulgaris
Phvul.009G073100 Phaseolus vulgaris
Potri.001G156300 Populus trichocarpa
Potri.006G111600 Populus trichocarpa
Pp3c9_1890 Physcomitrium patens
Prupe.1G324200 Prunus persica
Psat0s10301g0080 Pisum sativum
Psat0s12802g0040 Pisum sativum
Psat0s1827g0080 Pisum sativum
Psat0s2696g0040 Pisum sativum
Psat0s2696g0080 Pisum sativum
Psat0s2696g0160 Pisum sativum
Psat0s2696g0200 Pisum sativum
Psat0s2696g0240 Pisum sativum
Psat0s4857g0040 Pisum sativum
Psat0s4857g0120 Pisum sativum
Psat0s6339g0160 Pisum sativum
Psat0s8196g0040 Pisum sativum
Psat3g190280 Pisum sativum
Psat6g042640 Pisum sativum
PSO017G4920 Papaver somniferum
PSO478G1363 Papaver somniferum
QL01p001776 Quercus lobata
Rhsim09G0097800 Rhododendron simsii
Sabra06G0086800 Salix brachista
SalBow1G2245 Salvia bowleyana
Sc04g0005490 Simmondsia chinensis
Sed0006623 Sechium edule
SEGI_06567 Sequoiadendron giganteum
SGA_v2.0_scaffold257G45678 Striga asiatica
SHI04655 Sapria himalayana
SMO340G0277 Selaginella moellendorffii
Solyc04g007660.1 Solanum lycopersicum
Sopen04g002750 Solanum pennellii
Sopen05g003980 Solanum pennellii
Sp2g12840 Schrenkiella parvula
TAR627G0040 Trochodendron aralioides
TAR627G0408 Trochodendron aralioides
TAR629G0314 Trochodendron aralioides
THA.LOC104805062 Tarenaya hassleriana
THA.LOC104824143 Tarenaya hassleriana
Thecc.02G281200 Theobroma cacao
Thhalv10001208m.g Eutrema salsugineum
TPR.G21639 Trifolium pratense
TPR.G36928 Trifolium pratense
TPR.G39266 Trifolium pratense
TPR.G39637 Trifolium pratense
TPR.G4489 Trifolium pratense
TWI81G0187 Tripterygium wilfordii
unitig_27.g25177 Utricularia gibba
unitig_29.g31872 Utricularia gibba
VMungo1309G2882 Vigna mungo
VMungo1383G0958 Vigna mungo
Zm00001eb161590 Zea mays
Zm00001eb357840 Zea mays

User provided reference genes

Program Settings